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The map label for this gene is ycbZ [H]

Identifier: 50085324

GI number: 50085324

Start: 2186165

End: 2188792

Strand: Direct

Name: ycbZ [H]

Synonym: ACIAD2216

Alternate gene names: 50085324

Gene position: 2186165-2188792 (Clockwise)

Preceding gene: 50085319

Following gene: 50085327

Centisome position: 60.75

GC content: 42.73

Gene sequence:

>2628_bases
ATGGCATCAACTTTATCTTCAACCACTACAACAGCAAATACCCTAAAAACCAATACCCTTCCATCCGCATTCGAGCAAAC
TGAGATTCAGAGTACTTTAGAGAAAACAGCACTTCAACCTGAAAAGCTGACACATATTCCACAACTTGAGGATATCCCAT
CTTCAACCAAACGCATTAAGCCACTGAATAACTTTTTAGGTCAGGATCGTGCGAAAGCCTCTGTTGAGGCAGGTATTTCC
CTGCCTTATTCGGGCTATAATATCTTTGCTGTAGGTACAGCAGGCCTAGGTAAGCGCACCATGATTAAGCGCTTACTCCA
ACAACATGCGAAAAGCATGCCTACCCCAGACGATTGGGTGTATGTCAATAATTTCAAAAATGCACGGCAGCCACTCGCGT
TAAGATTTCCTGCGGGTAGTGGACCAAAATTTCAAAATACGTTACATCAGGCGTGGCAAACGATTTTAAAGCAGCTTGAG
CGCCGTTTTACTGCAGAAACCTATCATAACCGTATTGAACAGATTCGTCAGGAAACTGGACAAGAGCAGCAAGAAGCGTT
AGTTGAACTCACCAAAGAAGGTGAAGAGCTTGATTTAAAACTCATTTCACGCAATGAAGAGCATTGTTTTGTTCCTGTTC
ATTTAAAAGATGATCAGGTTCATGAAATGACACAAAATGAAATTGAAGCACTAAGCAGCAAAGAGCGCGCTGAAATCGCA
GCCAACATGCGCTATATGGATAAAAAGCTTGAGCGTCTTGGATTACATCTAGGTTCACTTGAAGATGATGCTCGAGATCG
TGTATCAGTATTGAACCGTGATATTGCCAAACAAGTAGTCATTCCACGCATGGAACAGATTCTAAACAAGCACAAGACTG
TGCAGGGTTTGGATGAGTACCTGAAGCATTATGCAGATGACATTATTCAAAATGTAGAAATGATTCTGGAACAGGAAGAA
GATGACTTCTCACCTGCTTTATTCAATCGGGTGCCTTCGCGTTATCAAGCCAATACCATCGTGACCAATAAGCCAAATTC
TGGTGCACCTGTTATTTTTGAAGATTTTCCAACCCATTACAATTTGTTGGGGCATGTTGAACAACTTACCCAAAACGGCA
CGATTACCACTGATTTCACGTTGATCCGTCCAGGTTCTTTGCATCAGGCCAATGGTGGCTTTCTCATGCTTGAAGCAGAA
CAACTGCTAGAGCAACCTTATGCATGGCAGGGTTTGAAGCGTGCGCTTAAATCTGGACAGCTTAAACTCTCCTCTCTTGA
GCATATGCTAACGTTAACGGGTAGTATCTCGATTGAACCTGCGGCTGTACCGCTTGATCTTAAAGTGATTTTGATGGCAG
AACCAGAGATCTATTACGAGATACTGGAAGTAGAGCCTGAACTTGGCAGTGTATTTAAAATTCGCGCAGATTTTACAGAT
ACCCTACAACGTAATGAGACCAATGAACAAGCCTATATGCAGTTGATTGCTGATTATGTTCAGGCTGATAAGCTTCTGCC
GTTTGACCGTTCTGCACTTGCTGCGTTACTTACAGATTCAAGCCGTCAAGCTGAAGACCAAAGTTCACTTTCGTTACATG
CATCAACGTTAGGCGATTTAATTCGTGAAGCGCACCATCATGCATTTAAATCAGGCGATAAAATTGTTTCAGATCACCAT
ATCAATCTTGCCTTACAACATCGTCAATATCGCTTAGGCTATTTGAGAGAACTTTACTGGCAAGATCTATCACGAGGTAC
GCAACTCATTGAAACTCGCGGACATCGTCTTGGGCAGATCAATGCGCTCTCTGTAATTCATTACGCAGATGTGGAGTTTG
GTTTACCCTCTCGCTTAACTGCGTCTGTTTATCAGGGCGGTGGCGATATTCTAGACATCGAACGTAGTGTCGAACTGGGT
GGATCACTACATGCCAAAGGTGTACTTTTGATGTCGAGCTTCTTAAAAGCCCACTTTGGACGTTCACAAATCTTGCATTT
CTCGGCTGCATTGGCATTTGAACAAAGCTATGGTCAGGTCGATGGTGATAGTGCTACCGTTGCTGAATTATCTGCATTGA
TTTCGGCCATCAGCCAACTCCCAATTGATCAATCTTGGGCCATTACAGGTTCTATGAACCAATTGGGTCAGGTACAACCT
ATTGGCGGCGTTAACGCTAAAATCGAGGGTTTCTATGATGCATGTAAATTACAGGGTTTGACAGGCAAACAAGGCGTAAT
CATTCCGCGTCAAAATATGCAACATCTCATGCTACGCCAAGATGTCATGGAAGCCGTTAAAGCTGGTCAGTTCCATGTCC
ATGCCATTGAAACTATCGATCAGGCACTGGAAATTTTGATGGCTCGTCCTGTAGGAACCTTAGACAAAAAAGGTCGCTAT
AGTAAAGGATCAATTTATGCTGCGGTTATGGAACAACTCGAATATTGGCAAGCCATTGAAGATGGAGATGATGTAGAAGG
TGAGCCAAAAAAGAAGCGCAAAAAAAAGAAAAGAGAAAAATCGGATAGCAAAAAGTCAGTATGTGATGCTGAAGATGTAG
CACAACCTGAACTTAGCGTTTCGGTTTATCCAAAACTTAAGCGACGTGCAAAACGATATCATCAATAA

Upstream 100 bases:

>100_bases
ACAGCATCAAAGCTTGATCTTTTAGGTCAAACCTGTATACCTTTAAAACTCAACTCTGTTTATTTTTTGGATTTCACCTG
TGACCCAAAGACTCGATCAA

Downstream 100 bases:

>100_bases
GTATCTTGTATTACAGACAGGTCAGCCATTTGACTGACCTGTCTGCTTAAATAAGGACTCTACTTTAAGCCCTTAATATT
TTAAGATAATTCTCCAAATT

Product: ATP-dependent protease

Products: NA

Alternate protein names: ATP-dependent protease La homolog [H]

Number of amino acids: Translated: 875; Mature: 874

Protein sequence:

>875_residues
MASTLSSTTTTANTLKTNTLPSAFEQTEIQSTLEKTALQPEKLTHIPQLEDIPSSTKRIKPLNNFLGQDRAKASVEAGIS
LPYSGYNIFAVGTAGLGKRTMIKRLLQQHAKSMPTPDDWVYVNNFKNARQPLALRFPAGSGPKFQNTLHQAWQTILKQLE
RRFTAETYHNRIEQIRQETGQEQQEALVELTKEGEELDLKLISRNEEHCFVPVHLKDDQVHEMTQNEIEALSSKERAEIA
ANMRYMDKKLERLGLHLGSLEDDARDRVSVLNRDIAKQVVIPRMEQILNKHKTVQGLDEYLKHYADDIIQNVEMILEQEE
DDFSPALFNRVPSRYQANTIVTNKPNSGAPVIFEDFPTHYNLLGHVEQLTQNGTITTDFTLIRPGSLHQANGGFLMLEAE
QLLEQPYAWQGLKRALKSGQLKLSSLEHMLTLTGSISIEPAAVPLDLKVILMAEPEIYYEILEVEPELGSVFKIRADFTD
TLQRNETNEQAYMQLIADYVQADKLLPFDRSALAALLTDSSRQAEDQSSLSLHASTLGDLIREAHHHAFKSGDKIVSDHH
INLALQHRQYRLGYLRELYWQDLSRGTQLIETRGHRLGQINALSVIHYADVEFGLPSRLTASVYQGGGDILDIERSVELG
GSLHAKGVLLMSSFLKAHFGRSQILHFSAALAFEQSYGQVDGDSATVAELSALISAISQLPIDQSWAITGSMNQLGQVQP
IGGVNAKIEGFYDACKLQGLTGKQGVIIPRQNMQHLMLRQDVMEAVKAGQFHVHAIETIDQALEILMARPVGTLDKKGRY
SKGSIYAAVMEQLEYWQAIEDGDDVEGEPKKKRKKKKREKSDSKKSVCDAEDVAQPELSVSVYPKLKRRAKRYHQ

Sequences:

>Translated_875_residues
MASTLSSTTTTANTLKTNTLPSAFEQTEIQSTLEKTALQPEKLTHIPQLEDIPSSTKRIKPLNNFLGQDRAKASVEAGIS
LPYSGYNIFAVGTAGLGKRTMIKRLLQQHAKSMPTPDDWVYVNNFKNARQPLALRFPAGSGPKFQNTLHQAWQTILKQLE
RRFTAETYHNRIEQIRQETGQEQQEALVELTKEGEELDLKLISRNEEHCFVPVHLKDDQVHEMTQNEIEALSSKERAEIA
ANMRYMDKKLERLGLHLGSLEDDARDRVSVLNRDIAKQVVIPRMEQILNKHKTVQGLDEYLKHYADDIIQNVEMILEQEE
DDFSPALFNRVPSRYQANTIVTNKPNSGAPVIFEDFPTHYNLLGHVEQLTQNGTITTDFTLIRPGSLHQANGGFLMLEAE
QLLEQPYAWQGLKRALKSGQLKLSSLEHMLTLTGSISIEPAAVPLDLKVILMAEPEIYYEILEVEPELGSVFKIRADFTD
TLQRNETNEQAYMQLIADYVQADKLLPFDRSALAALLTDSSRQAEDQSSLSLHASTLGDLIREAHHHAFKSGDKIVSDHH
INLALQHRQYRLGYLRELYWQDLSRGTQLIETRGHRLGQINALSVIHYADVEFGLPSRLTASVYQGGGDILDIERSVELG
GSLHAKGVLLMSSFLKAHFGRSQILHFSAALAFEQSYGQVDGDSATVAELSALISAISQLPIDQSWAITGSMNQLGQVQP
IGGVNAKIEGFYDACKLQGLTGKQGVIIPRQNMQHLMLRQDVMEAVKAGQFHVHAIETIDQALEILMARPVGTLDKKGRY
SKGSIYAAVMEQLEYWQAIEDGDDVEGEPKKKRKKKKREKSDSKKSVCDAEDVAQPELSVSVYPKLKRRAKRYHQ
>Mature_874_residues
ASTLSSTTTTANTLKTNTLPSAFEQTEIQSTLEKTALQPEKLTHIPQLEDIPSSTKRIKPLNNFLGQDRAKASVEAGISL
PYSGYNIFAVGTAGLGKRTMIKRLLQQHAKSMPTPDDWVYVNNFKNARQPLALRFPAGSGPKFQNTLHQAWQTILKQLER
RFTAETYHNRIEQIRQETGQEQQEALVELTKEGEELDLKLISRNEEHCFVPVHLKDDQVHEMTQNEIEALSSKERAEIAA
NMRYMDKKLERLGLHLGSLEDDARDRVSVLNRDIAKQVVIPRMEQILNKHKTVQGLDEYLKHYADDIIQNVEMILEQEED
DFSPALFNRVPSRYQANTIVTNKPNSGAPVIFEDFPTHYNLLGHVEQLTQNGTITTDFTLIRPGSLHQANGGFLMLEAEQ
LLEQPYAWQGLKRALKSGQLKLSSLEHMLTLTGSISIEPAAVPLDLKVILMAEPEIYYEILEVEPELGSVFKIRADFTDT
LQRNETNEQAYMQLIADYVQADKLLPFDRSALAALLTDSSRQAEDQSSLSLHASTLGDLIREAHHHAFKSGDKIVSDHHI
NLALQHRQYRLGYLRELYWQDLSRGTQLIETRGHRLGQINALSVIHYADVEFGLPSRLTASVYQGGGDILDIERSVELGG
SLHAKGVLLMSSFLKAHFGRSQILHFSAALAFEQSYGQVDGDSATVAELSALISAISQLPIDQSWAITGSMNQLGQVQPI
GGVNAKIEGFYDACKLQGLTGKQGVIIPRQNMQHLMLRQDVMEAVKAGQFHVHAIETIDQALEILMARPVGTLDKKGRYS
KGSIYAAVMEQLEYWQAIEDGDDVEGEPKKKRKKKKREKSDSKKSVCDAEDVAQPELSVSVYPKLKRRAKRYHQ

Specific function: Unknown

COG id: COG1067

COG function: function code O; Predicted ATP-dependent protease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase S16 family [H]

Homologues:

Organism=Escherichia coli, GI1787188, Length=440, Percent_Identity=39.3181818181818, Blast_Score=290, Evalue=2e-79,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008269
- InterPro:   IPR001984
- InterPro:   IPR020568 [H]

Pfam domain/function: PF05362 Lon_C [H]

EC number: 3.4.21.- [C]

Molecular weight: Translated: 98279; Mature: 98148

Theoretical pI: Translated: 6.46; Mature: 6.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASTLSSTTTTANTLKTNTLPSAFEQTEIQSTLEKTALQPEKLTHIPQLEDIPSSTKRIK
CCCCCCCCCCCCHHEECCCCCHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCHHHHHC
PLNNFLGQDRAKASVEAGISLPYSGYNIFAVGTAGLGKRTMIKRLLQQHAKSMPTPDDWV
HHHHHHCCCHHHHHHHCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCEE
YVNNFKNARQPLALRFPAGSGPKFQNTLHQAWQTILKQLERRFTAETYHNRIEQIRQETG
EECCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
QEQQEALVELTKEGEELDLKLISRNEEHCFVPVHLKDDQVHEMTQNEIEALSSKERAEIA
CHHHHHHHHHHHCCCCEEEEEECCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHH
ANMRYMDKKLERLGLHLGSLEDDARDRVSVLNRDIAKQVVIPRMEQILNKHKTVQGLDEY
HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LKHYADDIIQNVEMILEQEEDDFSPALFNRVPSRYQANTIVTNKPNSGAPVIFEDFPTHY
HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCEEEECCCCCCCCEEECCCCCHH
NLLGHVEQLTQNGTITTDFTLIRPGSLHQANGGFLMLEAEQLLEQPYAWQGLKRALKSGQ
HHHHHHHHHHCCCCEEEEEEEECCCCCEECCCCEEEEEHHHHHCCCHHHHHHHHHHHCCC
LKLSSLEHMLTLTGSISIEPAAVPLDLKVILMAEPEIYYEILEVEPELGSVFKIRADFTD
EEHHHHHHHHHHCCCCEECCCCCCCCEEEEEEECCHHHHHHHHCCCCCCCEEEEECCHHH
TLQRNETNEQAYMQLIADYVQADKLLPFDRSALAALLTDSSRQAEDQSSLSLHASTLGDL
HHHCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHH
IREAHHHAFKSGDKIVSDHHINLALQHRQYRLGYLRELYWQDLSRGTQLIETRGHRLGQI
HHHHHHHHHHCCCCEECCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCE
NALSVIHYADVEFGLPSRLTASVYQGGGDILDIERSVELGGSLHAKGVLLMSSFLKAHFG
EHEEEEEEECCCCCCCCHHHHHHHCCCCCEEEEHHHHHCCCCCCHHHHHHHHHHHHHHCC
RSQILHFSAALAFEQSYGQVDGDSATVAELSALISAISQLPIDQSWAITGSMNQLGQVQP
HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEECCHHHCCCCCC
IGGVNAKIEGFYDACKLQGLTGKQGVIIPRQNMQHLMLRQDVMEAVKAGQFHVHAIETID
CCCCCCCHHHHHHHHHCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHCCCEEEHHHHHHH
QALEILMARPVGTLDKKGRYSKGSIYAAVMEQLEYWQAIEDGDDVEGEPKKKRKKKKREK
HHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHH
SDSKKSVCDAEDVAQPELSVSVYPKLKRRAKRYHQ
CCHHHHCCCHHHHCCCCCEEEECHHHHHHHHHCCC
>Mature Secondary Structure 
ASTLSSTTTTANTLKTNTLPSAFEQTEIQSTLEKTALQPEKLTHIPQLEDIPSSTKRIK
CCCCCCCCCCCHHEECCCCCHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCHHHHHC
PLNNFLGQDRAKASVEAGISLPYSGYNIFAVGTAGLGKRTMIKRLLQQHAKSMPTPDDWV
HHHHHHCCCHHHHHHHCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCEE
YVNNFKNARQPLALRFPAGSGPKFQNTLHQAWQTILKQLERRFTAETYHNRIEQIRQETG
EECCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
QEQQEALVELTKEGEELDLKLISRNEEHCFVPVHLKDDQVHEMTQNEIEALSSKERAEIA
CHHHHHHHHHHHCCCCEEEEEECCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHH
ANMRYMDKKLERLGLHLGSLEDDARDRVSVLNRDIAKQVVIPRMEQILNKHKTVQGLDEY
HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LKHYADDIIQNVEMILEQEEDDFSPALFNRVPSRYQANTIVTNKPNSGAPVIFEDFPTHY
HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCEEEECCCCCCCCEEECCCCCHH
NLLGHVEQLTQNGTITTDFTLIRPGSLHQANGGFLMLEAEQLLEQPYAWQGLKRALKSGQ
HHHHHHHHHHCCCCEEEEEEEECCCCCEECCCCEEEEEHHHHHCCCHHHHHHHHHHHCCC
LKLSSLEHMLTLTGSISIEPAAVPLDLKVILMAEPEIYYEILEVEPELGSVFKIRADFTD
EEHHHHHHHHHHCCCCEECCCCCCCCEEEEEEECCHHHHHHHHCCCCCCCEEEEECCHHH
TLQRNETNEQAYMQLIADYVQADKLLPFDRSALAALLTDSSRQAEDQSSLSLHASTLGDL
HHHCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHH
IREAHHHAFKSGDKIVSDHHINLALQHRQYRLGYLRELYWQDLSRGTQLIETRGHRLGQI
HHHHHHHHHHCCCCEECCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCE
NALSVIHYADVEFGLPSRLTASVYQGGGDILDIERSVELGGSLHAKGVLLMSSFLKAHFG
EHEEEEEEECCCCCCCCHHHHHHHCCCCCEEEEHHHHHCCCCCCHHHHHHHHHHHHHHCC
RSQILHFSAALAFEQSYGQVDGDSATVAELSALISAISQLPIDQSWAITGSMNQLGQVQP
HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEECCHHHCCCCCC
IGGVNAKIEGFYDACKLQGLTGKQGVIIPRQNMQHLMLRQDVMEAVKAGQFHVHAIETID
CCCCCCCHHHHHHHHHCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHCCCEEEHHHHHHH
QALEILMARPVGTLDKKGRYSKGSIYAAVMEQLEYWQAIEDGDDVEGEPKKKRKKKKREK
HHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHH
SDSKKSVCDAEDVAQPELSVSVYPKLKRRAKRYHQ
CCHHHHCCCHHHHCCCCCEEEECHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]