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The map label for this gene is clpV1 [H]

Identifier: 50085759

GI number: 50085759

Start: 2650125

End: 2652809

Strand: Direct

Name: clpV1 [H]

Synonym: ACIAD2694

Alternate gene names: 50085759

Gene position: 2650125-2652809 (Clockwise)

Preceding gene: 50085739

Following gene: 50085760

Centisome position: 73.64

GC content: 39.03

Gene sequence:

>2685_bases
TTGAGATTTATGATGAGCAATTTAAAAATTCTAATTACCAAATTATCGGGTAACTCTCGGACAGCATTAGAAAAATCTGC
AAATTCATGTATTTTGTTACAAAACTTTGAAATAGAAATAGAACATCTGTTTTTGGAATTACTAAATCAGAATAGTTCAA
ATGATATACAGATTTTACTAAAAAAATACAAAATTAATACTGAGGAGTTGATAGAGGATTTAAACAGGGCTCTATCTAGC
CTGCCTAAAGGCAATAATCGTACCCCTATTTTTTCTAAATCGATTGTAAGATTATTGGAACAAGCATGGTTACTTGCCTC
TGCAGATCAAAACCCAATTATCCGAAGTGGACATTTACTAATTGCTTTATTAACAGCACCAGATCTTTATCAGATTGCCG
TACGCGCATCTGATTTATTCGATGTTTTACCTATTGATTTAATGAAACATAAGTTTATTGAAGATTGTATAAAAAGCGTA
GAAAATGCTCAGTTACAACAAGATGAAAATCCAGTATCTCAACAGGCTTCAATAGAAACTAAAAATAAAACACCTGCCTT
GGATCAATTCACTATTAATCTTACTGAAAAAGCAAAAAGTGGTTCGATTGATCCTGTTATTGGACGCGAATACGAGATTC
GACTGATGCTCGATATTCTAATGCGTAGAAGACAAAATAACCCTATTCTGACAGGTGAGCCAGGGGTTGGAAAAACGGCT
GTCGTTGAAGGTTTAGCTCTGAAAATTGCTCAGGGTCTTGTACCTCCAGCTTTAAGAAATGTGCAGCTTCACAGTTTAGA
TATTGGTTTATTACAAGCAGGAGCCAGTGTCAAAGGTGAATTTGAAAACCGTCTAAAACAAGTTATTCAAGAAGTACAAT
CTTCTACTCATCCTATTATTTTGTTTATTGATGAAGCTCATACGTTAATTGGTGCAGGTGGTCAAGCAGGTCAGAATGAT
GCAGCTAATTTATTAAAACCAGCGCTGGCACGCGGTGAGCTGCGCACTATTGCGGCAACAACATGGGCCGAATATAAACA
ATATTTTGAAAAAGATGCCGCGCTGAGTCGTCGTTTTCAAGTCGTCAAGGTTGAAGAGCCAACCGAAACTGTTGCAATTG
ATATGCTACGGGCCATGATTCCGGTAATGCAGCAACATTTTAAACTACAAATAGACGATGAGGCCATCATTACAGCAGTA
CATGCTTCTCATCGCTATATCAGTGGGCGACAGCTTCCAGACAAGGCCATTAGTGTACTCGATACAGCAGCAGCCAGAGT
CGCATTGACCCAAAATGCGCAACCCGTGAAGCTGGATCAGTTACAAGCCAAGCTACACAATCTAAAACTCGAACAAAACA
TTCTAGACACTGAACATCGCCATTCTTCTATGCATGAAGAACGCCTGACCAAACTTGCCAAAGAAATTAGCCAGCTTGAA
GAAAATATCGATGAAGTCTATAAACGCTGGCAACAAGAACGAGAGCTCGTTCAAAAAATTCAAAATATTGAAATAAATAC
AGATGCTCCTGAGACAGCAGATGATCAACAAATAAATGAATTAAGATCCGAGCTTTATCAATTACAGGGTCATGAACCGC
TAGTCTTTGAGCGAGTTAATGCTCAGATGATTAATGAAATTATTTCTGACTGGACAGGTATTCCTATTGGAAATATGGTG
AATGATGAAATCCAGCATATCTTACAACTTGAACAAAAACTTGCTCAGCGCGTAATGGGACAAGATTATGCGTTACAGCA
ACTGGTTCAAGGTATCAAAACATCTAAAGCCAAACTTGAAGATCCCAATAAACCTCAAGGTGTATTTTTACTGGTTGGCC
CAAGTGGCGTGGGTAAAACAGAAACAGCTTTAGCCTTGGCTGAAGAGCTTTATGGTGGAGAGCAGCATCTAATCACTATC
AATATGTCTGAATACCAAGAGGCCCATACCGTATCTTCTCTTAAAGGTACGCCTCCTGGCTATGTTGGATATGGTCAGGG
CGGTGTTTTAACAGAAGCAGTAAGACGTCACCCGTACAGTGTGGTTTTACTTGATGAAATTGAAAAAGCACATAGCGATG
TTCAGGAACTTTTTTATCAGGTTTTTGATAAAGGTATGCTCGAAGATGGTGAAGGACGTTTAATCGATTTTAAAAATACG
ACGATTCTCCTCACTTCAAATGCGGGTTCAAGCGCGATCATGAAAGTCTGCCTGAGTCAGCCTGTAGAGGAATGGCCAGA
TGCCATTGAGTTAATTGAACATCTAAAACCAAGTCTCTACAAACAATTTAAACCCGCATTTTTGGGGCGCATGCGTATTG
TGCCTTACTTCCCACTACATGACGATTTACTGGTTAAAATTATTCACCATAAACTGGGTAAAGTAACTGCGCGTCTTGAA
AAACAATACGGCACACGAGTGCAATATTCAGAGCCACTGGTTGAGACAATTTTACAACGCTGCACCGAAGTAGATAGTGG
CGCACGCAATGTAGATCACATCTTAAACTCAACCATATTACCTGAACTGGCTACTCAGATTTTGGTGGCACTTGCAGAAC
AGAAGTTACCAAAGCACATCATGATTGATGTCAAAAATGATGACATCGTTTATCAACTTGATCCCGTTGAAAAAAAGATA
GCCAAGAAACGTAGTGCTAAAACCATCAAAGAAACCGAAGCTTAA

Upstream 100 bases:

>100_bases
GTTTATTTAACAATGATTTATGTTTAAAAAAGATGTTTTTTATTTTCTAAAATTATGGATTTTCTTATTCAACAATCCGA
ATTGATATTAATAAAATGAC

Downstream 100 bases:

>100_bases
GAATAGAGTCATACCATGAGTATAAACATTTCAGAGTTGTTACAGCCAATTACTGAACAATCTCCATGTGGAGAGGATTA
CTCATTTTCCAATGAATTTC

Product: ClpA/B-type chaperone

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 894; Mature: 894

Protein sequence:

>894_residues
MRFMMSNLKILITKLSGNSRTALEKSANSCILLQNFEIEIEHLFLELLNQNSSNDIQILLKKYKINTEELIEDLNRALSS
LPKGNNRTPIFSKSIVRLLEQAWLLASADQNPIIRSGHLLIALLTAPDLYQIAVRASDLFDVLPIDLMKHKFIEDCIKSV
ENAQLQQDENPVSQQASIETKNKTPALDQFTINLTEKAKSGSIDPVIGREYEIRLMLDILMRRRQNNPILTGEPGVGKTA
VVEGLALKIAQGLVPPALRNVQLHSLDIGLLQAGASVKGEFENRLKQVIQEVQSSTHPIILFIDEAHTLIGAGGQAGQND
AANLLKPALARGELRTIAATTWAEYKQYFEKDAALSRRFQVVKVEEPTETVAIDMLRAMIPVMQQHFKLQIDDEAIITAV
HASHRYISGRQLPDKAISVLDTAAARVALTQNAQPVKLDQLQAKLHNLKLEQNILDTEHRHSSMHEERLTKLAKEISQLE
ENIDEVYKRWQQERELVQKIQNIEINTDAPETADDQQINELRSELYQLQGHEPLVFERVNAQMINEIISDWTGIPIGNMV
NDEIQHILQLEQKLAQRVMGQDYALQQLVQGIKTSKAKLEDPNKPQGVFLLVGPSGVGKTETALALAEELYGGEQHLITI
NMSEYQEAHTVSSLKGTPPGYVGYGQGGVLTEAVRRHPYSVVLLDEIEKAHSDVQELFYQVFDKGMLEDGEGRLIDFKNT
TILLTSNAGSSAIMKVCLSQPVEEWPDAIELIEHLKPSLYKQFKPAFLGRMRIVPYFPLHDDLLVKIIHHKLGKVTARLE
KQYGTRVQYSEPLVETILQRCTEVDSGARNVDHILNSTILPELATQILVALAEQKLPKHIMIDVKNDDIVYQLDPVEKKI
AKKRSAKTIKETEA

Sequences:

>Translated_894_residues
MRFMMSNLKILITKLSGNSRTALEKSANSCILLQNFEIEIEHLFLELLNQNSSNDIQILLKKYKINTEELIEDLNRALSS
LPKGNNRTPIFSKSIVRLLEQAWLLASADQNPIIRSGHLLIALLTAPDLYQIAVRASDLFDVLPIDLMKHKFIEDCIKSV
ENAQLQQDENPVSQQASIETKNKTPALDQFTINLTEKAKSGSIDPVIGREYEIRLMLDILMRRRQNNPILTGEPGVGKTA
VVEGLALKIAQGLVPPALRNVQLHSLDIGLLQAGASVKGEFENRLKQVIQEVQSSTHPIILFIDEAHTLIGAGGQAGQND
AANLLKPALARGELRTIAATTWAEYKQYFEKDAALSRRFQVVKVEEPTETVAIDMLRAMIPVMQQHFKLQIDDEAIITAV
HASHRYISGRQLPDKAISVLDTAAARVALTQNAQPVKLDQLQAKLHNLKLEQNILDTEHRHSSMHEERLTKLAKEISQLE
ENIDEVYKRWQQERELVQKIQNIEINTDAPETADDQQINELRSELYQLQGHEPLVFERVNAQMINEIISDWTGIPIGNMV
NDEIQHILQLEQKLAQRVMGQDYALQQLVQGIKTSKAKLEDPNKPQGVFLLVGPSGVGKTETALALAEELYGGEQHLITI
NMSEYQEAHTVSSLKGTPPGYVGYGQGGVLTEAVRRHPYSVVLLDEIEKAHSDVQELFYQVFDKGMLEDGEGRLIDFKNT
TILLTSNAGSSAIMKVCLSQPVEEWPDAIELIEHLKPSLYKQFKPAFLGRMRIVPYFPLHDDLLVKIIHHKLGKVTARLE
KQYGTRVQYSEPLVETILQRCTEVDSGARNVDHILNSTILPELATQILVALAEQKLPKHIMIDVKNDDIVYQLDPVEKKI
AKKRSAKTIKETEA
>Mature_894_residues
MRFMMSNLKILITKLSGNSRTALEKSANSCILLQNFEIEIEHLFLELLNQNSSNDIQILLKKYKINTEELIEDLNRALSS
LPKGNNRTPIFSKSIVRLLEQAWLLASADQNPIIRSGHLLIALLTAPDLYQIAVRASDLFDVLPIDLMKHKFIEDCIKSV
ENAQLQQDENPVSQQASIETKNKTPALDQFTINLTEKAKSGSIDPVIGREYEIRLMLDILMRRRQNNPILTGEPGVGKTA
VVEGLALKIAQGLVPPALRNVQLHSLDIGLLQAGASVKGEFENRLKQVIQEVQSSTHPIILFIDEAHTLIGAGGQAGQND
AANLLKPALARGELRTIAATTWAEYKQYFEKDAALSRRFQVVKVEEPTETVAIDMLRAMIPVMQQHFKLQIDDEAIITAV
HASHRYISGRQLPDKAISVLDTAAARVALTQNAQPVKLDQLQAKLHNLKLEQNILDTEHRHSSMHEERLTKLAKEISQLE
ENIDEVYKRWQQERELVQKIQNIEINTDAPETADDQQINELRSELYQLQGHEPLVFERVNAQMINEIISDWTGIPIGNMV
NDEIQHILQLEQKLAQRVMGQDYALQQLVQGIKTSKAKLEDPNKPQGVFLLVGPSGVGKTETALALAEELYGGEQHLITI
NMSEYQEAHTVSSLKGTPPGYVGYGQGGVLTEAVRRHPYSVVLLDEIEKAHSDVQELFYQVFDKGMLEDGEGRLIDFKNT
TILLTSNAGSSAIMKVCLSQPVEEWPDAIELIEHLKPSLYKQFKPAFLGRMRIVPYFPLHDDLLVKIIHHKLGKVTARLE
KQYGTRVQYSEPLVETILQRCTEVDSGARNVDHILNSTILPELATQILVALAEQKLPKHIMIDVKNDDIVYQLDPVEKKI
AKKRSAKTIKETEA

Specific function: Required for secretion of hcp1 probably by providing the energy source for its translocation [H]

COG id: COG0542

COG function: function code O; ATPases with chaperone activity, ATP-binding subunit

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the clpA/clpB family [H]

Homologues:

Organism=Homo sapiens, GI13540606, Length=328, Percent_Identity=30.4878048780488, Blast_Score=146, Evalue=7e-35,
Organism=Escherichia coli, GI1788943, Length=885, Percent_Identity=38.3050847457627, Blast_Score=538, Evalue=1e-154,
Organism=Escherichia coli, GI1787109, Length=397, Percent_Identity=36.0201511335013, Blast_Score=239, Evalue=6e-64,
Organism=Saccharomyces cerevisiae, GI6320464, Length=689, Percent_Identity=37.0101596516691, Blast_Score=426, Evalue=1e-120,
Organism=Saccharomyces cerevisiae, GI6323002, Length=845, Percent_Identity=31.8343195266272, Blast_Score=412, Evalue=1e-115,

Paralogues:

None

Copy number: 560 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR013093
- InterPro:   IPR003959
- InterPro:   IPR017729
- InterPro:   IPR018368
- InterPro:   IPR001270
- InterPro:   IPR019489
- InterPro:   IPR023150 [H]

Pfam domain/function: PF00004 AAA; PF07724 AAA_2; PF10431 ClpB_D2-small [H]

EC number: NA

Molecular weight: Translated: 100436; Mature: 100436

Theoretical pI: Translated: 5.94; Mature: 5.94

Prosite motif: PS00870 CLPAB_1 ; PS00871 CLPAB_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRFMMSNLKILITKLSGNSRTALEKSANSCILLQNFEIEIEHLFLELLNQNSSNDIQILL
CCCHHCCCEEEEEEECCCCCHHHHHCCCCEEEEECCCHHHHHHHHHHHCCCCCCHHHHHH
KKYKINTEELIEDLNRALSSLPKGNNRTPIFSKSIVRLLEQAWLLASADQNPIIRSGHLL
HHHCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEECCCEE
IALLTAPDLYQIAVRASDLFDVLPIDLMKHKFIEDCIKSVENAQLQQDENPVSQQASIET
EEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCC
KNKTPALDQFTINLTEKAKSGSIDPVIGREYEIRLMLDILMRRRQNNPILTGEPGVGKTA
CCCCCCCCEEEEEEHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEECCCCCCHHH
VVEGLALKIAQGLVPPALRNVQLHSLDIGLLQAGASVKGEFENRLKQVIQEVQSSTHPII
HHHHHHHHHHHCCCCHHHCCCEEEEECHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCEE
LFIDEAHTLIGAGGQAGQNDAANLLKPALARGELRTIAATTWAEYKQYFEKDAALSRRFQ
EEEECCCHHEECCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCEE
VVKVEEPTETVAIDMLRAMIPVMQQHFKLQIDDEAIITAVHASHRYISGRQLPDKAISVL
EEEECCCHHHHHHHHHHHHHHHHHHHCEEEECCHHHHHHHHHHHHCCCCCCCCHHHHHHH
DTAAARVALTQNAQPVKLDQLQAKLHNLKLEQNILDTEHRHSSMHEERLTKLAKEISQLE
HHHHHHHEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ENIDEVYKRWQQERELVQKIQNIEINTDAPETADDQQINELRSELYQLQGHEPLVFERVN
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHH
AQMINEIISDWTGIPIGNMVNDEIQHILQLEQKLAQRVMGQDYALQQLVQGIKTSKAKLE
HHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCC
DPNKPQGVFLLVGPSGVGKTETALALAEELYGGEQHLITINMSEYQEAHTVSSLKGTPPG
CCCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCEEEEEEEHHHHHHHHHHHHCCCCCCC
YVGYGQGGVLTEAVRRHPYSVVLLDEIEKAHSDVQELFYQVFDKGMLEDGEGRLIDFKNT
EECCCCCCHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCC
TILLTSNAGSSAIMKVCLSQPVEEWPDAIELIEHLKPSLYKQFKPAFLGRMRIVPYFPLH
EEEEECCCCHHHHHHHHHHCCHHHHHHHHHHHHHHCHHHHHHHCHHHHCCEEEEECCCCC
DDLLVKIIHHKLGKVTARLEKQYGTRVQYSEPLVETILQRCTEVDSGARNVDHILNSTIL
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
PELATQILVALAEQKLPKHIMIDVKNDDIVYQLDPVEKKIAKKRSAKTIKETEA
HHHHHHHHHHHHHHCCCCEEEEEECCCCEEEEECHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MRFMMSNLKILITKLSGNSRTALEKSANSCILLQNFEIEIEHLFLELLNQNSSNDIQILL
CCCHHCCCEEEEEEECCCCCHHHHHCCCCEEEEECCCHHHHHHHHHHHCCCCCCHHHHHH
KKYKINTEELIEDLNRALSSLPKGNNRTPIFSKSIVRLLEQAWLLASADQNPIIRSGHLL
HHHCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEECCCEE
IALLTAPDLYQIAVRASDLFDVLPIDLMKHKFIEDCIKSVENAQLQQDENPVSQQASIET
EEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCC
KNKTPALDQFTINLTEKAKSGSIDPVIGREYEIRLMLDILMRRRQNNPILTGEPGVGKTA
CCCCCCCCEEEEEEHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEECCCCCCHHH
VVEGLALKIAQGLVPPALRNVQLHSLDIGLLQAGASVKGEFENRLKQVIQEVQSSTHPII
HHHHHHHHHHHCCCCHHHCCCEEEEECHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCEE
LFIDEAHTLIGAGGQAGQNDAANLLKPALARGELRTIAATTWAEYKQYFEKDAALSRRFQ
EEEECCCHHEECCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCEE
VVKVEEPTETVAIDMLRAMIPVMQQHFKLQIDDEAIITAVHASHRYISGRQLPDKAISVL
EEEECCCHHHHHHHHHHHHHHHHHHHCEEEECCHHHHHHHHHHHHCCCCCCCCHHHHHHH
DTAAARVALTQNAQPVKLDQLQAKLHNLKLEQNILDTEHRHSSMHEERLTKLAKEISQLE
HHHHHHHEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ENIDEVYKRWQQERELVQKIQNIEINTDAPETADDQQINELRSELYQLQGHEPLVFERVN
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHH
AQMINEIISDWTGIPIGNMVNDEIQHILQLEQKLAQRVMGQDYALQQLVQGIKTSKAKLE
HHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCC
DPNKPQGVFLLVGPSGVGKTETALALAEELYGGEQHLITINMSEYQEAHTVSSLKGTPPG
CCCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCEEEEEEEHHHHHHHHHHHHCCCCCCC
YVGYGQGGVLTEAVRRHPYSVVLLDEIEKAHSDVQELFYQVFDKGMLEDGEGRLIDFKNT
EECCCCCCHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCC
TILLTSNAGSSAIMKVCLSQPVEEWPDAIELIEHLKPSLYKQFKPAFLGRMRIVPYFPLH
EEEEECCCCHHHHHHHHHHCCHHHHHHHHHHHHHHCHHHHHHHCHHHHCCEEEEECCCCC
DDLLVKIIHHKLGKVTARLEKQYGTRVQYSEPLVETILQRCTEVDSGARNVDHILNSTIL
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
PELATQILVALAEQKLPKHIMIDVKNDDIVYQLDPVEKKIAKKRSAKTIKETEA
HHHHHHHHHHHHHHCCCCEEEEEECCCCEEEEECHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on peptide bonds (Peptidases); Serine endopeptidases [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]