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The map label for this gene is desC

Identifier: 50084785

GI number: 50084785

Start: 1623653

End: 1624624

Strand: Direct

Name: desC

Synonym: ACIAD1627

Alternate gene names: NA

Gene position: 1623653-1624624 (Clockwise)

Preceding gene: 50084784

Following gene: 50084786

Centisome position: 45.12

GC content: 38.17

Gene sequence:

>972_bases
ATGCCTAAATTTTTTCTACGATGGATCGATAGCTGGTCAAATTTAAACCATACGCAAGTATCGACGCAAGTGTATTCTTC
ACAACCTCAACGGATACAGTGGCTGCGTATTATCCCATTTATTGTGTTGCATATTGCCTGTCTAGCTGTGTTCTGGATCG
GATTTTCCTGGTTTGCGATCTTCTTCATGTTGGGTTTTTATGTCATTCGCATGTTTGCAATTACTGCTTTTTTTCATCGT
TATCTTTCCCACAAAACTTTTCAAACTTCGCGTCCAGTTCAGTTCTTATTTATTCTGATTGGTACAATGAGTGCTCAAAG
AGGACCATTATGGTGGGCTGCGCATCATCGTTATCATCATCGATTTACTGATACAGATCAGGATCCGCATTCATCTACCA
AAGGGTTTTGGTATAGTCACGTCGGATGGTTTTTGAATGAAGAAAATTTTGCGATTCGAAAGTCAATTATTAAAGACTGG
CTCAAATACCCAGAACTGATATGGTTAGACCGTTTTAGCTTGCCTGTGGTTTTAGCAACGGCTTTTGCTATCTATGCTTT
GGGCGAGGTTTTAGCGATTTATGCACCACAACTTAAAACCAATGGATTGCAACTTCTGGTGTGGGGTTTTGTAGTGTCAA
CCGTTTTATTAACTCACGCTACATTGTGTATAAATTCACTGGCGCATCGTTATGGTTCAAAAGATTTTGAAACAGATGAT
CAAAGTCGCAATAACTTTTTCTTATCGATTATTACCTTAGGTGAGGGCTGGCATAATAATCATCATTTCTACGCAGGCAG
TACCCGACAAGGATTTTTCTGGTGGCAGATTGATGTGACTTATTATTTGCTCAAAATTATGTCGTGGTGTGGGTTGGTGT
GGGCAATCAAACCAGTTCCAGAGCGAATTTATACCAGTTCAAAAAAATCAAATTCATTAAAAGATAAAAAAATTAATATT
ACCAATATTTAA

Upstream 100 bases:

>100_bases
ATTTTTCGGTTCAACTGGGGCATATGTTATGCTTCACATAAAATTCATATCGCATATCTTAAAATCATAATAAAAGAAAT
GCAGCAGACCGAGAAAATCA

Downstream 100 bases:

>100_bases
GGCGAGGAAACTTAATGAAGATTGCCATTGTGGGCTCTGGTATTTCTGGTATGTACGCTGCGTGGAAGCTCTCGAAACAT
CATCAGGTGACGATTTTCGA

Product: delta 9 acyl-lipid fatty acid desaturase

Products: NA

Alternate protein names: Fatty Acid Desaturase; Delta-9 Acyl-Phospholipid Desaturase; Fatty-Acid Desaturase; Acyl-CoA Desaturase; Delta-9 Desaturase; Fatty Acid Desaturase Subfamily; Delta 9 Acyl-Lipid Fatty Acid Desaturase; Fatty Acid Desaturase Family Proteiin; Fatty Acid Desaturase Domain Protein; Stearoyl-CoA Desaturase; Fatty Acid Desaturase Family Protein; Palmitoyl-Monogalactosyldiacylglycerol Delta-7 Desaturase; Delta-9 Acyl-Lipid Desaturase; Delta 9 Acyl-Lipid Desaturase; Membrane-Bound Fatty Acid Desaturase; Long Chain Acyl-CoA Desaturase; Delta-9 Fatty Acid Desaturase; Fatty-Acid Desaturase Transmenbrane Protein; Delta-9 Fatty Ac Id Desaturase; Fatty Acid-CoA Desaturase; Acyl-Coa Desaturase; Delta-9-Acyl-Lipid Fatty Acid Desaturase; Fatty Acid Desaturase Protein; Syn-2 Delta 9 Acyl-Lipid Fatty Acid Desaturase; Eucaryotic Stearoyl-CoA 9-Desaturase

Number of amino acids: Translated: 323; Mature: 322

Protein sequence:

>323_residues
MPKFFLRWIDSWSNLNHTQVSTQVYSSQPQRIQWLRIIPFIVLHIACLAVFWIGFSWFAIFFMLGFYVIRMFAITAFFHR
YLSHKTFQTSRPVQFLFILIGTMSAQRGPLWWAAHHRYHHRFTDTDQDPHSSTKGFWYSHVGWFLNEENFAIRKSIIKDW
LKYPELIWLDRFSLPVVLATAFAIYALGEVLAIYAPQLKTNGLQLLVWGFVVSTVLLTHATLCINSLAHRYGSKDFETDD
QSRNNFFLSIITLGEGWHNNHHFYAGSTRQGFFWWQIDVTYYLLKIMSWCGLVWAIKPVPERIYTSSKKSNSLKDKKINI
TNI

Sequences:

>Translated_323_residues
MPKFFLRWIDSWSNLNHTQVSTQVYSSQPQRIQWLRIIPFIVLHIACLAVFWIGFSWFAIFFMLGFYVIRMFAITAFFHR
YLSHKTFQTSRPVQFLFILIGTMSAQRGPLWWAAHHRYHHRFTDTDQDPHSSTKGFWYSHVGWFLNEENFAIRKSIIKDW
LKYPELIWLDRFSLPVVLATAFAIYALGEVLAIYAPQLKTNGLQLLVWGFVVSTVLLTHATLCINSLAHRYGSKDFETDD
QSRNNFFLSIITLGEGWHNNHHFYAGSTRQGFFWWQIDVTYYLLKIMSWCGLVWAIKPVPERIYTSSKKSNSLKDKKINI
TNI
>Mature_322_residues
PKFFLRWIDSWSNLNHTQVSTQVYSSQPQRIQWLRIIPFIVLHIACLAVFWIGFSWFAIFFMLGFYVIRMFAITAFFHRY
LSHKTFQTSRPVQFLFILIGTMSAQRGPLWWAAHHRYHHRFTDTDQDPHSSTKGFWYSHVGWFLNEENFAIRKSIIKDWL
KYPELIWLDRFSLPVVLATAFAIYALGEVLAIYAPQLKTNGLQLLVWGFVVSTVLLTHATLCINSLAHRYGSKDFETDDQ
SRNNFFLSIITLGEGWHNNHHFYAGSTRQGFFWWQIDVTYYLLKIMSWCGLVWAIKPVPERIYTSSKKSNSLKDKKINIT
NI

Specific function: Unknown

COG id: COG1398

COG function: function code I; Fatty-acid desaturase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI53759151, Length=244, Percent_Identity=29.0983606557377, Blast_Score=116, Evalue=3e-26,
Organism=Homo sapiens, GI148596961, Length=307, Percent_Identity=24.1042345276873, Blast_Score=100, Evalue=2e-21,
Organism=Homo sapiens, GI148596938, Length=144, Percent_Identity=25.6944444444444, Blast_Score=73, Evalue=3e-13,
Organism=Caenorhabditis elegans, GI17561776, Length=294, Percent_Identity=28.2312925170068, Blast_Score=131, Evalue=5e-31,
Organism=Caenorhabditis elegans, GI17540878, Length=252, Percent_Identity=29.7619047619048, Blast_Score=127, Evalue=1e-29,
Organism=Caenorhabditis elegans, GI17561774, Length=324, Percent_Identity=25, Blast_Score=110, Evalue=1e-24,
Organism=Saccharomyces cerevisiae, GI6321383, Length=301, Percent_Identity=29.2358803986711, Blast_Score=137, Evalue=2e-33,
Organism=Drosophila melanogaster, GI24646295, Length=257, Percent_Identity=28.0155642023346, Blast_Score=118, Evalue=5e-27,
Organism=Drosophila melanogaster, GI24662393, Length=283, Percent_Identity=25.0883392226148, Blast_Score=115, Evalue=6e-26,
Organism=Drosophila melanogaster, GI24646303, Length=258, Percent_Identity=27.906976744186, Blast_Score=114, Evalue=7e-26,
Organism=Drosophila melanogaster, GI24646299, Length=258, Percent_Identity=27.906976744186, Blast_Score=114, Evalue=7e-26,
Organism=Drosophila melanogaster, GI24646305, Length=258, Percent_Identity=27.906976744186, Blast_Score=114, Evalue=7e-26,
Organism=Drosophila melanogaster, GI24646301, Length=258, Percent_Identity=27.906976744186, Blast_Score=114, Evalue=7e-26,
Organism=Drosophila melanogaster, GI24646297, Length=258, Percent_Identity=27.906976744186, Blast_Score=114, Evalue=7e-26,
Organism=Drosophila melanogaster, GI24646500, Length=262, Percent_Identity=28.6259541984733, Blast_Score=113, Evalue=2e-25,
Organism=Drosophila melanogaster, GI21358573, Length=295, Percent_Identity=28.4745762711864, Blast_Score=112, Evalue=3e-25,
Organism=Drosophila melanogaster, GI21358571, Length=250, Percent_Identity=26, Blast_Score=102, Evalue=3e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38110; Mature: 37978

Theoretical pI: Translated: 10.02; Mature: 10.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPKFFLRWIDSWSNLNHTQVSTQVYSSQPQRIQWLRIIPFIVLHIACLAVFWIGFSWFAI
CCHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FFMLGFYVIRMFAITAFFHRYLSHKTFQTSRPVQFLFILIGTMSAQRGPLWWAAHHRYHH
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEHHHHHHC
RFTDTDQDPHSSTKGFWYSHVGWFLNEENFAIRKSIIKDWLKYPELIWLDRFSLPVVLAT
CCCCCCCCCCCCCCCCCHHHHHHEECCCCHHHHHHHHHHHHCCCCEEEECCCCHHHHHHH
AFAIYALGEVLAIYAPQLKTNGLQLLVWGFVVSTVLLTHATLCINSLAHRYGSKDFETDD
HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
QSRNNFFLSIITLGEGWHNNHHFYAGSTRQGFFWWQIDVTYYLLKIMSWCGLVWAIKPVP
CCCCCEEEEEEEECCCCCCCCCEEECCCCCCEEEEEHHHHHHHHHHHHHHHHHHEECCCC
ERIYTSSKKSNSLKDKKINITNI
HHHHCCCCCCCCCCCCCEEECCC
>Mature Secondary Structure 
PKFFLRWIDSWSNLNHTQVSTQVYSSQPQRIQWLRIIPFIVLHIACLAVFWIGFSWFAI
CHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FFMLGFYVIRMFAITAFFHRYLSHKTFQTSRPVQFLFILIGTMSAQRGPLWWAAHHRYHH
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEHHHHHHC
RFTDTDQDPHSSTKGFWYSHVGWFLNEENFAIRKSIIKDWLKYPELIWLDRFSLPVVLAT
CCCCCCCCCCCCCCCCCHHHHHHEECCCCHHHHHHHHHHHHCCCCEEEECCCCHHHHHHH
AFAIYALGEVLAIYAPQLKTNGLQLLVWGFVVSTVLLTHATLCINSLAHRYGSKDFETDD
HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
QSRNNFFLSIITLGEGWHNNHHFYAGSTRQGFFWWQIDVTYYLLKIMSWCGLVWAIKPVP
CCCCCEEEEEEEECCCCCCCCCEEECCCCCCEEEEEHHHHHHHHHHHHHHHHHHEECCCC
ERIYTSSKKSNSLKDKKINITNI
HHHHCCCCCCCCCCCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA