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The map label for this gene is yebC [C]

Identifier: 50085180

GI number: 50085180

Start: 2039854

End: 2040603

Strand: Direct

Name: yebC [C]

Synonym: ACIAD2052

Alternate gene names: 50085180

Gene position: 2039854-2040603 (Clockwise)

Preceding gene: 50085179

Following gene: 50085182

Centisome position: 56.68

GC content: 41.73

Gene sequence:

>750_bases
ATGGCAGGTCACTCTAAGTGGGCAAACACAAAGCATCGTAAAGCAAAACAAGATGCTAGCCGTGCTAAAGTTTTCACCAA
ATATATTCGTGAAATTGTAACAGCTGCAAAATTAGGTGGTGCGGATGCAGCAAGCAATCCTCGTCTACGTGCAGTCGTTG
AAAAAGCCCTATCTGTCAATATGACCCGTGATGCAATTAACCGTGCAATCCAGCGTGGTGCTGGTGGTGAAGACAACGAC
GATTTAAACGAAGTCACTTATGAAGGTTATGGTGTTGGTGGTGTCGCTGTACTGGTCGAAACCATGACCGACAATCTCAA
CCGTACCGTACCGGATGTTCGTCATTGCTTTAGTAAAACAAACGGTAATTTGGGAACAAACGGTTCTGTGTCTTATCTAT
TTACCAAACGTGGTGAGATTTCTTTTGAGGATGTCTCTTTAGAAGATAAGATCATGGATGTTGCACTCGAGGCTGGTGCA
GATGATATTGAAATTGAAGAAGATGGTATTTTAGTAATTACCTCGCCTGAAAGCTTTGGTGATGTACAAGATGCACTTAC
TGCAGCAGGTTTGAAATCTGATAACGCAGAAGTCGTGATGAGTCCATCGACAAAAGCTGAAATTACCGATATCGAACAAG
CCAAACAAATCATGAAAATGATTGATATGCTTGAAGATCTTGATGATGTGCAAAACGTTTATACCAACGTCGAATTTTCA
GAAGAAGTATTGGCACAGCTTGATGCCTAA

Upstream 100 bases:

>100_bases
TTTCTTAACCACTTGCTACTTTCTACAAAAAAAGAGCTTGTGATAGAATTACATTATTTGATCTGGTAATGGTACCAATC
TGTAAGGAGCATATTTCAAC

Downstream 100 bases:

>100_bases
TATTTGCTAAAAGTTACATAAGAAACGCGCTTGATGCGCGTTTTTTATACTTTATTTAAAAGTTTATAGCAATTAAACAC
ATTATATTCTTTAATAACAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 249; Mature: 248

Protein sequence:

>249_residues
MAGHSKWANTKHRKAKQDASRAKVFTKYIREIVTAAKLGGADAASNPRLRAVVEKALSVNMTRDAINRAIQRGAGGEDND
DLNEVTYEGYGVGGVAVLVETMTDNLNRTVPDVRHCFSKTNGNLGTNGSVSYLFTKRGEISFEDVSLEDKIMDVALEAGA
DDIEIEEDGILVITSPESFGDVQDALTAAGLKSDNAEVVMSPSTKAEITDIEQAKQIMKMIDMLEDLDDVQNVYTNVEFS
EEVLAQLDA

Sequences:

>Translated_249_residues
MAGHSKWANTKHRKAKQDASRAKVFTKYIREIVTAAKLGGADAASNPRLRAVVEKALSVNMTRDAINRAIQRGAGGEDND
DLNEVTYEGYGVGGVAVLVETMTDNLNRTVPDVRHCFSKTNGNLGTNGSVSYLFTKRGEISFEDVSLEDKIMDVALEAGA
DDIEIEEDGILVITSPESFGDVQDALTAAGLKSDNAEVVMSPSTKAEITDIEQAKQIMKMIDMLEDLDDVQNVYTNVEFS
EEVLAQLDA
>Mature_248_residues
AGHSKWANTKHRKAKQDASRAKVFTKYIREIVTAAKLGGADAASNPRLRAVVEKALSVNMTRDAINRAIQRGAGGEDNDD
LNEVTYEGYGVGGVAVLVETMTDNLNRTVPDVRHCFSKTNGNLGTNGSVSYLFTKRGEISFEDVSLEDKIMDVALEAGAD
DIEIEEDGILVITSPESFGDVQDALTAAGLKSDNAEVVMSPSTKAEITDIEQAKQIMKMIDMLEDLDDVQNVYTNVEFSE
EVLAQLDA

Specific function: Unknown

COG id: COG0217

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TACO1 family [H]

Homologues:

Organism=Homo sapiens, GI27545315, Length=251, Percent_Identity=30.2788844621514, Blast_Score=107, Evalue=1e-23,
Organism=Escherichia coli, GI1788171, Length=248, Percent_Identity=62.9032258064516, Blast_Score=310, Evalue=4e-86,
Organism=Escherichia coli, GI1788294, Length=235, Percent_Identity=37.0212765957447, Blast_Score=140, Evalue=1e-34,
Organism=Caenorhabditis elegans, GI17556100, Length=246, Percent_Identity=24.7967479674797, Blast_Score=69, Evalue=3e-12,
Organism=Saccharomyces cerevisiae, GI6321458, Length=263, Percent_Identity=31.9391634980989, Blast_Score=117, Evalue=2e-27,
Organism=Drosophila melanogaster, GI24583305, Length=255, Percent_Identity=30.5882352941176, Blast_Score=92, Evalue=3e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002876
- InterPro:   IPR017856 [H]

Pfam domain/function: PF01709 DUF28 [H]

EC number: NA

Molecular weight: Translated: 27007; Mature: 26876

Theoretical pI: Translated: 4.29; Mature: 4.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGHSKWANTKHRKAKQDASRAKVFTKYIREIVTAAKLGGADAASNPRLRAVVEKALSVN
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCC
MTRDAINRAIQRGAGGEDNDDLNEVTYEGYGVGGVAVLVETMTDNLNRTVPDVRHCFSKT
CHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHC
NGNLGTNGSVSYLFTKRGEISFEDVSLEDKIMDVALEAGADDIEIEEDGILVITSPESFG
CCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCCEECCCCEEEEECCCHHH
DVQDALTAAGLKSDNAEVVMSPSTKAEITDIEQAKQIMKMIDMLEDLDDVQNVYTNVEFS
HHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
EEVLAQLDA
HHHHHHHCC
>Mature Secondary Structure 
AGHSKWANTKHRKAKQDASRAKVFTKYIREIVTAAKLGGADAASNPRLRAVVEKALSVN
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCC
MTRDAINRAIQRGAGGEDNDDLNEVTYEGYGVGGVAVLVETMTDNLNRTVPDVRHCFSKT
CHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHC
NGNLGTNGSVSYLFTKRGEISFEDVSLEDKIMDVALEAGADDIEIEEDGILVITSPESFG
CCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCCEECCCCEEEEECCCHHH
DVQDALTAAGLKSDNAEVVMSPSTKAEITDIEQAKQIMKMIDMLEDLDDVQNVYTNVEFS
HHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
EEVLAQLDA
HHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA