Click here to switch to the map view.

The map label for this gene is dedA [H]

Identifier: 50085552

GI number: 50085552

Start: 2432766

End: 2433317

Strand: Direct

Name: dedA [H]

Synonym: ACIAD2471

Alternate gene names: 50085552

Gene position: 2432766-2433317 (Clockwise)

Preceding gene: 50085551

Following gene: 50085553

Centisome position: 67.6

GC content: 38.04

Gene sequence:

>552_bases
ATGGAATTTTTTAATTTTTTAGTGGGTTTTGAACATTACTTACCTATTTTGATCCAAGAATACGGACTTTGGATCTATGC
CATTTTATTTTTGATTATTTTTGCTGAAACTGCTTTTATATTTATGTTTTTTTTACCTGGTGATAGTCTCTTGCTTGCGG
TGGGAGCGCTGTGCTCGACTACTGCCATCATGAATCTGGGTTTTATCATTTTTTTGCTGTTTATTGCTGCAACACTAGGC
TATATCGTCAATTATCATATTGGGCGCCGCATGGGTGTTCGTATTTTTGAAGTAAAGTCCCGCTTTATCAAACATGAATA
TTTATTAAAAACCCATGATTATTTTCGTCGTCATGGTGCCATCACCATTCTGATTGCACGTTTTGTTCCCTTTGCACGAT
CTTTTGCTCCTTTTGCAGCAGGATCAAGCGGGATGAATTATACCGTTTTTTCGATTTATAACGTGATTGGGGCTTTTATC
TGGATTGCACTGCTGGTGACTGCGGGTTATTTACTCGGCCATACGGTGATGATGATTGGTGATATCCAGTAA

Upstream 100 bases:

>100_bases
CTTGACATCATTTTAGTTAAGATGTTGTCTATCTTGGTGAGTCATATCTTTAGTTTATGCATTAACGAAGAGGTAAAAAC
GAGATGAAGGTAGATCGTTA

Downstream 100 bases:

>100_bases
TTTTTGATCTTTAATTTTCAGCATGTGACGTGAATTTTTGACAATATAATTTGATCAACATATATTCTTGGCATAAAATC
GGATCATCGTAAGCGTTTAC

Product: DedA family protein

Products: NA

Alternate protein names: Protein DSG-1 [H]

Number of amino acids: Translated: 183; Mature: 183

Protein sequence:

>183_residues
MEFFNFLVGFEHYLPILIQEYGLWIYAILFLIIFAETAFIFMFFLPGDSLLLAVGALCSTTAIMNLGFIIFLLFIAATLG
YIVNYHIGRRMGVRIFEVKSRFIKHEYLLKTHDYFRRHGAITILIARFVPFARSFAPFAAGSSGMNYTVFSIYNVIGAFI
WIALLVTAGYLLGHTVMMIGDIQ

Sequences:

>Translated_183_residues
MEFFNFLVGFEHYLPILIQEYGLWIYAILFLIIFAETAFIFMFFLPGDSLLLAVGALCSTTAIMNLGFIIFLLFIAATLG
YIVNYHIGRRMGVRIFEVKSRFIKHEYLLKTHDYFRRHGAITILIARFVPFARSFAPFAAGSSGMNYTVFSIYNVIGAFI
WIALLVTAGYLLGHTVMMIGDIQ
>Mature_183_residues
MEFFNFLVGFEHYLPILIQEYGLWIYAILFLIIFAETAFIFMFFLPGDSLLLAVGALCSTTAIMNLGFIIFLLFIAATLG
YIVNYHIGRRMGVRIFEVKSRFIKHEYLLKTHDYFRRHGAITILIARFVPFARSFAPFAAGSSGMNYTVFSIYNVIGAFI
WIALLVTAGYLLGHTVMMIGDIQ

Specific function: Unknown

COG id: COG0586

COG function: function code S; Uncharacterized membrane-associated protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dedA family [H]

Homologues:

Organism=Escherichia coli, GI1788656, Length=179, Percent_Identity=46.927374301676, Blast_Score=159, Evalue=1e-40,
Organism=Escherichia coli, GI1789481, Length=152, Percent_Identity=38.8157894736842, Blast_Score=100, Evalue=9e-23,
Organism=Escherichia coli, GI1789384, Length=151, Percent_Identity=32.4503311258278, Blast_Score=75, Evalue=2e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015414 [H]

Pfam domain/function: PF09335 SNARE_assoc [H]

EC number: NA

Molecular weight: Translated: 20854; Mature: 20854

Theoretical pI: Translated: 8.91; Mature: 8.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEFFNFLVGFEHYLPILIQEYGLWIYAILFLIIFAETAFIFMFFLPGDSLLLAVGALCST
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
TAIMNLGFIIFLLFIAATLGYIVNYHIGRRMGVRIFEVKSRFIKHEYLLKTHDYFRRHGA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
ITILIARFVPFARSFAPFAAGSSGMNYTVFSIYNVIGAFIWIALLVTAGYLLGHTVMMIG
HHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
DIQ
CCC
>Mature Secondary Structure
MEFFNFLVGFEHYLPILIQEYGLWIYAILFLIIFAETAFIFMFFLPGDSLLLAVGALCST
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
TAIMNLGFIIFLLFIAATLGYIVNYHIGRRMGVRIFEVKSRFIKHEYLLKTHDYFRRHGA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
ITILIARFVPFARSFAPFAAGSSGMNYTVFSIYNVIGAFIWIALLVTAGYLLGHTVMMIG
HHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
DIQ
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]