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The map label for this gene is ynhG [C]

Identifier: 50085556

GI number: 50085556

Start: 2436822

End: 2438210

Strand: Direct

Name: ynhG [C]

Synonym: ACIAD2475

Alternate gene names: 50085556

Gene position: 2436822-2438210 (Clockwise)

Preceding gene: 50085553

Following gene: 50085557

Centisome position: 67.72

GC content: 42.91

Gene sequence:

>1389_bases
TTGAATTGCATGTTTGTTCGCTCTTTACTCGCATTGAGTCTAAGCTGCATCATTAGCGGTACAGTATTTGCGGCTTCAAC
GGTTGAACAACCGTTACATCCAAAAGTCGTTCGTAGCACAGATTTGATTGAAGATCCGATTGATCCTCTTGCAGTAGATT
CATCGGTAAAACAGAAACAAAACTCGACGACCAAATATAAACCAGCTGCGCCTGTACCTCGTAATAATGCTGCTGCATCC
AGCCCTGTTGCCTCTGCACCCGCATCAAGTCCAGTCGCTTCTCAGGCTCCAGCATCTAGCCCAACATCATCTTCAGGTGA
TGCTTCACTTTCTGCACAAGAACAGAAAGACCTGAATCAGGCGTCTGCGACTTTGCAAAATCTGGAAAACAGCGAAGATA
AACACGCAGATAGTGGGGCTGCCCCAGCCACACCTGCAACTAAAACCAGTGCGCCATCAACCACTTCTAGCCAATCACAG
GCCAAAGTATCATGGACACTGGACAGCTTAAACAATGCCGATTGGTATGAAAATATTGGTCGTGGTCAGTTCCCTGTTTA
TGCACGTGCTCAAGTGATGTTGAATAACACACATGCATCACCAGGTGCAATTGACGGTACGAGCGGAATGAATACGCTCA
AAGCCATTTCATCGTTTCAGCAAATCAATGGTTTAAAGCCAACAGGTGAATTGACTCAAGAGACATGGAGTGCATTGGTA
GCAAAGCAAAATAAACCTGCTTATGTAGAATACACACTCACAGAAGATGACTTGAAAGGTCCTTATGCACCTTCAATTCC
ACACGACTATGCACAACAAGCAAAAATGAAAGGTTTGTACTATGTGCGTGTCACTGAAATGTTGGGTGAAAAATTCCATA
TGGATGAAGACTTTTTGAAAAAGTTAAACCCAAAAGCAAGCTTTAAAAAAGCAGGTGAAAAAATCATTGTTGCCAATGTG
CGTAATGATCTGCCAGAAGATATTCATTTGATTATCGCGCATAAAGGTGCACGTCAGTTATACCTATTTAATAGCCGTAA
CCAAATGATTGCCTCGTTTCCTGCAACAATTGGCAGTAGTGATACGCCATCTCCAACAGGTACTTATAAGGTCGTTGGTG
TTGCACGCAACCCTTGGTATAGCTATTCTCCAAGTAACTTTGTACAAGGTAATAACTTAAAGCCACTGTCTTTGCCACCT
GGCCCAAATGCACCTGTCGGTAATATCTGGATTGGTTTAAGCAAAAAATCTTTTGGTATTCATGGTACGCCAAATCCATC
TGCGATTTCCAAAACAGCATCACATGGTTGTATTCGTTTAACCAACTGGGATGCTAACGATTTGGGAAATAAGGTACGCA
GTGGCGTGACGGTTAAATTCCTTGAATAA

Upstream 100 bases:

>100_bases
TACATCAAGACGGATTTACACAAAACAAATACTGCATCACAAATTATTTTCTGTAATACTTGCAAGGTTTTATACACTGA
TATATGAATAATTCTTAAGG

Downstream 100 bases:

>100_bases
TATCGATTAAGCTTTTCAAAGCCTGCAAATATGCAGGCTTTCTTATGCTTACCTCTTATATTTATCAGTTATTTTGATGT
ATTTTATTGTTTCATTATTT

Product: signal peptide

Products: NA

Alternate protein names: Spore protein YkuD homolog [H]

Number of amino acids: Translated: 462; Mature: 462

Protein sequence:

>462_residues
MNCMFVRSLLALSLSCIISGTVFAASTVEQPLHPKVVRSTDLIEDPIDPLAVDSSVKQKQNSTTKYKPAAPVPRNNAAAS
SPVASAPASSPVASQAPASSPTSSSGDASLSAQEQKDLNQASATLQNLENSEDKHADSGAAPATPATKTSAPSTTSSQSQ
AKVSWTLDSLNNADWYENIGRGQFPVYARAQVMLNNTHASPGAIDGTSGMNTLKAISSFQQINGLKPTGELTQETWSALV
AKQNKPAYVEYTLTEDDLKGPYAPSIPHDYAQQAKMKGLYYVRVTEMLGEKFHMDEDFLKKLNPKASFKKAGEKIIVANV
RNDLPEDIHLIIAHKGARQLYLFNSRNQMIASFPATIGSSDTPSPTGTYKVVGVARNPWYSYSPSNFVQGNNLKPLSLPP
GPNAPVGNIWIGLSKKSFGIHGTPNPSAISKTASHGCIRLTNWDANDLGNKVRSGVTVKFLE

Sequences:

>Translated_462_residues
MNCMFVRSLLALSLSCIISGTVFAASTVEQPLHPKVVRSTDLIEDPIDPLAVDSSVKQKQNSTTKYKPAAPVPRNNAAAS
SPVASAPASSPVASQAPASSPTSSSGDASLSAQEQKDLNQASATLQNLENSEDKHADSGAAPATPATKTSAPSTTSSQSQ
AKVSWTLDSLNNADWYENIGRGQFPVYARAQVMLNNTHASPGAIDGTSGMNTLKAISSFQQINGLKPTGELTQETWSALV
AKQNKPAYVEYTLTEDDLKGPYAPSIPHDYAQQAKMKGLYYVRVTEMLGEKFHMDEDFLKKLNPKASFKKAGEKIIVANV
RNDLPEDIHLIIAHKGARQLYLFNSRNQMIASFPATIGSSDTPSPTGTYKVVGVARNPWYSYSPSNFVQGNNLKPLSLPP
GPNAPVGNIWIGLSKKSFGIHGTPNPSAISKTASHGCIRLTNWDANDLGNKVRSGVTVKFLE
>Mature_462_residues
MNCMFVRSLLALSLSCIISGTVFAASTVEQPLHPKVVRSTDLIEDPIDPLAVDSSVKQKQNSTTKYKPAAPVPRNNAAAS
SPVASAPASSPVASQAPASSPTSSSGDASLSAQEQKDLNQASATLQNLENSEDKHADSGAAPATPATKTSAPSTTSSQSQ
AKVSWTLDSLNNADWYENIGRGQFPVYARAQVMLNNTHASPGAIDGTSGMNTLKAISSFQQINGLKPTGELTQETWSALV
AKQNKPAYVEYTLTEDDLKGPYAPSIPHDYAQQAKMKGLYYVRVTEMLGEKFHMDEDFLKKLNPKASFKKAGEKIIVANV
RNDLPEDIHLIIAHKGARQLYLFNSRNQMIASFPATIGSSDTPSPTGTYKVVGVARNPWYSYSPSNFVQGNNLKPLSLPP
GPNAPVGNIWIGLSKKSFGIHGTPNPSAISKTASHGCIRLTNWDANDLGNKVRSGVTVKFLE

Specific function: Probable enzyme that may play an important role in cell wall biology [H]

COG id: COG1376

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Spore wall. Note=Probably localized either on the surface of the outer spore membrane and/or in the inner spore coat (By similarity) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 LysM repeat [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018392
- InterPro:   IPR002482
- InterPro:   IPR005490 [H]

Pfam domain/function: PF01476 LysM; PF03734 YkuD [H]

EC number: NA

Molecular weight: Translated: 49400; Mature: 49400

Theoretical pI: Translated: 9.28; Mature: 9.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNCMFVRSLLALSLSCIISGTVFAASTVEQPLHPKVVRSTDLIEDPIDPLAVDSSVKQKQ
CCHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHCCHHHHHHH
NSTTKYKPAAPVPRNNAAASSPVASAPASSPVASQAPASSPTSSSGDASLSAQEQKDLNQ
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
ASATLQNLENSEDKHADSGAAPATPATKTSAPSTTSSQSQAKVSWTLDSLNNADWYENIG
HHHHHHHHCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCHHHHHCC
RGQFPVYARAQVMLNNTHASPGAIDGTSGMNTLKAISSFQQINGLKPTGELTQETWSALV
CCCCCCEEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
AKQNKPAYVEYTLTEDDLKGPYAPSIPHDYAQQAKMKGLYYVRVTEMLGEKFHMDEDFLK
HCCCCCCEEEEEECHHCCCCCCCCCCCHHHHHHHHHCCEEEEEEHHHHHHHHCCCHHHHH
KLNPKASFKKAGEKIIVANVRNDLPEDIHLIIAHKGARQLYLFNSRNQMIASFPATIGSS
HCCCCHHHHHCCCEEEEEECCCCCCCCEEEEEEECCCCEEEEECCCCCEEEECCCCCCCC
DTPSPTGTYKVVGVARNPWYSYSPSNFVQGNNLKPLSLPPGPNAPVGNIWIGLSKKSFGI
CCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCC
HGTPNPSAISKTASHGCIRLTNWDANDLGNKVRSGVTVKFLE
CCCCCHHHHHHHHCCCEEEEECCCHHHHHHHHHCCEEEEEEC
>Mature Secondary Structure
MNCMFVRSLLALSLSCIISGTVFAASTVEQPLHPKVVRSTDLIEDPIDPLAVDSSVKQKQ
CCHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHCCHHHHHHH
NSTTKYKPAAPVPRNNAAASSPVASAPASSPVASQAPASSPTSSSGDASLSAQEQKDLNQ
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
ASATLQNLENSEDKHADSGAAPATPATKTSAPSTTSSQSQAKVSWTLDSLNNADWYENIG
HHHHHHHHCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCHHHHHCC
RGQFPVYARAQVMLNNTHASPGAIDGTSGMNTLKAISSFQQINGLKPTGELTQETWSALV
CCCCCCEEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
AKQNKPAYVEYTLTEDDLKGPYAPSIPHDYAQQAKMKGLYYVRVTEMLGEKFHMDEDFLK
HCCCCCCEEEEEECHHCCCCCCCCCCCHHHHHHHHHCCEEEEEEHHHHHHHHCCCHHHHH
KLNPKASFKKAGEKIIVANVRNDLPEDIHLIIAHKGARQLYLFNSRNQMIASFPATIGSS
HCCCCHHHHHCCCEEEEEECCCCCCCCEEEEEEECCCCEEEEECCCCCEEEECCCCCCCC
DTPSPTGTYKVVGVARNPWYSYSPSNFVQGNNLKPLSLPPGPNAPVGNIWIGLSKKSFGI
CCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCC
HGTPNPSAISKTASHGCIRLTNWDANDLGNKVRSGVTVKFLE
CCCCCHHHHHHHHCCCEEEEECCCHHHHHHHHHCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA