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The map label for this gene is yahN [H]

Identifier: 50085802

GI number: 50085802

Start: 2686126

End: 2686767

Strand: Direct

Name: yahN [H]

Synonym: ACIAD2743

Alternate gene names: 50085802

Gene position: 2686126-2686767 (Clockwise)

Preceding gene: 50085791

Following gene: 50085803

Centisome position: 74.64

GC content: 39.41

Gene sequence:

>642_bases
ATGCTTGCTCAATACTGGCCAGAGTTTTTAAGTTTGGCAATTGTCCATTTTCTTGCGGTCATTTTACCTGGACCAGACTT
TGCGATTACGGTTCGACAAAGCATGCGTTATGGTCATGTCATTGGATGTCTTACTGCATTGGGCATTGGTCTGGGCATTT
CTGTACATGTACTGTATACCCTGATTGGTATCGGGTTATTTATTCAAAAACATGAATGGCTGATGTTTGGTTTTAAAATT
GCAGGTGCAGCTTACTTGTGCTATCTGGGGTGGACACTTTTAAAAAGCCAGGGTTCAGCTCAACCTGCGATGTGGGAAGA
AGACATAATGCCAAAAGATTCCATAAGTAAATTCAAGGCATTGAGTACAGGATTTATGACCAATGCACTGAATCCCAAAG
CGACTGTTTTTTTTCTTGCAATTTTTACCAGTTTGGTCAGTGCACAAACCCCATTAAAAATTCAAATTTTCTATGGTGTC
TGGATGTGTATGGTCAATGCAGTATGGTTCATATTGGTCAGTTTGCTTTTTTCTCAAAGCAGGATTCGTCAGGCATTTTT
AAAGAAAGAATCTTTGATTGAACGAAGCATTGGAGTAGTGTTACTCGGAATGGCCTGCAAATTAGTTTTTACTTCAATCT
GA

Upstream 100 bases:

>100_bases
TTTGTGCTCATGACGCAAAAATGATTTGATTTTTTACTAGATTATCACCATTGCATTACTTTCTTAAACTATTGGAAGAA
TTATTGTTAGGGCTGAATCG

Downstream 100 bases:

>100_bases
TAGCAGTAATCCCAATTCTATAAGTTGATCTAAGTACTTTAATCCTCTCTTGGATCGCCTGATCCAGTGGTTTTGTTGAC
CGAACGATCATTGAGTTTGC

Product: amino acid efflux transmembrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 213; Mature: 213

Protein sequence:

>213_residues
MLAQYWPEFLSLAIVHFLAVILPGPDFAITVRQSMRYGHVIGCLTALGIGLGISVHVLYTLIGIGLFIQKHEWLMFGFKI
AGAAYLCYLGWTLLKSQGSAQPAMWEEDIMPKDSISKFKALSTGFMTNALNPKATVFFLAIFTSLVSAQTPLKIQIFYGV
WMCMVNAVWFILVSLLFSQSRIRQAFLKKESLIERSIGVVLLGMACKLVFTSI

Sequences:

>Translated_213_residues
MLAQYWPEFLSLAIVHFLAVILPGPDFAITVRQSMRYGHVIGCLTALGIGLGISVHVLYTLIGIGLFIQKHEWLMFGFKI
AGAAYLCYLGWTLLKSQGSAQPAMWEEDIMPKDSISKFKALSTGFMTNALNPKATVFFLAIFTSLVSAQTPLKIQIFYGV
WMCMVNAVWFILVSLLFSQSRIRQAFLKKESLIERSIGVVLLGMACKLVFTSI
>Mature_213_residues
MLAQYWPEFLSLAIVHFLAVILPGPDFAITVRQSMRYGHVIGCLTALGIGLGISVHVLYTLIGIGLFIQKHEWLMFGFKI
AGAAYLCYLGWTLLKSQGSAQPAMWEEDIMPKDSISKFKALSTGFMTNALNPKATVFFLAIFTSLVSAQTPLKIQIFYGV
WMCMVNAVWFILVSLLFSQSRIRQAFLKKESLIERSIGVVLLGMACKLVFTSI

Specific function: Unknown

COG id: COG1280

COG function: function code E; Putative threonine efflux protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rht family [H]

Homologues:

Organism=Escherichia coli, GI1786522, Length=191, Percent_Identity=25.130890052356, Blast_Score=84, Evalue=8e-18,
Organism=Escherichia coli, GI48994978, Length=210, Percent_Identity=26.1904761904762, Blast_Score=82, Evalue=3e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004778
- InterPro:   IPR001123 [H]

Pfam domain/function: PF01810 LysE [H]

EC number: NA

Molecular weight: Translated: 23726; Mature: 23726

Theoretical pI: Translated: 9.66; Mature: 9.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLAQYWPEFLSLAIVHFLAVILPGPDFAITVRQSMRYGHVIGCLTALGIGLGISVHVLYT
CCHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
LIGIGLFIQKHEWLMFGFKIAGAAYLCYLGWTLLKSQGSAQPAMWEEDIMPKDSISKFKA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCHHHHHHHHH
LSTGFMTNALNPKATVFFLAIFTSLVSAQTPLKIQIFYGVWMCMVNAVWFILVSLLFSQS
HHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHH
RIRQAFLKKESLIERSIGVVLLGMACKLVFTSI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLAQYWPEFLSLAIVHFLAVILPGPDFAITVRQSMRYGHVIGCLTALGIGLGISVHVLYT
CCHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
LIGIGLFIQKHEWLMFGFKIAGAAYLCYLGWTLLKSQGSAQPAMWEEDIMPKDSISKFKA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCHHHHHHHHH
LSTGFMTNALNPKATVFFLAIFTSLVSAQTPLKIQIFYGVWMCMVNAVWFILVSLLFSQS
HHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHH
RIRQAFLKKESLIERSIGVVLLGMACKLVFTSI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]