Click here to switch to the map view.

The map label for this gene is ydiA [C]

Identifier: 50085507

GI number: 50085507

Start: 2386960

End: 2387796

Strand: Reverse

Name: ydiA [C]

Synonym: ACIAD2422

Alternate gene names: 50085507

Gene position: 2387796-2386960 (Counterclockwise)

Preceding gene: 50085520

Following gene: 50085506

Centisome position: 66.35

GC content: 39.19

Gene sequence:

>837_bases
ATGTCTGAAGGAAAACTCATTAAGCGTAGCGTGTTCTTTATTTCGGATGGAACAGCTATTACAGCAGAAACCCTCGGACA
TTCGTTACTGGCTCAATTTCCAAACGTTGATTTTGATATTCACATTATGCCGTATATCACGACTGAAGAAGCAGCAATGA
ATATTGTAGAAGAGATTAACCAGTGCCAGTCACGTGATGGAACTTTGCCTTTAGTGTTTGATACTTTGGTAGATCCGAAT
GTTCGGGAAATCATTAATACGTCTAAAGCAGTCAATCTGGATGTATTCGAAGGTCTGATCAGTAAACTAGAACAGGTACT
TGGAACACCGCCTACAACTTTAGTCGGACAAACTCATGCAGTGACCGACTCTGAATATTATAAGGCACGTATTGATGCGG
TTCATTTTGCATTAGACAATGACGATGGTGCTTTAACACGCCACTATGATAAAGCTGATATTATTTTAATTGGCGTCTCT
CGCTCTGGCAAAACACCTACGTCAATTTATCTCTCTTTGCAATTCGGGATTCGTGTAGCAAACTATCCTTTAACCGAAGA
AGATTTAGACGATAACCGTTTACCGAAAGTTCTTAAAGAACATAAAAACAAATTGTTTGGTTTAATGATTGATGCGGAGC
GTCTGGTTGCTATTCGAACTGAGCGTAAGGCCAACAGTCGTTATGCAAGCTATAGTCAGTGTCAGATGGAACTAAGGGCC
GTTGAAGGTATTTTTATTTCTGAAGGTATTCCTTATTTAAATGTATCAGAAATGTCAATTGAGGAAATTTCCACACGTAT
TCTACAAATGACTGGATTGAAACGTCGCATTGGCTAA

Upstream 100 bases:

>100_bases
ATTTGCTTAGATTTTTGATTTTTACTAAGCGACAGTCATGTAAGATCAGTTTACTATAAAGATTATATAGCACTTAGACA
AATATTTAAGGAGAATTTTC

Downstream 100 bases:

>100_bases
ATGATTCAATTTATGGAGAAATATATTGCATCAATATTTCTCCAATTTAAGCAAGATCAATCAGATTATCTCTAAATAAA
TATAGTACTTGAAATATTAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 278; Mature: 277

Protein sequence:

>278_residues
MSEGKLIKRSVFFISDGTAITAETLGHSLLAQFPNVDFDIHIMPYITTEEAAMNIVEEINQCQSRDGTLPLVFDTLVDPN
VREIINTSKAVNLDVFEGLISKLEQVLGTPPTTLVGQTHAVTDSEYYKARIDAVHFALDNDDGALTRHYDKADIILIGVS
RSGKTPTSIYLSLQFGIRVANYPLTEEDLDDNRLPKVLKEHKNKLFGLMIDAERLVAIRTERKANSRYASYSQCQMELRA
VEGIFISEGIPYLNVSEMSIEEISTRILQMTGLKRRIG

Sequences:

