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The map label for this gene is ybeQ [H]

Identifier: 50085803

GI number: 50085803

Start: 2686895

End: 2687617

Strand: Direct

Name: ybeQ [H]

Synonym: ACIAD2745

Alternate gene names: 50085803

Gene position: 2686895-2687617 (Clockwise)

Preceding gene: 50085802

Following gene: 50085806

Centisome position: 74.66

GC content: 43.29

Gene sequence:

>723_bases
TTGCAGATCATTGTGACCATCATTATGCGCAAAAGAATGTTTCCAATTACACTGATCATATCTCTAAGCATTGGGTTGAT
CAGCTTTCAAACTTACGCCGAGCCTACCCTCAGCGACATCAAACAAATGGCGGCACAAGGCAAATCTACGGCACAATATC
ATCTTGGCATGATGTATTTAAGTGGTGAACAAGGCGTCACCAAAGATACAACTCAGGCGCTTAAATGGCTCACGCTTGCC
GATCAAAATGGTAGCGTAGGTGCTAAATATAGCTTGGGTTTGATGTATATGACAGGAACGGGGGTATCTCAAAATCAATC
CACTGCATTTGAATGGTTCAGTAAAGCTGCAAAGTTTGGACATGCTCAAGCACAATATACCGTCGGACGCATGTACAGTG
AAGGTGTAGGCGTTGAAAAAAATATGCCTCAAGCATTTGAATGGATTCAAAAAGCAGCGTTGCAGGGTTATCCTCCTGCG
GAATTTAGTCTGGGCTTAATGTACAACGATGGCCGTGGTGTTGCCCAGAATAAACAGCAAGCCATCAAGTGGTATACTCA
AGCCGCAGAACATCAGCAAAGTAATGCTCAATATAACCTTGGCATCATGTATCTGAACGGCGAAGGGACTTCTAAAAACC
CACCTCTAGCCAAAAAATGGTTACAACGCGCTGCCAATGCAGGCGATCAAGATGCAAAAGATGTATTAAAAGGATTAAAA
TGA

Upstream 100 bases:

>100_bases
ATCTAAGTACTTTAATCCTCTCTTGGATCGCCTGATCCAGTGGTTTTGTTGACCGAACGATCATTGAGTTTGCAAGAATT
TATCTCTAGAGTTAAATGCA

Downstream 100 bases:

>100_bases
CATGCACTGAATCAAGATAATATGTCGGATCTAGTGATCTGCTGTCAGCCGAGTTATCCATGTACTTGTTTCAGTTTAAG
CCCAAATCACCATAATCGCG

Product: signal peptide

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 240; Mature: 240

Protein sequence:

>240_residues
MQIIVTIIMRKRMFPITLIISLSIGLISFQTYAEPTLSDIKQMAAQGKSTAQYHLGMMYLSGEQGVTKDTTQALKWLTLA
DQNGSVGAKYSLGLMYMTGTGVSQNQSTAFEWFSKAAKFGHAQAQYTVGRMYSEGVGVEKNMPQAFEWIQKAALQGYPPA
EFSLGLMYNDGRGVAQNKQQAIKWYTQAAEHQQSNAQYNLGIMYLNGEGTSKNPPLAKKWLQRAANAGDQDAKDVLKGLK

Sequences:

>Translated_240_residues
MQIIVTIIMRKRMFPITLIISLSIGLISFQTYAEPTLSDIKQMAAQGKSTAQYHLGMMYLSGEQGVTKDTTQALKWLTLA
DQNGSVGAKYSLGLMYMTGTGVSQNQSTAFEWFSKAAKFGHAQAQYTVGRMYSEGVGVEKNMPQAFEWIQKAALQGYPPA
EFSLGLMYNDGRGVAQNKQQAIKWYTQAAEHQQSNAQYNLGIMYLNGEGTSKNPPLAKKWLQRAANAGDQDAKDVLKGLK
>Mature_240_residues
MQIIVTIIMRKRMFPITLIISLSIGLISFQTYAEPTLSDIKQMAAQGKSTAQYHLGMMYLSGEQGVTKDTTQALKWLTLA
DQNGSVGAKYSLGLMYMTGTGVSQNQSTAFEWFSKAAKFGHAQAQYTVGRMYSEGVGVEKNMPQAFEWIQKAALQGYPPA
EFSLGLMYNDGRGVAQNKQQAIKWYTQAAEHQQSNAQYNLGIMYLNGEGTSKNPPLAKKWLQRAANAGDQDAKDVLKGLK

Specific function: Unknown

COG id: COG0790

COG function: function code R; FOG: TPR repeat, SEL1 subfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ybeT [H]

Homologues:

Organism=Homo sapiens, GI151301150, Length=178, Percent_Identity=36.5168539325843, Blast_Score=107, Evalue=1e-23,
Organism=Homo sapiens, GI19923669, Length=187, Percent_Identity=33.6898395721925, Blast_Score=96, Evalue=2e-20,
Organism=Homo sapiens, GI154689719, Length=206, Percent_Identity=28.6407766990291, Blast_Score=64, Evalue=8e-11,
Organism=Escherichia coli, GI87081769, Length=197, Percent_Identity=37.5634517766497, Blast_Score=116, Evalue=2e-27,
Organism=Escherichia coli, GI1786867, Length=118, Percent_Identity=38.135593220339, Blast_Score=82, Evalue=4e-17,
Organism=Caenorhabditis elegans, GI17563256, Length=211, Percent_Identity=28.436018957346, Blast_Score=81, Evalue=5e-16,
Organism=Saccharomyces cerevisiae, GI6319998, Length=214, Percent_Identity=28.5046728971963, Blast_Score=65, Evalue=1e-11,
Organism=Saccharomyces cerevisiae, GI6319410, Length=211, Percent_Identity=27.9620853080569, Blast_Score=64, Evalue=2e-11,
Organism=Drosophila melanogaster, GI21355295, Length=189, Percent_Identity=31.7460317460317, Blast_Score=92, Evalue=2e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006597
- InterPro:   IPR011990 [H]

Pfam domain/function: PF08238 Sel1 [H]

EC number: NA

Molecular weight: Translated: 26485; Mature: 26485

Theoretical pI: Translated: 9.84; Mature: 9.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQIIVTIIMRKRMFPITLIISLSIGLISFQTYAEPTLSDIKQMAAQGKSTAQYHLGMMYL
CHHEEEEHHHCCCCCEEEEEEHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCEEEEEEEEE
SGEQGVTKDTTQALKWLTLADQNGSVGAKYSLGLMYMTGTGVSQNQSTAFEWFSKAAKFG
ECCCCCCHHHHHHHHHHEEECCCCCCCCEEEEEEEEEECCCCCCCCHHHHHHHHHHHHCC
HAQAQYTVGRMYSEGVGVEKNMPQAFEWIQKAALQGYPPAEFSLGLMYNDGRGVAQNKQQ
CCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCHHHHHH
AIKWYTQAAEHQQSNAQYNLGIMYLNGEGTSKNPPLAKKWLQRAANAGDQDAKDVLKGLK
HHHHHHHHHHHHHCCCEEEEEEEEECCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHCCC
>Mature Secondary Structure
MQIIVTIIMRKRMFPITLIISLSIGLISFQTYAEPTLSDIKQMAAQGKSTAQYHLGMMYL
CHHEEEEHHHCCCCCEEEEEEHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCEEEEEEEEE
SGEQGVTKDTTQALKWLTLADQNGSVGAKYSLGLMYMTGTGVSQNQSTAFEWFSKAAKFG
ECCCCCCHHHHHHHHHHEEECCCCCCCCEEEEEEEEEECCCCCCCCHHHHHHHHHHHHCC
HAQAQYTVGRMYSEGVGVEKNMPQAFEWIQKAALQGYPPAEFSLGLMYNDGRGVAQNKQQ
CCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCHHHHHH
AIKWYTQAAEHQQSNAQYNLGIMYLNGEGTSKNPPLAKKWLQRAANAGDQDAKDVLKGLK
HHHHHHHHHHHHHCCCEEEEEEEEECCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]