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The map label for this gene is bbsG [H]

Identifier: 50085027

GI number: 50085027

Start: 1878395

End: 1879636

Strand: Reverse

Name: bbsG [H]

Synonym: ACIAD1886

Alternate gene names: 50085027

Gene position: 1879636-1878395 (Counterclockwise)

Preceding gene: 50085029

Following gene: 50085026

Centisome position: 52.23

GC content: 41.71

Gene sequence:

>1242_bases
ATGTTTGAACTTTCTGAGCGCGCGCAAGGCTTTATTTCAAAAACAAAAGCATTTATAGAAAACGAAATTGAGCCAATTGA
AGCTGATTTTTGGCATGAGGTTCATACGCTCAACCCTGATAGTCATTGGAAGAGCTGGACTTGGCCATCACAACTTGAAA
TATTAAAAAATAAGGCAAAGCAAGCTGGTCTTTGGAATATGTTTTTGCCAGATCCCACATTGGGTGCGGGTTTATCTGTG
CAGGAATATGCGCATATTGCTGAACTTTCTGGAAAAAGTTTGATCGCACCAATGGTATTTAATTGTAACGCGCCAGACAG
TGGCAATATGGAAGTTCTCTGGCGTTATGGTTCTGAGCAACAAAAGCAGCAATGGCTAAAACCTTTATTAGATGGAAAAA
TCCGTTCAGTTTTCTGTATGACAGAACCTGATGTTGCATCCAGTGACGCAACCAATATGCAAGCAACAGCAATTATTGAA
AATGACCAAATTGTACTCAATGGACGTAAATGGTGGTCATCTGGGCTTGGAGATCCAAATGCCAAAATCATTATTTTTAT
GGCACACACTCCAGATGCAACTAAAGATCGCCATCATCAACATTCAATGGTACTCATTCCTATTGATACAAAAGGCGTAA
CGATTGAACGTATGTTACCCGTATTTGGGGATTACGATGCACCTCATGGTCACGGCGAAATTAGTTTTGATCATGTTCGT
GTTCCTGTCGAAAATTTCATTGGTGGGGCGGGACAAGGCTTTGAAATTGCACAAGGACGTTTAGGGCCTGGGCGTATTCA
TCATTGTATGCGTTGTATCGGTGCAGCCGAAAAAGCACTCGAATTAATGATTAATCGTGGCATGTCTCGTAAAGCTTTTG
GAAAGGAAATACTTCAACTGGGTGGAAATTTGGAACGTGTTGCGGAAGCTCGTGTCGCGATTGATCAGGCTAGACTCTTA
ACCTTATATGCAGCTTATAAAATGGATACGCTTGGCAATATGGCAGCATTAACTGAAATTTCTGCCATTAAAGTTGTAGC
ACCTCGTGTTTTGGAACAAGTGGTCGATATGGCGATACAAATACACGGCGGTGCTGGTGTATCGCAAGATACGCCATTGA
CCGCATTTTTTGCTCAAGCTCGTAGTTTACGTTTGGCAGATGGCCCAGATGAAGTACATAAAGGCATGATTGCAAAAATT
GAACTGGCCAAACATGGCTATAGTACAAGAAGACAAGCATAA

Upstream 100 bases:

>100_bases
ATTATTCATAGTGATGTATTGGATAAAATCATTTCATGCATAATAAATTTGAGCGTATGTTCAAGTAAAGCAAAATGATA
AACGAATTAAAGGAATCATC

Downstream 100 bases:

>100_bases
ACAATTCAATATATTATCAGGAAAACATATGTCGATGATTGATACAGGTGGCCAAGTTAGAAAAGGTGAGGAACTGAATG
TTTTAGCAGTAGAAAACTGG

Product: acyl-CoA dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 413; Mature: 413

Protein sequence:

>413_residues
MFELSERAQGFISKTKAFIENEIEPIEADFWHEVHTLNPDSHWKSWTWPSQLEILKNKAKQAGLWNMFLPDPTLGAGLSV
QEYAHIAELSGKSLIAPMVFNCNAPDSGNMEVLWRYGSEQQKQQWLKPLLDGKIRSVFCMTEPDVASSDATNMQATAIIE
NDQIVLNGRKWWSSGLGDPNAKIIIFMAHTPDATKDRHHQHSMVLIPIDTKGVTIERMLPVFGDYDAPHGHGEISFDHVR
VPVENFIGGAGQGFEIAQGRLGPGRIHHCMRCIGAAEKALELMINRGMSRKAFGKEILQLGGNLERVAEARVAIDQARLL
TLYAAYKMDTLGNMAALTEISAIKVVAPRVLEQVVDMAIQIHGGAGVSQDTPLTAFFAQARSLRLADGPDEVHKGMIAKI
ELAKHGYSTRRQA

Sequences:

>Translated_413_residues
MFELSERAQGFISKTKAFIENEIEPIEADFWHEVHTLNPDSHWKSWTWPSQLEILKNKAKQAGLWNMFLPDPTLGAGLSV
QEYAHIAELSGKSLIAPMVFNCNAPDSGNMEVLWRYGSEQQKQQWLKPLLDGKIRSVFCMTEPDVASSDATNMQATAIIE
NDQIVLNGRKWWSSGLGDPNAKIIIFMAHTPDATKDRHHQHSMVLIPIDTKGVTIERMLPVFGDYDAPHGHGEISFDHVR
VPVENFIGGAGQGFEIAQGRLGPGRIHHCMRCIGAAEKALELMINRGMSRKAFGKEILQLGGNLERVAEARVAIDQARLL
TLYAAYKMDTLGNMAALTEISAIKVVAPRVLEQVVDMAIQIHGGAGVSQDTPLTAFFAQARSLRLADGPDEVHKGMIAKI
ELAKHGYSTRRQA
>Mature_413_residues
MFELSERAQGFISKTKAFIENEIEPIEADFWHEVHTLNPDSHWKSWTWPSQLEILKNKAKQAGLWNMFLPDPTLGAGLSV
QEYAHIAELSGKSLIAPMVFNCNAPDSGNMEVLWRYGSEQQKQQWLKPLLDGKIRSVFCMTEPDVASSDATNMQATAIIE
NDQIVLNGRKWWSSGLGDPNAKIIIFMAHTPDATKDRHHQHSMVLIPIDTKGVTIERMLPVFGDYDAPHGHGEISFDHVR
VPVENFIGGAGQGFEIAQGRLGPGRIHHCMRCIGAAEKALELMINRGMSRKAFGKEILQLGGNLERVAEARVAIDQARLL
TLYAAYKMDTLGNMAALTEISAIKVVAPRVLEQVVDMAIQIHGGAGVSQDTPLTAFFAQARSLRLADGPDEVHKGMIAKI
ELAKHGYSTRRQA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI211971008, Length=410, Percent_Identity=52.9268292682927, Blast_Score=411, Evalue=1e-115,
Organism=Homo sapiens, GI38505218, Length=403, Percent_Identity=53.3498759305211, Blast_Score=411, Evalue=1e-115,
Organism=Homo sapiens, GI48976061, Length=410, Percent_Identity=52.9268292682927, Blast_Score=410, Evalue=1e-115,
Organism=Homo sapiens, GI4557233, Length=403, Percent_Identity=29.2803970223325, Blast_Score=133, Evalue=3e-31,
Organism=Homo sapiens, GI187960098, Length=411, Percent_Identity=24.0875912408759, Blast_Score=118, Evalue=8e-27,
Organism=Homo sapiens, GI21361497, Length=388, Percent_Identity=26.5463917525773, Blast_Score=118, Evalue=9e-27,
Organism=Homo sapiens, GI4557231, Length=411, Percent_Identity=24.0875912408759, Blast_Score=118, Evalue=1e-26,
Organism=Homo sapiens, GI4501859, Length=342, Percent_Identity=28.3625730994152, Blast_Score=106, Evalue=5e-23,
Organism=Homo sapiens, GI4557235, Length=395, Percent_Identity=24.5569620253165, Blast_Score=97, Evalue=2e-20,
Organism=Homo sapiens, GI76496475, Length=395, Percent_Identity=24.5569620253165, Blast_Score=97, Evalue=2e-20,
Organism=Homo sapiens, GI7656849, Length=345, Percent_Identity=25.5072463768116, Blast_Score=93, Evalue=4e-19,
Organism=Homo sapiens, GI4501857, Length=338, Percent_Identity=26.0355029585799, Blast_Score=82, Evalue=8e-16,
Organism=Homo sapiens, GI226958412, Length=291, Percent_Identity=23.7113402061856, Blast_Score=77, Evalue=2e-14,
Organism=Homo sapiens, GI226958414, Length=291, Percent_Identity=23.7113402061856, Blast_Score=77, Evalue=3e-14,
Organism=Escherichia coli, GI87081958, Length=307, Percent_Identity=25.0814332247557, Blast_Score=76, Evalue=5e-15,
Organism=Caenorhabditis elegans, GI17562446, Length=405, Percent_Identity=48.3950617283951, Blast_Score=382, Evalue=1e-106,
Organism=Caenorhabditis elegans, GI17534899, Length=395, Percent_Identity=28.3544303797468, Blast_Score=120, Evalue=9e-28,
Organism=Caenorhabditis elegans, GI71985184, Length=343, Percent_Identity=27.6967930029155, Blast_Score=112, Evalue=5e-25,
Organism=Caenorhabditis elegans, GI17533517, Length=293, Percent_Identity=28.6689419795222, Blast_Score=106, Evalue=2e-23,
Organism=Caenorhabditis elegans, GI17569725, Length=422, Percent_Identity=25.5924170616114, Blast_Score=105, Evalue=3e-23,
Organism=Caenorhabditis elegans, GI17570075, Length=409, Percent_Identity=23.4718826405868, Blast_Score=103, Evalue=2e-22,
Organism=Caenorhabditis elegans, GI17506239, Length=285, Percent_Identity=25.9649122807018, Blast_Score=96, Evalue=4e-20,
Organism=Caenorhabditis elegans, GI17508101, Length=398, Percent_Identity=22.8643216080402, Blast_Score=92, Evalue=4e-19,
Organism=Caenorhabditis elegans, GI71985192, Length=256, Percent_Identity=27.734375, Blast_Score=92, Evalue=6e-19,
Organism=Caenorhabditis elegans, GI17538396, Length=402, Percent_Identity=24.1293532338308, Blast_Score=92, Evalue=7e-19,
Organism=Caenorhabditis elegans, GI17551932, Length=368, Percent_Identity=25.8152173913043, Blast_Score=87, Evalue=1e-17,
Organism=Caenorhabditis elegans, GI17505929, Length=351, Percent_Identity=22.7920227920228, Blast_Score=82, Evalue=4e-16,
Organism=Caenorhabditis elegans, GI71990804, Length=281, Percent_Identity=26.3345195729537, Blast_Score=77, Evalue=2e-14,
Organism=Drosophila melanogaster, GI21356377, Length=402, Percent_Identity=27.363184079602, Blast_Score=119, Evalue=3e-27,
Organism=Drosophila melanogaster, GI24646207, Length=348, Percent_Identity=28.1609195402299, Blast_Score=117, Evalue=1e-26,
Organism=Drosophila melanogaster, GI24660351, Length=398, Percent_Identity=25.1256281407035, Blast_Score=103, Evalue=2e-22,
Organism=Drosophila melanogaster, GI24666513, Length=288, Percent_Identity=26.7361111111111, Blast_Score=100, Evalue=4e-21,
Organism=Drosophila melanogaster, GI281363737, Length=344, Percent_Identity=25, Blast_Score=96, Evalue=4e-20,
Organism=Drosophila melanogaster, GI21355753, Length=287, Percent_Identity=23.3449477351916, Blast_Score=71, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006092
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: =1.3.99.21 [H]

Molecular weight: Translated: 45720; Mature: 45720

Theoretical pI: Translated: 6.72; Mature: 6.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFELSERAQGFISKTKAFIENEIEPIEADFWHEVHTLNPDSHWKSWTWPSQLEILKNKAK
CCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHH
QAGLWNMFLPDPTLGAGLSVQEYAHIAELSGKSLIAPMVFNCNAPDSGNMEVLWRYGSEQ
HCCCEEEECCCCCCCCCCCHHHHHHHHHHCCCCEECEEEEECCCCCCCCEEEEEECCCHH
QKQQWLKPLLDGKIRSVFCMTEPDVASSDATNMQATAIIENDQIVLNGRKWWSSGLGDPN
HHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCEEEEEEECCEEEEECCHHHCCCCCCCC
AKIIIFMAHTPDATKDRHHQHSMVLIPIDTKGVTIERMLPVFGDYDAPHGHGEISFDHVR
CEEEEEEECCCCCCCCCCCCCCEEEEEECCCCEEHHHHHHHHCCCCCCCCCCCEEEEEEE
VPVENFIGGAGQGFEIAQGRLGPGRIHHCMRCIGAAEKALELMINRGMSRKAFGKEILQL
CCHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
GGNLERVAEARVAIDQARLLTLYAAYKMDTLGNMAALTEISAIKVVAPRVLEQVVDMAIQ
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHEEE
IHGGAGVSQDTPLTAFFAQARSLRLADGPDEVHKGMIAKIELAKHGYSTRRQA
EECCCCCCCCCCHHHHHHHHHCEECCCCHHHHHCCCEEEEEEHHCCCCCCCCC
>Mature Secondary Structure
MFELSERAQGFISKTKAFIENEIEPIEADFWHEVHTLNPDSHWKSWTWPSQLEILKNKAK
CCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHH
QAGLWNMFLPDPTLGAGLSVQEYAHIAELSGKSLIAPMVFNCNAPDSGNMEVLWRYGSEQ
HCCCEEEECCCCCCCCCCCHHHHHHHHHHCCCCEECEEEEECCCCCCCCEEEEEECCCHH
QKQQWLKPLLDGKIRSVFCMTEPDVASSDATNMQATAIIENDQIVLNGRKWWSSGLGDPN
HHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCEEEEEEECCEEEEECCHHHCCCCCCCC
AKIIIFMAHTPDATKDRHHQHSMVLIPIDTKGVTIERMLPVFGDYDAPHGHGEISFDHVR
CEEEEEEECCCCCCCCCCCCCCEEEEEECCCCEEHHHHHHHHCCCCCCCCCCCEEEEEEE
VPVENFIGGAGQGFEIAQGRLGPGRIHHCMRCIGAAEKALELMINRGMSRKAFGKEILQL
CCHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
GGNLERVAEARVAIDQARLLTLYAAYKMDTLGNMAALTEISAIKVVAPRVLEQVVDMAIQ
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHEEE
IHGGAGVSQDTPLTAFFAQARSLRLADGPDEVHKGMIAKIELAKHGYSTRRQA
EECCCCCCCCCCHHHHHHHHHCEECCCCHHHHHCCCEEEEEEHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10629170; 12420174 [H]