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The map label for this gene is yfiO [C]

Identifier: 50085932

GI number: 50085932

Start: 2836153

End: 2837208

Strand: Direct

Name: yfiO [C]

Synonym: ACIAD2898

Alternate gene names: 50085932

Gene position: 2836153-2837208 (Clockwise)

Preceding gene: 50085928

Following gene: 50085933

Centisome position: 78.81

GC content: 42.8

Gene sequence:

>1056_bases
ATGTCGCTACCACAATATAAGATTACCATGCTTGCCCTTTCTCTTGGCGTAGCGGCTGCAATGGTGGGCTGTAGCAGTAA
TCCCAAAAAAGAAGTAGTCGATACAGGCCCTCAGTCAAGTGAACAAATTTACTTCCAAAAAGCAGAGAAAGCACTTGATC
GTGGACAATATACAGAAGCCGCTAAATCTTTAGAAGCGATAGATACATATTACCCAACAGGCCAGTATGCTGCTCAAGCA
CAGCTTGATCTACTTTATGTCAAGTTTCAGCAAAAAGAATATGAAACGGTTGTTTCTCAGGCGGATCGTTTTATTCGTTT
AAATCCACAACATCCGAATATTGACTATGTTTATTACATTCGCGGTGTAGCCAATATGGAACTGAATTACGACAGTTTGA
TGCGTTATACTTCGCTTCAACAATCACATCGTGATACCAGCTATATGAAGCTGGCTTATCAGAATTTTGTAGATCTGATC
CGTCGCTTTCCAAGTAGTCCATATTCAGTAGATGCCGCTCAACGGATGAAATTTATTGGACAAGAGCTTGCAGAAAGTGA
AATGAATGTGGCGCGTTTTAATATCAAACGTAAAGCATGGGTTGCTGCGATTGATCGTGCACAATGGGTTGTAGAACATT
TCCCACAAACACCTCAGACACCAGAAGCACTTGCAACTTTAGCTTATGCATACAATGAATTAGGTGATCAGGCAACTTCA
CAACAATATGTGAATTTGTTAAAGCTAAATTATCCAGATCTTGTACGTGCCAACGGTACGGTCAACTTGCGTGCTGCTCG
TCATGATGCGAGCTGGGTCAATCGCGCTACTTTGGGTATTTTTGGTCGTGAAGCTCAAGCCAATGCGTCGCGTGATAGTA
GCAATACCACCCCAGAAAGTGATGATAAACGTAGTTGGACCAATCGCCTAAGTTTGGGATTATTGGACAAACCAGCAGCT
CAAACCCAGCACACACCAGCCGAAATTCCAAAGCCACCAGTGCAAAGTAGCTCGCAAAATACACAAAACACTGATGGGGC
TGATGCTGCCAAATAA

Upstream 100 bases:

>100_bases
TAGTATTAGAAGATTGTGCTGAAGTCATTTGCTCATTGAGATAAAAGTGGTTTAATAGCGCAATTGTAGCTCATTGCCCG
TATTAAACAGAGGAGTTTTT

Downstream 100 bases:

>100_bases
ACCAGATCAGTGATTATCAATAAAAAAGGGCAGGTTTAATACCTGCCTTTTTATTTTTGCTTACGATCAAAATTCTTTTT
TGGCTTTTCATCATATACAC

Product: competence protein (ComL)

Products: NA

Alternate protein names: ORFY [H]

Number of amino acids: Translated: 351; Mature: 350

Protein sequence:

>351_residues
MSLPQYKITMLALSLGVAAAMVGCSSNPKKEVVDTGPQSSEQIYFQKAEKALDRGQYTEAAKSLEAIDTYYPTGQYAAQA
QLDLLYVKFQQKEYETVVSQADRFIRLNPQHPNIDYVYYIRGVANMELNYDSLMRYTSLQQSHRDTSYMKLAYQNFVDLI
RRFPSSPYSVDAAQRMKFIGQELAESEMNVARFNIKRKAWVAAIDRAQWVVEHFPQTPQTPEALATLAYAYNELGDQATS
QQYVNLLKLNYPDLVRANGTVNLRAARHDASWVNRATLGIFGREAQANASRDSSNTTPESDDKRSWTNRLSLGLLDKPAA
QTQHTPAEIPKPPVQSSSQNTQNTDGADAAK

Sequences:

>Translated_351_residues
MSLPQYKITMLALSLGVAAAMVGCSSNPKKEVVDTGPQSSEQIYFQKAEKALDRGQYTEAAKSLEAIDTYYPTGQYAAQA
QLDLLYVKFQQKEYETVVSQADRFIRLNPQHPNIDYVYYIRGVANMELNYDSLMRYTSLQQSHRDTSYMKLAYQNFVDLI
RRFPSSPYSVDAAQRMKFIGQELAESEMNVARFNIKRKAWVAAIDRAQWVVEHFPQTPQTPEALATLAYAYNELGDQATS
QQYVNLLKLNYPDLVRANGTVNLRAARHDASWVNRATLGIFGREAQANASRDSSNTTPESDDKRSWTNRLSLGLLDKPAA
QTQHTPAEIPKPPVQSSSQNTQNTDGADAAK
>Mature_350_residues
SLPQYKITMLALSLGVAAAMVGCSSNPKKEVVDTGPQSSEQIYFQKAEKALDRGQYTEAAKSLEAIDTYYPTGQYAAQAQ
LDLLYVKFQQKEYETVVSQADRFIRLNPQHPNIDYVYYIRGVANMELNYDSLMRYTSLQQSHRDTSYMKLAYQNFVDLIR
RFPSSPYSVDAAQRMKFIGQELAESEMNVARFNIKRKAWVAAIDRAQWVVEHFPQTPQTPEALATLAYAYNELGDQATSQ
QYVNLLKLNYPDLVRANGTVNLRAARHDASWVNRATLGIFGREAQANASRDSSNTTPESDDKRSWTNRLSLGLLDKPAAQ
TQHTPAEIPKPPVQSSSQNTQNTDGADAAK

Specific function: Unknown

COG id: COG4105

COG function: function code R; DNA uptake lipoprotein

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0169 (ComL) family [H]

Homologues:

Organism=Escherichia coli, GI1788947, Length=250, Percent_Identity=36, Blast_Score=163, Evalue=2e-41,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017689 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39444; Mature: 39313

Theoretical pI: Translated: 7.67; Mature: 7.67

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLPQYKITMLALSLGVAAAMVGCSSNPKKEVVDTGPQSSEQIYFQKAEKALDRGQYTEA
CCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHCCHHHHH
AKSLEAIDTYYPTGQYAAQAQLDLLYVKFQQKEYETVVSQADRFIRLNPQHPNIDYVYYI
HHHHHHHHHCCCCCCHHHHHHEEEEEEEHHHHHHHHHHHHCCCEEEECCCCCCCCEEEEE
RGVANMELNYDSLMRYTSLQQSHRDTSYMKLAYQNFVDLIRRFPSSPYSVDAAQRMKFIG
EEEECCEECHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH
QELAESEMNVARFNIKRKAWVAAIDRAQWVVEHFPQTPQTPEALATLAYAYNELGDQATS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCHHHH
QQYVNLLKLNYPDLVRANGTVNLRAARHDASWVNRATLGIFGREAQANASRDSSNTTPES
HHHHHHHHCCCCCCEECCCEEEEEEECCCHHHHHHHHHHEECCCCCCCCCCCCCCCCCCC
DDKRSWTNRLSLGLLDKPAAQTQHTPAEIPKPPVQSSSQNTQNTDGADAAK
CHHHHHHHHHHCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SLPQYKITMLALSLGVAAAMVGCSSNPKKEVVDTGPQSSEQIYFQKAEKALDRGQYTEA
CCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHCCHHHHH
AKSLEAIDTYYPTGQYAAQAQLDLLYVKFQQKEYETVVSQADRFIRLNPQHPNIDYVYYI
HHHHHHHHHCCCCCCHHHHHHEEEEEEEHHHHHHHHHHHHCCCEEEECCCCCCCCEEEEE
RGVANMELNYDSLMRYTSLQQSHRDTSYMKLAYQNFVDLIRRFPSSPYSVDAAQRMKFIG
EEEECCEECHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH
QELAESEMNVARFNIKRKAWVAAIDRAQWVVEHFPQTPQTPEALATLAYAYNELGDQATS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCHHHH
QQYVNLLKLNYPDLVRANGTVNLRAARHDASWVNRATLGIFGREAQANASRDSSNTTPES
HHHHHHHHCCCCCCEECCCEEEEEEECCCHHHHHHHHHHEECCCCCCCCCCCCCCCCCCC
DDKRSWTNRLSLGLLDKPAAQTQHTPAEIPKPPVQSSSQNTQNTDGADAAK
CHHHHHHHHHHCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8097014; 10984043 [H]