>Translated_278_residues
MSEGKLIKRSVFFISDGTAITAETLGHSLLAQFPNVDFDIHIMPYITTEEAAMNIVEEINQCQSRDGTLPLVFDTLVDPN
VREIINTSKAVNLDVFEGLISKLEQVLGTPPTTLVGQTHAVTDSEYYKARIDAVHFALDNDDGALTRHYDKADIILIGVS
RSGKTPTSIYLSLQFGIRVANYPLTEEDLDDNRLPKVLKEHKNKLFGLMIDAERLVAIRTERKANSRYASYSQCQMELRA
VEGIFISEGIPYLNVSEMSIEEISTRILQMTGLKRRIG
>Mature_277_residues
SEGKLIKRSVFFISDGTAITAETLGHSLLAQFPNVDFDIHIMPYITTEEAAMNIVEEINQCQSRDGTLPLVFDTLVDPNV
REIINTSKAVNLDVFEGLISKLEQVLGTPPTTLVGQTHAVTDSEYYKARIDAVHFALDNDDGALTRHYDKADIILIGVSR
SGKTPTSIYLSLQFGIRVANYPLTEEDLDDNRLPKVLKEHKNKLFGLMIDAERLVAIRTERKANSRYASYSQCQMELRAV
EGIFISEGIPYLNVSEMSIEEISTRILQMTGLKRRIG

Specific function: Unknown

COG id: COG1806

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the pyruvate, phosphate dikinase regulatory protein family [H]

Homologues:

Organism=Escherichia coli, GI1787995, Length=273, Percent_Identity=45.7875457875458, Blast_Score=252, Evalue=2e-68,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005177 [H]

Pfam domain/function: PF03618 DUF299 [H]

EC number: NA

Molecular weight: Translated: 31112; Mature: 30981

Theoretical pI: Translated: 4.94; Mature: 4.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEGKLIKRSVFFISDGTAITAETLGHSLLAQFPNVDFDIHIMPYITTEEAAMNIVEEIN
CCCCCEEEEEEEEEECCCEEEHHHHHHHHHHHCCCCCEEEEEEEEEECHHHHHHHHHHHH
QCQSRDGTLPLVFDTLVDPNVREIINTSKAVNLDVFEGLISKLEQVLGTPPTTLVGQTHA
HHHCCCCCEEEEEHHHCCCCHHHHHCCCCCEEHHHHHHHHHHHHHHHCCCCCCCCCCCEE
VTDSEYYKARIDAVHFALDNDDGALTRHYDKADIILIGVSRSGKTPTSIYLSLQFGIRVA
CCCCHHHHHEEEEEEEEEECCCCCEEEECCCCCEEEEEECCCCCCCEEEEEEEEECEEEE
NYPLTEEDLDDNRLPKVLKEHKNKLFGLMIDAERLVAIRTERKANSRYASYSQCQMELRA
CCCCCCCCCCCCHHHHHHHHHCCHHEEEEECCCCEEEEECCCCCCCCCCCHHHHHHHHHH
VEGIFISEGIPYLNVSEMSIEEISTRILQMTGLKRRIG
HCCEEEECCCCEEEECHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SEGKLIKRSVFFISDGTAITAETLGHSLLAQFPNVDFDIHIMPYITTEEAAMNIVEEIN
CCCCEEEEEEEEEECCCEEEHHHHHHHHHHHCCCCCEEEEEEEEEECHHHHHHHHHHHH
QCQSRDGTLPLVFDTLVDPNVREIINTSKAVNLDVFEGLISKLEQVLGTPPTTLVGQTHA
HHHCCCCCEEEEEHHHCCCCHHHHHCCCCCEEHHHHHHHHHHHHHHHCCCCCCCCCCCEE
VTDSEYYKARIDAVHFALDNDDGALTRHYDKADIILIGVSRSGKTPTSIYLSLQFGIRVA
CCCCHHHHHEEEEEEEEEECCCCCEEEECCCCCEEEEEECCCCCCCEEEEEEEEECEEEE
NYPLTEEDLDDNRLPKVLKEHKNKLFGLMIDAERLVAIRTERKANSRYASYSQCQMELRA
CCCCCCCCCCCCHHHHHHHHHCCHHEEEEECCCCEEEEECCCCCCCCCCCHHHHHHHHHH
VEGIFISEGIPYLNVSEMSIEEISTRILQMTGLKRRIG
HCCEEEECCCCEEEECHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA