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The map label for this gene is secB [H]

Identifier: 50086126

GI number: 50086126

Start: 3050763

End: 3051218

Strand: Direct

Name: secB [H]

Synonym: ACIAD3122

Alternate gene names: 50086126

Gene position: 3050763-3051218 (Clockwise)

Preceding gene: 50086125

Following gene: 50086129

Centisome position: 84.78

GC content: 37.72

Gene sequence:

>456_bases
ATGAGTGAAGAACAACAAACTCAACCACAACTTGCTTTAGAACGTCTTTATACCAAAGATATTTCATTTGAAGTACCAGG
CCCGCAAGTGTTTACCAAACAATGGCAGCCTGAACTGAATATCAATTTATCTTCTTCTGCAGAAAAAATTGATCCAACAC
ATTTTGAAGTCTCTTTAAAAGTTGTGGTTCAAGCAAATAATGAAGGTGAGACTGCTTTTATTGTTGACGTAACTCAATCT
GGTATTTTCTTAATTGATAATATCGAAGAAGATCGCTTACCGTATATTTTAGGGGCTTACTGCCCGAATATCCTGTTCCC
GTTCTTACGTGAAGCAGTCAATGATATGGTAACGAAGGGAAGCTTCCCTCAATTACTTCTCACTCCAATCAATTTTGATG
CAGAGTTTGAAGCTAATCTTGAACGCGCTCAAACTGCAGTAGAAGGTCAAGCTTAA

Upstream 100 bases:

>100_bases
AGTTTATTGGCGGTTTTGATCAGCTTTATGCTTTAGAGCGTGATGGTAAACTCGACGAATTATTGGCTTAATCTCGCTTT
GTACAGTAAAGGAAAAAAGA

Downstream 100 bases:

>100_bases
AAGCTTAAATCTCCTACTTAAAAAGCTACCTCTCAAAGGTAGCTTTTTTTATATTGTTATTATTTGAATTTTTTATGATT
TACATTACGAATATCAAGTA

Product: preprotein translocase subunit SecB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 151; Mature: 150

Protein sequence:

>151_residues
MSEEQQTQPQLALERLYTKDISFEVPGPQVFTKQWQPELNINLSSSAEKIDPTHFEVSLKVVVQANNEGETAFIVDVTQS
GIFLIDNIEEDRLPYILGAYCPNILFPFLREAVNDMVTKGSFPQLLLTPINFDAEFEANLERAQTAVEGQA

Sequences:

>Translated_151_residues
MSEEQQTQPQLALERLYTKDISFEVPGPQVFTKQWQPELNINLSSSAEKIDPTHFEVSLKVVVQANNEGETAFIVDVTQS
GIFLIDNIEEDRLPYILGAYCPNILFPFLREAVNDMVTKGSFPQLLLTPINFDAEFEANLERAQTAVEGQA
>Mature_150_residues
SEEQQTQPQLALERLYTKDISFEVPGPQVFTKQWQPELNINLSSSAEKIDPTHFEVSLKVVVQANNEGETAFIVDVTQSG
IFLIDNIEEDRLPYILGAYCPNILFPFLREAVNDMVTKGSFPQLLLTPINFDAEFEANLERAQTAVEGQA

Specific function: One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its r

COG id: COG1952

COG function: function code U; Preprotein translocase subunit SecB

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the secB family [H]

Homologues:

Organism=Escherichia coli, GI1790038, Length=150, Percent_Identity=48.6666666666667, Blast_Score=147, Evalue=2e-37,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003708 [H]

Pfam domain/function: PF02556 SecB [H]

EC number: NA

Molecular weight: Translated: 16991; Mature: 16860

Theoretical pI: Translated: 3.95; Mature: 3.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEEQQTQPQLALERLYTKDISFEVPGPQVFTKQWQPELNINLSSSAEKIDPTHFEVSLK
CCCCHHCCHHHHHHHHHHCCCEEECCCCCEEHHCCCCCEEEEECCCCCCCCCCEEEEEEE
VVVQANNEGETAFIVDVTQSGIFLIDNIEEDRLPYILGAYCPNILFPFLREAVNDMVTKG
EEEEECCCCCEEEEEEECCCCEEEEECCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHCCC
SFPQLLLTPINFDAEFEANLERAQTAVEGQA
CCCEEEEEECCCCCCCCCCHHHHHHHHCCCC
>Mature Secondary Structure 
SEEQQTQPQLALERLYTKDISFEVPGPQVFTKQWQPELNINLSSSAEKIDPTHFEVSLK
CCCHHCCHHHHHHHHHHCCCEEECCCCCEEHHCCCCCEEEEECCCCCCCCCCEEEEEEE
VVVQANNEGETAFIVDVTQSGIFLIDNIEEDRLPYILGAYCPNILFPFLREAVNDMVTKG
EEEEECCCCCEEEEEEECCCCEEEEECCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHCCC
SFPQLLLTPINFDAEFEANLERAQTAVEGQA
CCCEEEEEECCCCCCCCCCHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA