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The map label for this gene is 50085757

Identifier: 50085757

GI number: 50085757

Start: 2648568

End: 2649077

Strand: Reverse

Name: 50085757

Synonym: ACIAD2691

Alternate gene names: NA

Gene position: 2649077-2648568 (Counterclockwise)

Preceding gene: 50085758

Following gene: 50085756

Centisome position: 73.61

GC content: 40.98

Gene sequence:

>510_bases
TTGACCATGGCGAAAAGAGAAAGCGTTCAAAAAAAGCTTCAGCGCATTCGACCACCACGTGTTCAGCTCACCTATGATGT
TGAAATTGGTGATGGTAAAGAGGCGAAGGAATTACCATTTGTCGTGGGTGTAATGGGGGATTTTTCGGCTGCATCCGAGC
TTGAAAAAACCAAACTTAAAGATAAAAAATTTATTAATGTTGATTTGGATAATATCGACGATGTTATGCAGTCTATGGCT
CCACGAGCCGCTTTTGATGTCGAAAATACACTGACAGAGGAAGGCGGACGCATGAACGTGGATTTAACCTTTAATTCAAT
GCAGGATTTTAGTCCTGAACAAATTACACAGCAGGTAGAGCCATTACGTAAATTGGTAGAAGCCCGTGAAAGACTGACAG
ACTTGCGCAATAAAATTTCTAATAACGAGCGTCTAGAAGACTTGCTGGATGAGGTTCTAAAAAATACGGATCAAGTACGT
AAACTCAGTGCGGAGGTTGATCATGAATAA

Upstream 100 bases:

>100_bases
CCTCGATCTACAACACCTGCTGCAACCCCAAAACCTGCTGCTGCAGCAAATAAATCGAGTACCAATCCATTTGAATCTTT
AAAGTAATTACACAGGAAAA

Downstream 100 bases:

>100_bases
TCCTCAACTCGCAAATAATACTGCACTTGAACCTGAAAATACGACGTTGCTTGATTCGATTGTTGAGCAGAGTCGAATTG
CCCGAAATGATGAAGAGCAT

Product: hypothetical protein

Products: NA

Alternate protein names: Type VI Secretion Protein Family; Cytoplasmic Protein; T6ss S; Conserved Protein; Cytoplasmic Protein SciH; Protein ImpB; Type VI Secretion System Core Protein; Type VI Secretion Protein VasQ; Type VI Secretion System Protein ImpB; Type VI Secretion System Protein; Intracellular Growth Locus Subunit A; Type VI Secretion

Number of amino acids: Translated: 169; Mature: 168

Protein sequence:

>169_residues
MTMAKRESVQKKLQRIRPPRVQLTYDVEIGDGKEAKELPFVVGVMGDFSAASELEKTKLKDKKFINVDLDNIDDVMQSMA
PRAAFDVENTLTEEGGRMNVDLTFNSMQDFSPEQITQQVEPLRKLVEARERLTDLRNKISNNERLEDLLDEVLKNTDQVR
KLSAEVDHE

Sequences:

>Translated_169_residues
MTMAKRESVQKKLQRIRPPRVQLTYDVEIGDGKEAKELPFVVGVMGDFSAASELEKTKLKDKKFINVDLDNIDDVMQSMA
PRAAFDVENTLTEEGGRMNVDLTFNSMQDFSPEQITQQVEPLRKLVEARERLTDLRNKISNNERLEDLLDEVLKNTDQVR
KLSAEVDHE
>Mature_168_residues
TMAKRESVQKKLQRIRPPRVQLTYDVEIGDGKEAKELPFVVGVMGDFSAASELEKTKLKDKKFINVDLDNIDDVMQSMAP
RAAFDVENTLTEEGGRMNVDLTFNSMQDFSPEQITQQVEPLRKLVEARERLTDLRNKISNNERLEDLLDEVLKNTDQVRK
LSAEVDHE

Specific function: Unknown

COG id: COG3516

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19395; Mature: 19264

Theoretical pI: Translated: 4.61; Mature: 4.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTMAKRESVQKKLQRIRPPRVQLTYDVEIGDGKEAKELPFVVGVMGDFSAASELEKTKLK
CCCHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCHHHCCEEEEECCCHHHHHHHHHHHHC
DKKFINVDLDNIDDVMQSMAPRAAFDVENTLTEEGGRMNVDLTFNSMQDFSPEQITQQVE
CCCEEECCHHHHHHHHHHHCCHHHHHHHHHHHCCCCEEEEEEEECCCCCCCHHHHHHHHH
PLRKLVEARERLTDLRNKISNNERLEDLLDEVLKNTDQVRKLSAEVDHE
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
TMAKRESVQKKLQRIRPPRVQLTYDVEIGDGKEAKELPFVVGVMGDFSAASELEKTKLK
CCHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCHHHCCEEEEECCCHHHHHHHHHHHHC
DKKFINVDLDNIDDVMQSMAPRAAFDVENTLTEEGGRMNVDLTFNSMQDFSPEQITQQVE
CCCEEECCHHHHHHHHHHHCCHHHHHHHHHHHCCCCEEEEEEEECCCCCCCHHHHHHHHH
PLRKLVEARERLTDLRNKISNNERLEDLLDEVLKNTDQVRKLSAEVDHE
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA