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The map label for this gene is blc [H]

Identifier: 50085643

GI number: 50085643

Start: 2526581

End: 2527171

Strand: Reverse

Name: blc [H]

Synonym: ACIAD2568

Alternate gene names: 50085643

Gene position: 2527171-2526581 (Counterclockwise)

Preceding gene: 50085644

Following gene: 50085642

Centisome position: 70.23

GC content: 41.62

Gene sequence:

>591_bases
ATGCCATTATATAAAAATGTCCCGAAAGGGAGTTGGCGTTTAGCAAAAATTATATTGGGTGGAGCTGCCTTAACAGGTTT
GGCTGTTGCAACTGTTGCCTATGCACAAAATAAACCGCTTCCAACAGTTGAGCGTGTTGAACTGGATAAGTATCTGGGGG
TTTGGTACGAGATTGCGCGTAAACCACTTTACTTTGAAAATAAATGTGCAAAAAATATTACCGCCACATACACCTTGAAC
GAAAATGGCAATATTGTGGTAGATAACCAGTGTGTTGGGAAAGATGGTCAGCAGCATCAGTCACTGGGTGAAGCCTTTGT
TGTTAATCCGCCTTACAATTCAAAACTTAAAGTCAGCTTCTTACCTGAAGTGGTACGTTGGGTACCTGTTGCGCGCGGCG
ATTACTGGATTTTAAAGCTCGATGAGCACTATCAAACCGTGCTGGTTGGTGAGCCTTCTAGAAAATACTTGTGGATTTTA
TCCAGAACGCCTCAACCTTCTGAAGAGGTGATGAATGAATACCTGAGTTATGCCAAATCACTTGGATATGATCTTAAAGA
TTTAATCCGAGCAGAACATACTTCGGAATAA

Upstream 100 bases:

>100_bases
AGTGCTACATATTTCTACATTATCTGCATAAAAAACAAGCTAATGTAGCAACTAGATCTTTATAAGATATGGTCAGTATA
TAAATTCTGAGGAAATTATA

Downstream 100 bases:

>100_bases
CGAATTTTGGTAAACAAGAAAAACCATGCTTTGCATGGTTTTTCTTTAACTGAGGTCTTAAATTCAGTATGGTACAGGTT
GTTTTTTTATTATTTGGTCA

Product: outer membrane lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 196; Mature: 195

Protein sequence:

>196_residues
MPLYKNVPKGSWRLAKIILGGAALTGLAVATVAYAQNKPLPTVERVELDKYLGVWYEIARKPLYFENKCAKNITATYTLN
ENGNIVVDNQCVGKDGQQHQSLGEAFVVNPPYNSKLKVSFLPEVVRWVPVARGDYWILKLDEHYQTVLVGEPSRKYLWIL
SRTPQPSEEVMNEYLSYAKSLGYDLKDLIRAEHTSE

Sequences:

>Translated_196_residues
MPLYKNVPKGSWRLAKIILGGAALTGLAVATVAYAQNKPLPTVERVELDKYLGVWYEIARKPLYFENKCAKNITATYTLN
ENGNIVVDNQCVGKDGQQHQSLGEAFVVNPPYNSKLKVSFLPEVVRWVPVARGDYWILKLDEHYQTVLVGEPSRKYLWIL
SRTPQPSEEVMNEYLSYAKSLGYDLKDLIRAEHTSE
>Mature_195_residues
PLYKNVPKGSWRLAKIILGGAALTGLAVATVAYAQNKPLPTVERVELDKYLGVWYEIARKPLYFENKCAKNITATYTLNE
NGNIVVDNQCVGKDGQQHQSLGEAFVVNPPYNSKLKVSFLPEVVRWVPVARGDYWILKLDEHYQTVLVGEPSRKYLWILS
RTPQPSEEVMNEYLSYAKSLGYDLKDLIRAEHTSE

Specific function: Involved in the storage or transport of lipids necessary for membrane maintenance under stressful conditions. Displays a binding preference for lysophospholipids [H]

COG id: COG3040

COG function: function code M; Bacterial lipocalin

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the calycin superfamily. Lipocalin family [H]

Homologues:

Organism=Homo sapiens, GI4502163, Length=161, Percent_Identity=34.1614906832298, Blast_Score=75, Evalue=5e-14,
Organism=Escherichia coli, GI1790592, Length=172, Percent_Identity=38.953488372093, Blast_Score=103, Evalue=9e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012674
- InterPro:   IPR011038
- InterPro:   IPR013208
- InterPro:   IPR022271
- InterPro:   IPR002446
- InterPro:   IPR022272 [H]

Pfam domain/function: PF08212 Lipocalin_2 [H]

EC number: NA

Molecular weight: Translated: 22234; Mature: 22103

Theoretical pI: Translated: 8.57; Mature: 8.57

Prosite motif: PS00213 LIPOCALIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPLYKNVPKGSWRLAKIILGGAALTGLAVATVAYAQNKPLPTVERVELDKYLGVWYEIAR
CCCCCCCCCCCCEEEHHHHCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHC
KPLYFENKCAKNITATYTLNENGNIVVDNQCVGKDGQQHQSLGEAFVVNPPYNSKLKVSF
CCCCCCCHHCCCCEEEEEECCCCCEEECCCCCCCCCHHHHHCCCEEEECCCCCCEEEEEH
LPEVVRWVPVARGDYWILKLDEHYQTVLVGEPSRKYLWILSRTPQPSEEVMNEYLSYAKS
HHHHHHHHCCCCCCEEEEEECCCEEEEEEECCCCEEEEEEECCCCCHHHHHHHHHHHHHH
LGYDLKDLIRAEHTSE
CCCCHHHHHHHHCCCC
>Mature Secondary Structure 
PLYKNVPKGSWRLAKIILGGAALTGLAVATVAYAQNKPLPTVERVELDKYLGVWYEIAR
CCCCCCCCCCCEEEHHHHCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHC
KPLYFENKCAKNITATYTLNENGNIVVDNQCVGKDGQQHQSLGEAFVVNPPYNSKLKVSF
CCCCCCCHHCCCCEEEEEECCCCCEEECCCCCCCCCHHHHHCCCEEEECCCCCCEEEEEH
LPEVVRWVPVARGDYWILKLDEHYQTVLVGEPSRKYLWILSRTPQPSEEVMNEYLSYAKS
HHHHHHHHCCCCCCEEEEEECCCEEEEEEECCCCEEEEEEECCCCCHHHHHHHHHHHHHH
LGYDLKDLIRAEHTSE
CCCCHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]