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The map label for this gene is ybjE [H]

Identifier: 50085431

GI number: 50085431

Start: 2304884

End: 2305663

Strand: Direct

Name: ybjE [H]

Synonym: ACIAD2340

Alternate gene names: 50085431

Gene position: 2304884-2305663 (Clockwise)

Preceding gene: 50085430

Following gene: 50085434

Centisome position: 64.05

GC content: 38.46

Gene sequence:

>780_bases
TTGGCAGGGGTAGCTTATGAGTTTACACTTGCAATTCATCAAATTTCACAACCTGAACTGATCCTACCAACCGCACTGAT
TATCTCTTTAAGCACATCAATTGCATCTTTTATAACCTGCCTGATTACCTATCAAGTATTTGACAAAAATTCGATCCAAG
GCAAAGTATCTTTAAAGCTATTTTTAAATGCGATTAAAAATATTAGTCACGCCTTTTTTGCTTTAATGGTGGGTGCGACC
ATCGGAATTTTCAGTTTATGGCAAAATTTGGATTTTGTATTTAATAGCTGGTATCTGCTTTTAGTCTTTATTTTTCTGAT
TGGTATCGAGCTTGCATTTACTCGTTTTGATCGCTCATGGTTAAGCTGGAAAATTCTGATTGTTCCCTGTGCTGCAATCA
TTGGTTCAAGTTTGGCTGCAGTATTTTGTGCCTATCTTATACAAGGTTTATCGCTTCGCGAGATTGTGGCATTGTCACAA
GGCTACGGCTGGTATTCGATGTCAGGCATCTTATTTACCCAACTCCATTCGACAGAGTTAGGTGGGATTGCATTATTAAC
TGATCTATTTAGAGAAATTTTTGCCATTCTTTTAATGTATTGTTTTGGCTGGAGGTTTCCAAGATCTGCAATTTCGAGTG
CAGGTGCAACTTCAATGGACGCCACACTTGCAATGGTGAAACAATCATGTGGTACGCATTATGTACCACATGCTATGGTC
AGCGGCGTGATCTTAAGCTTACTGGCTCCAATCATGATCAGCCTAATTTTAATAGCTTAA

Upstream 100 bases:

>100_bases
AATTATGGCGATTTGCTTAGGCTATTTTATCGGCCCCAAATTAAATTCTTCACTCAAAAATCTAGCTTTTCGCATCCTAC
CCTACTTTTCATATCTTCTT

Downstream 100 bases:

>100_bases
GCCAGACTCGATAAAATCTGTTTCAACATTTCATTTGGTCGTTCGGATTTTGTAATTGGACGACCAATGACTAGATGAGT
CGAACCATCCAACATTGCCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 259; Mature: 258

Protein sequence:

>259_residues
MAGVAYEFTLAIHQISQPELILPTALIISLSTSIASFITCLITYQVFDKNSIQGKVSLKLFLNAIKNISHAFFALMVGAT
IGIFSLWQNLDFVFNSWYLLLVFIFLIGIELAFTRFDRSWLSWKILIVPCAAIIGSSLAAVFCAYLIQGLSLREIVALSQ
GYGWYSMSGILFTQLHSTELGGIALLTDLFREIFAILLMYCFGWRFPRSAISSAGATSMDATLAMVKQSCGTHYVPHAMV
SGVILSLLAPIMISLILIA

Sequences:

>Translated_259_residues
MAGVAYEFTLAIHQISQPELILPTALIISLSTSIASFITCLITYQVFDKNSIQGKVSLKLFLNAIKNISHAFFALMVGAT
IGIFSLWQNLDFVFNSWYLLLVFIFLIGIELAFTRFDRSWLSWKILIVPCAAIIGSSLAAVFCAYLIQGLSLREIVALSQ
GYGWYSMSGILFTQLHSTELGGIALLTDLFREIFAILLMYCFGWRFPRSAISSAGATSMDATLAMVKQSCGTHYVPHAMV
SGVILSLLAPIMISLILIA
>Mature_258_residues
AGVAYEFTLAIHQISQPELILPTALIISLSTSIASFITCLITYQVFDKNSIQGKVSLKLFLNAIKNISHAFFALMVGATI
GIFSLWQNLDFVFNSWYLLLVFIFLIGIELAFTRFDRSWLSWKILIVPCAAIIGSSLAAVFCAYLIQGLSLREIVALSQG
YGWYSMSGILFTQLHSTELGGIALLTDLFREIFAILLMYCFGWRFPRSAISSAGATSMDATLAMVKQSCGTHYVPHAMVS
GVILSLLAPIMISLILIA

Specific function: Unknown

COG id: COG2431

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_1452 [H]

Homologues:

Organism=Escherichia coli, GI87081795, Length=161, Percent_Identity=36.0248447204969, Blast_Score=90, Evalue=2e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005642
- ProDom:   PD022789 [H]

Pfam domain/function: PF03956 DUF340 [H]

EC number: NA

Molecular weight: Translated: 28487; Mature: 28356

Theoretical pI: Translated: 7.89; Mature: 7.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGVAYEFTLAIHQISQPELILPTALIISLSTSIASFITCLITYQVFDKNSIQGKVSLKL
CCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
FLNAIKNISHAFFALMVGATIGIFSLWQNLDFVFNSWYLLLVFIFLIGIELAFTRFDRSW
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LSWKILIVPCAAIIGSSLAAVFCAYLIQGLSLREIVALSQGYGWYSMSGILFTQLHSTEL
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCEEHHHHHHHHHHCCCC
GGIALLTDLFREIFAILLMYCFGWRFPRSAISSAGATSMDATLAMVKQSCGTHYVPHAMV
CHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCHHHHHHHHHHHHCCCCCCHHHHH
SGVILSLLAPIMISLILIA
HHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
AGVAYEFTLAIHQISQPELILPTALIISLSTSIASFITCLITYQVFDKNSIQGKVSLKL
CCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
FLNAIKNISHAFFALMVGATIGIFSLWQNLDFVFNSWYLLLVFIFLIGIELAFTRFDRSW
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LSWKILIVPCAAIIGSSLAAVFCAYLIQGLSLREIVALSQGYGWYSMSGILFTQLHSTEL
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCEEHHHHHHHHHHCCCC
GGIALLTDLFREIFAILLMYCFGWRFPRSAISSAGATSMDATLAMVKQSCGTHYVPHAMV
CHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCHHHHHHHHHHHHCCCCCCHHHHH
SGVILSLLAPIMISLILIA
HHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]