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The map label for this gene is ybbI [C]

Identifier: 50085947

GI number: 50085947

Start: 2851532

End: 2851972

Strand: Reverse

Name: ybbI [C]

Synonym: ACIAD2920

Alternate gene names: 50085947

Gene position: 2851972-2851532 (Counterclockwise)

Preceding gene: 50085950

Following gene: 50085945

Centisome position: 79.25

GC content: 34.69

Gene sequence:

>441_bases
ATGAAAGAAATCACAATGTCAGAATTGGCGAGACAGACAGGATTGAAAAGTTCTGCGATTCGTTATTATGAAAAAGAAAA
ATTGATTCATCCAATTGGACGAAAAGGTTTACAACGTGTCTTTTCAATACAGATCATTGATCAGTTGGCACTAATTCACT
TGGCTAAGCAAGCTGGATTCTCAATCCAAGAAATCAGGAGCATGCTTGAAAAACCACAGTCACCGATTGATAAAAATCAA
TTAAAACAAAAAGCATTGCAAATTGAAGAAAAGATTGTAGAGATGAAGGTGTTAAGTAAGACTTTACGTCATGTGGCGCA
ATGTTCCTTTGATAATCCATTAAACTGCCCAAAATTTCAAAAAATCCTCTCAGCAGTCAAACGAGAGTGTTTAACCAATC
CACCGTTTATTGAAAAAAATATCTCTAAAAAATCGAGTTAG

Upstream 100 bases:

>100_bases
CCACATCCCACAAAAATAACTTCAAGTGCTTTCAATTTGGAATAATCCTGTTAGATTGAATCATTGTTAGTCTACAAATT
GAAGTGAACTTCAAGTCAAT

Downstream 100 bases:

>100_bases
CTTATCTTTTTTTATAAAATTTATGGTAAATCCACCAAACAGAAACCATCAAGGTGATTGCCAAAATCAAATAACCAACA
CGATGCATAATGCTAAACAT

Product: transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator MerR Family; Transcriptional Regulator; Cu(I)-Responsive Transcriptional Regulator; Regulatory Protein MerR; Transcriptional Regulator MerR Family Protein; Regulatory Protein; Redox-Sensitive Transcriptional Activator; MerR Family Regulatory Protein; MerR-Family Transcriptional Regulator; SoxR Family Transcriptional Regulator; Transcriptional Regulator Merr Family; MerR Family Regulatory Family

Number of amino acids: Translated: 146; Mature: 146

Protein sequence:

>146_residues
MKEITMSELARQTGLKSSAIRYYEKEKLIHPIGRKGLQRVFSIQIIDQLALIHLAKQAGFSIQEIRSMLEKPQSPIDKNQ
LKQKALQIEEKIVEMKVLSKTLRHVAQCSFDNPLNCPKFQKILSAVKRECLTNPPFIEKNISKKSS

Sequences:

>Translated_146_residues
MKEITMSELARQTGLKSSAIRYYEKEKLIHPIGRKGLQRVFSIQIIDQLALIHLAKQAGFSIQEIRSMLEKPQSPIDKNQ
LKQKALQIEEKIVEMKVLSKTLRHVAQCSFDNPLNCPKFQKILSAVKRECLTNPPFIEKNISKKSS
>Mature_146_residues
MKEITMSELARQTGLKSSAIRYYEKEKLIHPIGRKGLQRVFSIQIIDQLALIHLAKQAGFSIQEIRSMLEKPQSPIDKNQ
LKQKALQIEEKIVEMKVLSKTLRHVAQCSFDNPLNCPKFQKILSAVKRECLTNPPFIEKNISKKSS

Specific function: Copper responsive transcription regulator [C]

COG id: COG0789

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16745; Mature: 16745

Theoretical pI: Translated: 10.52; Mature: 10.52

Prosite motif: PS50937 HTH_MERR_2 ; PS00092 N6_MTASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKEITMSELARQTGLKSSAIRYYEKEKLIHPIGRKGLQRVFSIQIIDQLALIHLAKQAGF
CCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
SIQEIRSMLEKPQSPIDKNQLKQKALQIEEKIVEMKVLSKTLRHVAQCSFDNPLNCPKFQ
CHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHH
KILSAVKRECLTNPPFIEKNISKKSS
HHHHHHHHHHCCCCCCHHHCCCCCCC
>Mature Secondary Structure
MKEITMSELARQTGLKSSAIRYYEKEKLIHPIGRKGLQRVFSIQIIDQLALIHLAKQAGF
CCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
SIQEIRSMLEKPQSPIDKNQLKQKALQIEEKIVEMKVLSKTLRHVAQCSFDNPLNCPKFQ
CHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHH
KILSAVKRECLTNPPFIEKNISKKSS
HHHHHHHHHHCCCCCCHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA