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The map label for this gene is apl [H]

Identifier: 50085946

GI number: 50085946

Start: 2850928

End: 2851530

Strand: Direct

Name: apl [H]

Synonym: ACIAD2919

Alternate gene names: 50085946

Gene position: 2850928-2851530 (Clockwise)

Preceding gene: 50085944

Following gene: 50085948

Centisome position: 79.22

GC content: 39.8

Gene sequence:

>603_bases
ATGGAAAATTGGGTTATCCAGATCATTGAACGCTTAGGCTACCTTGGTATTGCTTTTTTAATGTTTCTAGACAATGTTTT
CCCTCCTATTCCCTCTGAAATCATCATGCCTAGCGCAGGCTATACAGCTTCCCGTGGGCAGCTTCAAATTATTGGGGTGA
TTGTTGCTGGAAGTTTGGGTTCAATCCTTGCTGCTGCAATTCTATATGCGCTTGGAAGACAAATTTCTCATGCCGCTTTG
TTTCGTTGGACAGATCGTTATGGCAAATATTTATTGATTCAAACTAAAGATTTACAAATAGCACTTGAATGGTTTGAAAA
GTATGGCCACCGTATTGTGTTTTTCGGTCGCATGATTCCTGCAGTACGTTCACTGATTAGCATCCCTGCGGGCATGAGCC
GTATGCCTTTTTGGAAGTTCATGCTGTATAGCAGCTTAGGAACGGTTATCTGGACAACATTTCTGGCTGGAGTGGGTTTT
TATTTCGGTGAAAATCAAGCATTCATGTTTAGCATTATGCATCGTGTTGGTTATTTGATTTTGGCAATCACCTTGATGGT
TTCTGTTTGGTGGATTTACCATAAATTTTATAAAAAAAGATAA

Upstream 100 bases:

>100_bases
ATTACAACATATCGAAAAACAGGTGTGATTTTTACATAAGCAATATGGGCAAATGTATTCATGCCCCTTAATATCATTTT
TATTTGACGACCAAACGTAT

Downstream 100 bases:

>100_bases
GCTAACTCGATTTTTTAGAGATATTTTTTTCAATAAACGGTGGATTGGTTAAACACTCTCGTTTGACTGCTGAGAGGATT
TTTTGAAATTTTGGGCAGTT

Product: DedA family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 200; Mature: 200

Protein sequence:

>200_residues
MENWVIQIIERLGYLGIAFLMFLDNVFPPIPSEIIMPSAGYTASRGQLQIIGVIVAGSLGSILAAAILYALGRQISHAAL
FRWTDRYGKYLLIQTKDLQIALEWFEKYGHRIVFFGRMIPAVRSLISIPAGMSRMPFWKFMLYSSLGTVIWTTFLAGVGF
YFGENQAFMFSIMHRVGYLILAITLMVSVWWIYHKFYKKR

Sequences:

>Translated_200_residues
MENWVIQIIERLGYLGIAFLMFLDNVFPPIPSEIIMPSAGYTASRGQLQIIGVIVAGSLGSILAAAILYALGRQISHAAL
FRWTDRYGKYLLIQTKDLQIALEWFEKYGHRIVFFGRMIPAVRSLISIPAGMSRMPFWKFMLYSSLGTVIWTTFLAGVGF
YFGENQAFMFSIMHRVGYLILAITLMVSVWWIYHKFYKKR
>Mature_200_residues
MENWVIQIIERLGYLGIAFLMFLDNVFPPIPSEIIMPSAGYTASRGQLQIIGVIVAGSLGSILAAAILYALGRQISHAAL
FRWTDRYGKYLLIQTKDLQIALEWFEKYGHRIVFFGRMIPAVRSLISIPAGMSRMPFWKFMLYSSLGTVIWTTFLAGVGF
YFGENQAFMFSIMHRVGYLILAITLMVSVWWIYHKFYKKR

Specific function: Unknown

COG id: COG0586

COG function: function code S; Uncharacterized membrane-associated protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dedA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015414 [H]

Pfam domain/function: PF09335 SNARE_assoc [H]

EC number: NA

Molecular weight: Translated: 22969; Mature: 22969

Theoretical pI: Translated: 10.25; Mature: 10.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MENWVIQIIERLGYLGIAFLMFLDNVFPPIPSEIIMPSAGYTASRGQLQIIGVIVAGSLG
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCCCCEEEEEEEECCCHH
SILAAAILYALGRQISHAALFRWTDRYGKYLLIQTKDLQIALEWFEKYGHRIVFFGRMIP
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHCCEEEEHHHHHH
AVRSLISIPAGMSRMPFWKFMLYSSLGTVIWTTFLAGVGFYFGENQAFMFSIMHRVGYLI
HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
LAITLMVSVWWIYHKFYKKR
HHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MENWVIQIIERLGYLGIAFLMFLDNVFPPIPSEIIMPSAGYTASRGQLQIIGVIVAGSLG
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCCCCEEEEEEEECCCHH
SILAAAILYALGRQISHAALFRWTDRYGKYLLIQTKDLQIALEWFEKYGHRIVFFGRMIP
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHCCEEEEHHHHHH
AVRSLISIPAGMSRMPFWKFMLYSSLGTVIWTTFLAGVGFYFGENQAFMFSIMHRVGYLI
HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
LAITLMVSVWWIYHKFYKKR
HHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11337471 [H]