| Definition | Acinetobacter sp. ADP1 chromosome, complete genome. |
|---|---|
| Accession | NC_005966 |
| Length | 3,598,621 |
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The map label for this gene is gsiB [H]
Identifier: 50084697
GI number: 50084697
Start: 1529494
End: 1531077
Strand: Reverse
Name: gsiB [H]
Synonym: ACIAD1531
Alternate gene names: 50084697
Gene position: 1531077-1529494 (Counterclockwise)
Preceding gene: 50084698
Following gene: 50084692
Centisome position: 42.55
GC content: 41.6
Gene sequence:
>1584_bases ATGACAAATCAAACATTTCAGTTATCACGTCGAAAATTTTTAACACAAAGTCTCACGGCGCTAGGTGGCGTCTCTTTGAT GGGCAGTTTATCAGGTTGTGGCCCCTCTCCAGATAATAGTAACGAATCAAAAAGAGCTTCTTCAGCAACACCTAAGCATG GAGGAGTTATACGCTTGGGACTGATTGGAGGACAACAATCAGGCAGTCTAGATCCTCATCTTTCAGCATCTAGTAGTGGT ATTACACGAGGTTTCGCTATTTATAATAAGTTATGGGAATGGGATGAAAATATGCTGCCCCGACTTGCTTTAGCGGAGTT TGCCGAGCCTAATCACAATGCAAGCGAATGGACCATCCGTTTACGCAAAGGCTTAGAGTTTCATCACGGTAAAACCATTA CCGCTGATGATGTGATCTTTTCAGTGAAACGCCTAACAGACCCTAAACTCGCTTCACCATTTCGTAATCTGGTGCAGTGG ATTGATCGAGATCGTATTCAAAAACTCGATGAATACACAGTTCGTATTCCTTTTATTCGAACGATTCTCGGCTTTGTGGC ACTGCCCGAAACTTGGGTAAACTTTGGAGGAATTGTACCGACCGACTTCGACCCTATTCATAATCCAGTCGGGGCTGGTC CATATAAAGTTCAGGAGTTTATTCCAGGGCAGCGTACTGTTTTTACCCGTTTTAATAACTATTTTAAAGCTGACAAACCT TATGCAGATCGTTTTGAAGTGATTGATTTTAAAGATCAGGTCTCTCGATTAAATGCTTTATTGGCTGGGCAAATTGATGT CGCAAATGCGATTTCTCCTGAGTATATTAAAATTTTGGAGCAAGCAAAACACATTCAAACCATACGCTCTGAGACCAATA CACATAATAGTTTTGACTTTAATACTCAACAAGCGCCGTTTAATGACCCTAGAGTGCGTCAGGCATTTCGTTTGATTGCA AACCGGGAGGAGTTGGTACAACGAGGCTTAAATGGACAAGGTCGAATCGCCAACGATCTTTATTCGCCGCAAGATCCTGC CTTTCTCAATTTGCCACAGCGCCAACAAAATATTGCCGAGGCAAAAAATCTATTAGCGCAAGCAGGTTTTAAAAATGGTT TAAGTGTAGAGCTTGTTACTCCAGTCAGTAGTGCTCAATCTGCACTAATTTTTGCCGAGCAAGCGAAACAAGCCAATGTA AATATTCGAGTGAAACAAGTTGATTTTGCAACGTTTAATGGTCCTAATCGCAGTAAATGGCAACTATCGAGTAATGCGAC TAATGTTGGCACACCCTATTTATCAACTGCCGTTGTTAACGATGCCCCAATTTCCACGACGAATCGTGTGAACTTTAAAG ACCCTGAATACAGTGAATTGTTTTTTAAAGCAATAGCTGAGCCAGATTTAGCCAAACGCAAAATCTATTTAGCTCAAGCA CAAAGAATTCAGCATGAACGTGGTGGCATGCTCATTTGGGGGTTTAGTCATACCATTGACGCTGCAGCTAAAAATATTGG TGGTTTAGCTTCCGAACATACGATTTTTCCAACTTGGCGATTTGAGAAACTCTGGAAAGCTTAA
Upstream 100 bases:
>100_bases TAATTATATAAGTTGTTGATAAATATATTAAAATTATATAAAAATATTGGCATTTATTCTGCAATACCTCAGAAGATGAA GATCTAATCAGGTATTTATA
Downstream 100 bases:
>100_bases TACTCATCTGTAAACTCACTATATAAAAAAAGCTGCCGAAGCAGCTTTTTTTATGGAGACATAATTATTTAGGCACTGTA ATCACAGAGAGTTTATCTAC
Product: oligopeptide binding protein ABC transporter periplasmic substrate-binding protein OppA
Products: ADP; phosphate; oligopeptides [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 527; Mature: 526
Protein sequence:
>527_residues MTNQTFQLSRRKFLTQSLTALGGVSLMGSLSGCGPSPDNSNESKRASSATPKHGGVIRLGLIGGQQSGSLDPHLSASSSG ITRGFAIYNKLWEWDENMLPRLALAEFAEPNHNASEWTIRLRKGLEFHHGKTITADDVIFSVKRLTDPKLASPFRNLVQW IDRDRIQKLDEYTVRIPFIRTILGFVALPETWVNFGGIVPTDFDPIHNPVGAGPYKVQEFIPGQRTVFTRFNNYFKADKP YADRFEVIDFKDQVSRLNALLAGQIDVANAISPEYIKILEQAKHIQTIRSETNTHNSFDFNTQQAPFNDPRVRQAFRLIA NREELVQRGLNGQGRIANDLYSPQDPAFLNLPQRQQNIAEAKNLLAQAGFKNGLSVELVTPVSSAQSALIFAEQAKQANV NIRVKQVDFATFNGPNRSKWQLSSNATNVGTPYLSTAVVNDAPISTTNRVNFKDPEYSELFFKAIAEPDLAKRKIYLAQA QRIQHERGGMLIWGFSHTIDAAAKNIGGLASEHTIFPTWRFEKLWKA
Sequences:
>Translated_527_residues MTNQTFQLSRRKFLTQSLTALGGVSLMGSLSGCGPSPDNSNESKRASSATPKHGGVIRLGLIGGQQSGSLDPHLSASSSG ITRGFAIYNKLWEWDENMLPRLALAEFAEPNHNASEWTIRLRKGLEFHHGKTITADDVIFSVKRLTDPKLASPFRNLVQW IDRDRIQKLDEYTVRIPFIRTILGFVALPETWVNFGGIVPTDFDPIHNPVGAGPYKVQEFIPGQRTVFTRFNNYFKADKP YADRFEVIDFKDQVSRLNALLAGQIDVANAISPEYIKILEQAKHIQTIRSETNTHNSFDFNTQQAPFNDPRVRQAFRLIA NREELVQRGLNGQGRIANDLYSPQDPAFLNLPQRQQNIAEAKNLLAQAGFKNGLSVELVTPVSSAQSALIFAEQAKQANV NIRVKQVDFATFNGPNRSKWQLSSNATNVGTPYLSTAVVNDAPISTTNRVNFKDPEYSELFFKAIAEPDLAKRKIYLAQA QRIQHERGGMLIWGFSHTIDAAAKNIGGLASEHTIFPTWRFEKLWKA >Mature_526_residues TNQTFQLSRRKFLTQSLTALGGVSLMGSLSGCGPSPDNSNESKRASSATPKHGGVIRLGLIGGQQSGSLDPHLSASSSGI TRGFAIYNKLWEWDENMLPRLALAEFAEPNHNASEWTIRLRKGLEFHHGKTITADDVIFSVKRLTDPKLASPFRNLVQWI DRDRIQKLDEYTVRIPFIRTILGFVALPETWVNFGGIVPTDFDPIHNPVGAGPYKVQEFIPGQRTVFTRFNNYFKADKPY ADRFEVIDFKDQVSRLNALLAGQIDVANAISPEYIKILEQAKHIQTIRSETNTHNSFDFNTQQAPFNDPRVRQAFRLIAN REELVQRGLNGQGRIANDLYSPQDPAFLNLPQRQQNIAEAKNLLAQAGFKNGLSVELVTPVSSAQSALIFAEQAKQANVN IRVKQVDFATFNGPNRSKWQLSSNATNVGTPYLSTAVVNDAPISTTNRVNFKDPEYSELFFKAIAEPDLAKRKIYLAQAQ RIQHERGGMLIWGFSHTIDAAAKNIGGLASEHTIFPTWRFEKLWKA
Specific function: Part of the ABC transporter complex gsiABCD involved in glutathione import [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 5 family [H]
Homologues:
Organism=Escherichia coli, GI1787495, Length=478, Percent_Identity=24.0585774058577, Blast_Score=108, Evalue=9e-25, Organism=Escherichia coli, GI1787052, Length=356, Percent_Identity=24.7191011235955, Blast_Score=97, Evalue=3e-21, Organism=Escherichia coli, GI1789966, Length=520, Percent_Identity=23.8461538461538, Blast_Score=93, Evalue=5e-20, Organism=Escherichia coli, GI1787551, Length=518, Percent_Identity=23.9382239382239, Blast_Score=88, Evalue=1e-18, Organism=Escherichia coli, GI87081878, Length=422, Percent_Identity=22.5118483412322, Blast_Score=76, Evalue=6e-15, Organism=Escherichia coli, GI1789887, Length=321, Percent_Identity=25.8566978193146, Blast_Score=76, Evalue=7e-15, Organism=Escherichia coli, GI1789397, Length=481, Percent_Identity=21.8295218295218, Blast_Score=74, Evalue=3e-14,
Paralogues:
None
Copy number: 760 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 380 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 500 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 2360 Molecules/Cell In: Stationary-Phase,
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000914 [H]
Pfam domain/function: PF00496 SBP_bac_5 [H]
EC number: NA
Molecular weight: Translated: 58923; Mature: 58792
Theoretical pI: Translated: 9.99; Mature: 9.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNQTFQLSRRKFLTQSLTALGGVSLMGSLSGCGPSPDNSNESKRASSATPKHGGVIRLG CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCCCCCCCCEEEEE LIGGQQSGSLDPHLSASSSGITRGFAIYNKLWEWDENMLPRLALAEFAEPNHNASEWTIR EECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCHHEEEE LRKGLEFHHGKTITADDVIFSVKRLTDPKLASPFRNLVQWIDRDRIQKLDEYTVRIPFIR EHHCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEHHHHH TILGFVALPETWVNFGGIVPTDFDPIHNPVGAGPYKVQEFIPGQRTVFTRFNNYFKADKP HHHHHHHCCHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHCCCCC YADRFEVIDFKDQVSRLNALLAGQIDVANAISPEYIKILEQAKHIQTIRSETNTHNSFDF CCCCEEEECHHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCC NTQQAPFNDPRVRQAFRLIANREELVQRGLNGQGRIANDLYSPQDPAFLNLPQRQQNIAE CCCCCCCCCHHHHHHHHHHHCHHHHHHCCCCCCCCCHHHCCCCCCCCEECCCHHHHHHHH AKNLLAQAGFKNGLSVELVTPVSSAQSALIFAEQAKQANVNIRVKQVDFATFNGPNRSKW HHHHHHHHCCCCCCEEEEECCCCCCHHHHEEHHHHHCCCCEEEEEEEEEEEECCCCCCEE QLSSNATNVGTPYLSTAVVNDAPISTTNRVNFKDPEYSELFFKAIAEPDLAKRKIYLAQA EECCCCCCCCCCCHHHEEECCCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHH QRIQHERGGMLIWGFSHTIDAAAKNIGGLASEHTIFPTWRFEKLWKA HHHHHHCCCEEEEECHHHHHHHHHHHCCCCCCCEECCCHHHHHHHCC >Mature Secondary Structure TNQTFQLSRRKFLTQSLTALGGVSLMGSLSGCGPSPDNSNESKRASSATPKHGGVIRLG CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCCCCCCCCEEEEE LIGGQQSGSLDPHLSASSSGITRGFAIYNKLWEWDENMLPRLALAEFAEPNHNASEWTIR EECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCHHEEEE LRKGLEFHHGKTITADDVIFSVKRLTDPKLASPFRNLVQWIDRDRIQKLDEYTVRIPFIR EHHCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEHHHHH TILGFVALPETWVNFGGIVPTDFDPIHNPVGAGPYKVQEFIPGQRTVFTRFNNYFKADKP HHHHHHHCCHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHCCCCC YADRFEVIDFKDQVSRLNALLAGQIDVANAISPEYIKILEQAKHIQTIRSETNTHNSFDF CCCCEEEECHHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCC NTQQAPFNDPRVRQAFRLIANREELVQRGLNGQGRIANDLYSPQDPAFLNLPQRQQNIAE CCCCCCCCCHHHHHHHHHHHCHHHHHHCCCCCCCCCHHHCCCCCCCCEECCCHHHHHHHH AKNLLAQAGFKNGLSVELVTPVSSAQSALIFAEQAKQANVNIRVKQVDFATFNGPNRSKW HHHHHHHHCCCCCCEEEEECCCCCCHHHHEEHHHHHCCCCEEEEEEEEEEEECCCCCCEE QLSSNATNVGTPYLSTAVVNDAPISTTNRVNFKDPEYSELFFKAIAEPDLAKRKIYLAQA EECCCCCCCCCCCHHHEEECCCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHH QRIQHERGGMLIWGFSHTIDAAAKNIGGLASEHTIFPTWRFEKLWKA HHHHHHCCCEEEEECHHHHHHHHHHHCCCCCCCEECCCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; oligopeptides [Periplasm]; H2O [C]
Specific reaction: ATP + oligopeptides [Periplasm] + H2O = ADP + phosphate + oligopeptides [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA