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The map label for this gene is yiaD [C]

Identifier: 50085748

GI number: 50085748

Start: 2636197

End: 2636961

Strand: Reverse

Name: yiaD [C]

Synonym: ACIAD2682

Alternate gene names: 50085748

Gene position: 2636961-2636197 (Counterclockwise)

Preceding gene: 50085749

Following gene: 50085747

Centisome position: 73.28

GC content: 41.05

Gene sequence:

>765_bases
ATGAAAACTAGACATGCGACACAATTAAAATTATGCATATTCGTAAGTGGTTGGTTATCACTGACATCTGTATTTGCTCA
GCCGATCATTGTTGAGGGGGTGGTTCCAAATGAAGCATCCAAACAAGCGATTCTACAAAAAATGCAGGCGGTATATGGTG
CAGACCAAGTCGTTGATAAAGTACAGGTGCGTCCTGTATCTGCACCTTATGGCTGGAGTGACTCTGTAACGCAAGTGATT
AGTCCTGATTTGAAAAAAGTCAAACAAGGCAAACTTACGGTACGTGGAACACAAGTTGAATTAACTGGAAAAATGAGTAA
TCCGAATGATATTCAACCGACTATCAGTCAATTTCAGTCACTGGTTCAGCCTCCTTATCGCTTTAATTCTCAGCTTACAA
TCAATCAGGCTGAACAAAAGATTGTTGATGATGCACTAAAAAATCGGATTATTGAGTTTGAATCTGGTAGCGCAATTCTC
ACTGCATCAGGCCAGCAGATCCTGGATGAAATGGCAGCCGCTTTGAAGAAAGTGGGGGGCAAGAAAGTTAAAATCATTGG
GCATACTGACAGTTCAGGAGATGCCTCGAAAAACTTGGTACTCAGCCAGGAACGTGCAGTGGCTGTAAAAAATTATCTGA
TCACTAAAAATATATCTTCAGATAATCTAAGCACGGAAGGTGTAGGTTCAAATAAGCCTGTTGCAGACAATACAACAGCA
GAAGGGCGCCGTAAAAATCGACGAATCGAATTTGAAGTCCTATAA

Upstream 100 bases:

>100_bases
ATGCAGGGTTGGCAACTCTGGAGCAATCTTTATGTCAAAGACAACTGAGTCTGTTACAGGGATTGAAACTTTTTCGGCAA
ACTTTTTTAGACGAATAATT

Downstream 100 bases:

>100_bases
AACGGTTTTAAATCAGATAAGGAAACCTTATGTCCCGTCCATATATTACCATTGGATCACCCACTACAGGCGGTGGTAAA
GTCATTACTGCCAATCGTCG

Product: outer membrane lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 254; Mature: 254

Protein sequence:

>254_residues
MKTRHATQLKLCIFVSGWLSLTSVFAQPIIVEGVVPNEASKQAILQKMQAVYGADQVVDKVQVRPVSAPYGWSDSVTQVI
SPDLKKVKQGKLTVRGTQVELTGKMSNPNDIQPTISQFQSLVQPPYRFNSQLTINQAEQKIVDDALKNRIIEFESGSAIL
TASGQQILDEMAAALKKVGGKKVKIIGHTDSSGDASKNLVLSQERAVAVKNYLITKNISSDNLSTEGVGSNKPVADNTTA
EGRRKNRRIEFEVL

Sequences:

