| Definition | Acinetobacter sp. ADP1 chromosome, complete genome. |
|---|---|
| Accession | NC_005966 |
| Length | 3,598,621 |
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The map label for this gene is 50085935
Identifier: 50085935
GI number: 50085935
Start: 2840634
End: 2842337
Strand: Direct
Name: 50085935
Synonym: ACIAD2901
Alternate gene names: NA
Gene position: 2840634-2842337 (Clockwise)
Preceding gene: 50085933
Following gene: 50085936
Centisome position: 78.94
GC content: 40.14
Gene sequence:
>1704_bases ATGAATAACCGGTTCAACGGTACGTCCATTAAACAATATTCTACCACATTCTTGTTGCTAGGTAGCATGGCTTCCGCTGC CCATGTTCGAGCTGCGGATGAATTTCATCCAAATTCGTTTAATAGTGAAGCCCTCAAACAAAGCATGATTGCCGAGTTTG CACTGGCATATGACGATGTTCCAACTGCAATTCATAACTATACTGTACTCGCAATCAAAAGTAATTCAACCAGTATTAAA CAACGTGCCCTCGATATTGCACTTGAATACAATGACTTGAAAGCCGCACTTGATATTGCAACCCATTGGGTTGTACAAGA GCCTGAGGACGTTCCAGCAATGTTTTATTTGGCACATATTGCCTTACGCGCACATGAATATAAGCTCGCAGCAAATACAC TCGATAAAATTCTAAATATTGATCCTAATGCCGACCTGGAACAAATCCTGGCTGGAATTGCGCCAGAATCTAAAGAAGAT CGCGAAAACTTGCTTGAAACACTCAAAACCAGTAAAGAAAAAGAAAATCCTTCAATTCTGGTGATGATTGCTGGTCTTGA AGCACAAAATGGACATCTACAAGATGCACTAATCAATACAAACCGTGCTTTAAGAAAACGGCCCAAAGTGACAGGTTTTA TCTTGATGAAAGCCAATCTATTGATTGGTCTCAATGATATTGAGGGCGCACAAAAATGGTATGCCAAATCCAGTAAACGT CATCGTGATAATCTAGATATCCGTCTGGCAGAAGCACGTTTCTTAATTCGCCACAATGAATCAGAGCTGGCGCTGAAAAA ACTTGAAGACATTATCAAAACCTGGCCAGATGCCGAAGATGCCAAATTCATCGCAGGGCTAACCAGTATTGATTTGAAAC AGTATGAAAAAGCCGAACAATATCTGGTCGATCTGCGCTATTCTGCAAAGTATCAAAATGATGCCTATTATTATCTGGCC GTCAATGCAGAACGCAAACAGCATTTTGAGACAGCAAAAGCCTATTATCGCTTGGTCGACGGCAGCCTATACGTCGTTTC TAGACGCAATCTGGTGTCAATTTTTGAAAAGCAGGGTAATTTAAACGACGCCTTGCGTTTTTTGACACAAGAACGGGTCA ATTATCCACAGCATGCCAGTTTTCTCTATCAGGCACAGGCCGAAATTTTAAAAAAGACCGGAAATAAAAAAGCTGCTTTA CGCCTGCTGGATGAAGCTATAAAAAATATCTCTGATGATCCAGAACTTATTTATGCAGAAGTCTTATTACTCGATCCGTT CTCAGATCGAGATAAGCTAGATCGTACACTTAAACAGCTTCTATTGATTGAACCCAATAGTCCAACCTATTTGAATGCTT ACGCATACACCCTGGCCTTACAAAATCGACGCTTAGATGAAGCACGTCAGTATGCAGAACTTGCATTAGAATATGCACCT GAGCAGGCATCCATTCTGGATACTTTAGGCTATATTGCTTTTTTACAAAATGACTATGCAGCAGCAGCCACTTCATTAGG CAAAGCATACACGCTCAGCAATAACGTTAATATTGGAATACGTTTTGCTAAAGCCTTGTATATGCAAGGAAATCTCACAG AATTTAGCGAAGTGTTACAACAGCTCAAAGAAAAAAATGCAAATGATCCACAATTAAAACAGCTTGATGCGTTAATTTTA CCGACAGTGACTAAAAAGAGTTAA
Upstream 100 bases:
>100_bases CAAAGAAAGACATATCAGATCATCATTTCGCTAAATTTATGCTATTGTGCAATATCGGTGTCATAAAAAGCATTACTTGG ATTACTAAAAATTGCGACAA
Downstream 100 bases:
>100_bases TTTATGTTTAAAACATCTCAACTTTCAATCGCATTATGCTGTACAAGTGCTTTATTGTTTAGCGGCTGTCAACACATTAT AAAACCTCAGTCAGCACCGA
Product: signal peptide
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 567; Mature: 567
Protein sequence:
>567_residues MNNRFNGTSIKQYSTTFLLLGSMASAAHVRAADEFHPNSFNSEALKQSMIAEFALAYDDVPTAIHNYTVLAIKSNSTSIK QRALDIALEYNDLKAALDIATHWVVQEPEDVPAMFYLAHIALRAHEYKLAANTLDKILNIDPNADLEQILAGIAPESKED RENLLETLKTSKEKENPSILVMIAGLEAQNGHLQDALINTNRALRKRPKVTGFILMKANLLIGLNDIEGAQKWYAKSSKR HRDNLDIRLAEARFLIRHNESELALKKLEDIIKTWPDAEDAKFIAGLTSIDLKQYEKAEQYLVDLRYSAKYQNDAYYYLA VNAERKQHFETAKAYYRLVDGSLYVVSRRNLVSIFEKQGNLNDALRFLTQERVNYPQHASFLYQAQAEILKKTGNKKAAL RLLDEAIKNISDDPELIYAEVLLLDPFSDRDKLDRTLKQLLLIEPNSPTYLNAYAYTLALQNRRLDEARQYAELALEYAP EQASILDTLGYIAFLQNDYAAAATSLGKAYTLSNNVNIGIRFAKALYMQGNLTEFSEVLQQLKEKNANDPQLKQLDALIL PTVTKKS
Sequences:
>Translated_567_residues MNNRFNGTSIKQYSTTFLLLGSMASAAHVRAADEFHPNSFNSEALKQSMIAEFALAYDDVPTAIHNYTVLAIKSNSTSIK QRALDIALEYNDLKAALDIATHWVVQEPEDVPAMFYLAHIALRAHEYKLAANTLDKILNIDPNADLEQILAGIAPESKED RENLLETLKTSKEKENPSILVMIAGLEAQNGHLQDALINTNRALRKRPKVTGFILMKANLLIGLNDIEGAQKWYAKSSKR HRDNLDIRLAEARFLIRHNESELALKKLEDIIKTWPDAEDAKFIAGLTSIDLKQYEKAEQYLVDLRYSAKYQNDAYYYLA VNAERKQHFETAKAYYRLVDGSLYVVSRRNLVSIFEKQGNLNDALRFLTQERVNYPQHASFLYQAQAEILKKTGNKKAAL RLLDEAIKNISDDPELIYAEVLLLDPFSDRDKLDRTLKQLLLIEPNSPTYLNAYAYTLALQNRRLDEARQYAELALEYAP EQASILDTLGYIAFLQNDYAAAATSLGKAYTLSNNVNIGIRFAKALYMQGNLTEFSEVLQQLKEKNANDPQLKQLDALIL PTVTKKS >Mature_567_residues MNNRFNGTSIKQYSTTFLLLGSMASAAHVRAADEFHPNSFNSEALKQSMIAEFALAYDDVPTAIHNYTVLAIKSNSTSIK QRALDIALEYNDLKAALDIATHWVVQEPEDVPAMFYLAHIALRAHEYKLAANTLDKILNIDPNADLEQILAGIAPESKED RENLLETLKTSKEKENPSILVMIAGLEAQNGHLQDALINTNRALRKRPKVTGFILMKANLLIGLNDIEGAQKWYAKSSKR HRDNLDIRLAEARFLIRHNESELALKKLEDIIKTWPDAEDAKFIAGLTSIDLKQYEKAEQYLVDLRYSAKYQNDAYYYLA VNAERKQHFETAKAYYRLVDGSLYVVSRRNLVSIFEKQGNLNDALRFLTQERVNYPQHASFLYQAQAEILKKTGNKKAAL RLLDEAIKNISDDPELIYAEVLLLDPFSDRDKLDRTLKQLLLIEPNSPTYLNAYAYTLALQNRRLDEARQYAELALEYAP EQASILDTLGYIAFLQNDYAAAATSLGKAYTLSNNVNIGIRFAKALYMQGNLTEFSEVLQQLKEKNANDPQLKQLDALIL PTVTKKS
Specific function: Unknown
COG id: COG0457
COG function: function code R; FOG: TPR repeat
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 5 TPR repeats [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011717 - InterPro: IPR013026 - InterPro: IPR011990 - InterPro: IPR013105 - InterPro: IPR019734 [H]
Pfam domain/function: PF07719 TPR_2; PF07721 TPR_4 [H]
EC number: NA
Molecular weight: Translated: 64205; Mature: 64205
Theoretical pI: Translated: 6.46; Mature: 6.46
Prosite motif: PS50005 TPR ; PS50293 TPR_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNNRFNGTSIKQYSTTFLLLGSMASAAHVRAADEFHPNSFNSEALKQSMIAEFALAYDDV CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCC PTAIHNYTVLAIKSNSTSIKQRALDIALEYNDLKAALDIATHWVVQEPEDVPAMFYLAHI CHHHHCEEEEEEECCCCHHHHHHHHEEEEHHHHHHHHHHHHHHEECCCCCCHHHHHHHHH ALRAHEYKLAANTLDKILNIDPNADLEQILAGIAPESKEDRENLLETLKTSKEKENPSIL HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCEE VMIAGLEAQNGHLQDALINTNRALRKRPKVTGFILMKANLLIGLNDIEGAQKWYAKSSKR EEEECCCCCCCCHHHHHHCCCHHHHHCCCCEEEEEEEECEEEEECCCCHHHHHHHHCCCC HRDNLDIRLAEARFLIRHNESELALKKLEDIIKTWPDAEDAKFIAGLTSIDLKQYEKAEQ CCCCCCEEEEEEEEEEECCCHHHHHHHHHHHHHHCCCCCCCHHHHCHHHHHHHHHHHHHH YLVDLRYSAKYQNDAYYYLAVNAERKQHFETAKAYYRLVDGSLYVVSRRNLVSIFEKQGN HHHHHHHCCEECCCEEEEEEEECHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHCCC LNDALRFLTQERVNYPQHASFLYQAQAEILKKTGNKKAALRLLDEAIKNISDDPELIYAE HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCEEEEE VLLLDPFSDRDKLDRTLKQLLLIEPNSPTYLNAYAYTLALQNRRLDEARQYAELALEYAP EEEECCCCCHHHHHHHHHHHEEECCCCCCEEEHEEEEEEHHHCCHHHHHHHHHHHHHHCC EQASILDTLGYIAFLQNDYAAAATSLGKAYTLSNNVNIGIRFAKALYMQGNLTEFSEVLQ CHHHHHHHHHHHHHHHCCHHHHHHHCCCEEEECCCCEEEEEEEEHHHCCCCHHHHHHHHH QLKEKNANDPQLKQLDALILPTVTKKS HHHHCCCCCCHHHHHHHHHCCCCCCCC >Mature Secondary Structure MNNRFNGTSIKQYSTTFLLLGSMASAAHVRAADEFHPNSFNSEALKQSMIAEFALAYDDV CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCC PTAIHNYTVLAIKSNSTSIKQRALDIALEYNDLKAALDIATHWVVQEPEDVPAMFYLAHI CHHHHCEEEEEEECCCCHHHHHHHHEEEEHHHHHHHHHHHHHHEECCCCCCHHHHHHHHH ALRAHEYKLAANTLDKILNIDPNADLEQILAGIAPESKEDRENLLETLKTSKEKENPSIL HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCEE VMIAGLEAQNGHLQDALINTNRALRKRPKVTGFILMKANLLIGLNDIEGAQKWYAKSSKR EEEECCCCCCCCHHHHHHCCCHHHHHCCCCEEEEEEEECEEEEECCCCHHHHHHHHCCCC HRDNLDIRLAEARFLIRHNESELALKKLEDIIKTWPDAEDAKFIAGLTSIDLKQYEKAEQ CCCCCCEEEEEEEEEEECCCHHHHHHHHHHHHHHCCCCCCCHHHHCHHHHHHHHHHHHHH YLVDLRYSAKYQNDAYYYLAVNAERKQHFETAKAYYRLVDGSLYVVSRRNLVSIFEKQGN HHHHHHHCCEECCCEEEEEEEECHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHCCC LNDALRFLTQERVNYPQHASFLYQAQAEILKKTGNKKAALRLLDEAIKNISDDPELIYAE HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCEEEEE VLLLDPFSDRDKLDRTLKQLLLIEPNSPTYLNAYAYTLALQNRRLDEARQYAELALEYAP EEEECCCCCHHHHHHHHHHHEEECCCCCCEEEHEEEEEEHHHCCHHHHHHHHHHHHHHCC EQASILDTLGYIAFLQNDYAAAATSLGKAYTLSNNVNIGIRFAKALYMQGNLTEFSEVLQ CHHHHHHHHHHHHHHHCCHHHHHHHCCCEEEECCCCEEEEEEEEHHHCCCCHHHHHHHHH QLKEKNANDPQLKQLDALILPTVTKKS HHHHCCCCCCHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7883699; 10984043 [H]