>Translated_254_residues
MKTRHATQLKLCIFVSGWLSLTSVFAQPIIVEGVVPNEASKQAILQKMQAVYGADQVVDKVQVRPVSAPYGWSDSVTQVI
SPDLKKVKQGKLTVRGTQVELTGKMSNPNDIQPTISQFQSLVQPPYRFNSQLTINQAEQKIVDDALKNRIIEFESGSAIL
TASGQQILDEMAAALKKVGGKKVKIIGHTDSSGDASKNLVLSQERAVAVKNYLITKNISSDNLSTEGVGSNKPVADNTTA
EGRRKNRRIEFEVL
>Mature_254_residues
MKTRHATQLKLCIFVSGWLSLTSVFAQPIIVEGVVPNEASKQAILQKMQAVYGADQVVDKVQVRPVSAPYGWSDSVTQVI
SPDLKKVKQGKLTVRGTQVELTGKMSNPNDIQPTISQFQSLVQPPYRFNSQLTINQAEQKIVDDALKNRIIEFESGSAIL
TASGQQILDEMAAALKKVGGKKVKIIGHTDSSGDASKNLVLSQERAVAVKNYLITKNISSDNLSTEGVGSNKPVADNTTA
EGRRKNRRIEFEVL

Specific function: Unknown

COG id: COG2885

COG function: function code M; Outer membrane protein and related peptidoglycan-associated (lipo)proteins

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 OmpA-like domain [H]

Homologues:

Organism=Escherichia coli, GI48994946, Length=103, Percent_Identity=39.8058252427184, Blast_Score=81, Evalue=6e-17,
Organism=Escherichia coli, GI1788957, Length=100, Percent_Identity=38, Blast_Score=65, Evalue=6e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001035
- InterPro:   IPR006664
- InterPro:   IPR006690
- InterPro:   IPR006665
- InterPro:   IPR007055 [H]

Pfam domain/function: PF04972 BON; PF00691 OmpA [H]

EC number: NA

Molecular weight: Translated: 27705; Mature: 27705

Theoretical pI: Translated: 10.14; Mature: 10.14

Prosite motif: PS51123 OMPA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTRHATQLKLCIFVSGWLSLTSVFAQPIIVEGVVPNEASKQAILQKMQAVYGADQVVDK
CCCCCCHHEEEEEEHHHHHHHHHHHHCCEEEECCCCCCHHHHHHHHHHHHHHCHHHHHHH
VQVRPVSAPYGWSDSVTQVISPDLKKVKQGKLTVRGTQVELTGKMSNPNDIQPTISQFQS
HHEEECCCCCCCCCHHHHHHCHHHHHHHCCCEEEEEEEEEEEECCCCCCCCCHHHHHHHH
LVQPPYRFNSQLTINQAEQKIVDDALKNRIIEFESGSAILTASGQQILDEMAAALKKVGG
HHCCCCCCCCEEEECHHHHHHHHHHHHHCEEEECCCCEEEEECCHHHHHHHHHHHHHCCC
KKVKIIGHTDSSGDASKNLVLSQERAVAVKNYLITKNISSDNLSTEGVGSNKPVADNTTA
CEEEEEECCCCCCCCCCCEEECHHHHHHHHHEEEECCCCCCCCCCCCCCCCCCCCCCCCC
EGRRKNRRIEFEVL
CCHHCCCCEEEEEC
>Mature Secondary Structure
MKTRHATQLKLCIFVSGWLSLTSVFAQPIIVEGVVPNEASKQAILQKMQAVYGADQVVDK
CCCCCCHHEEEEEEHHHHHHHHHHHHCCEEEECCCCCCHHHHHHHHHHHHHHCHHHHHHH
VQVRPVSAPYGWSDSVTQVISPDLKKVKQGKLTVRGTQVELTGKMSNPNDIQPTISQFQS
HHEEECCCCCCCCCHHHHHHCHHHHHHHCCCEEEEEEEEEEEECCCCCCCCCHHHHHHHH
LVQPPYRFNSQLTINQAEQKIVDDALKNRIIEFESGSAILTASGQQILDEMAAALKKVGG
HHCCCCCCCCEEEECHHHHHHHHHHHHHCEEEECCCCEEEEECCHHHHHHHHHHHHHCCC
KKVKIIGHTDSSGDASKNLVLSQERAVAVKNYLITKNISSDNLSTEGVGSNKPVADNTTA
CEEEEEECCCCCCCCCCCEEECHHHHHHHHHEEEECCCCCCCCCCCCCCCCCCCCCCCCC
EGRRKNRRIEFEVL
CCHHCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]