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The map label for this gene is bepC [H]

Identifier: 50084658

GI number: 50084658

Start: 1484367

End: 1485779

Strand: Direct

Name: bepC [H]

Synonym: ACIAD1487

Alternate gene names: 50084658

Gene position: 1484367-1485779 (Clockwise)

Preceding gene: 50084657

Following gene: 50084659

Centisome position: 41.25

GC content: 39.35

Gene sequence:

>1413_bases
TTGAAAGAAAAAGTTACTGATTTATTCAAGTCCAAACCAAAAGATGGTTACAAAACTGTCCAGATGCAGAATTTTCAAAC
CGTAAAACTAGATCCAATCATTGTGCAAGGACTACCTCAGGTGAGTTATGGGGCGGTAGCAGTTGATAATAATACGGGTC
CTGTCGAATCAAGGTTAAATGAGATTGGCTTAATTAATGCAGTCCAGATTGCGGTAAAACGTAATCCTTCAATTGGCGAA
GCAATCTCTACTATGGCAGCACAAAATGCCAATATTGATGTCGCACGATCTCAGTATTTTCCTCAGATTACAGGAGGGAT
TAGTACAGGAGGAAATTTATCTTCTTCTGAGCAGCGTGGACGTCAAATGTACACGATTAGTGCAACACAGATGGTATATG
ACTTTGGTAAAGTGAAGTCTAATGTATCTTCCCAAGAAGCAAGGTTGCAGCTCCAACAAGCAAATGTTTTAGTAAGTATT
GATACCATTGCAACTCAAGTTGCGACCACCGTGGTCAACATTGAACGTTATAAAAAATTAGTAGAGATTGCAGAGCAACA
AGTTAAAGGTTTGCAACGTATTCAGAATATTGCAGAATTAAGAGCACAGGCAGGTATTAGCAGTCAAGCTGATCCAGTGC
AGGCAAGGTCTTATGTTGAATCGGCACAGGCTGCGCTCATTGCTCAGCGTTCTTTGCTTCGTCAAAATCAACAACGTTTA
ACCGTATTACTTGGTTTTGATGCTTATGACAAATCTTGGTCAATTCCAGAAGACCTTGTGCAGGTATCTGACTTATATAA
AGAGCCTGATTTTAATATTATCCCAAATATGCTTGTTGCTCAGGCACAAGTTGAAGTCGCTAAAGCAGATAAAAAGCAAA
CAGATTTGAGTCGTTATCCAACACTGTCCTTAGTCGGTTCTGTGAGTCAGGCTGCTAATGGTGTAAACAATAATAATAAC
AAAGAAGATGGTTTCTATAGTTCTGTTTCATTAGAGGCCAATACCAAACTCTATCAGGGTGGTGCTGTTACTGCTCAGAT
TCGATCGGCTGGTTTTGCCGAGGAAGCGGCGAAAGCCAAAGTTAACTCCGTTTATCTAGATGTAATGGATGCTGTAAAAA
CCACACGAGAAAATATCGAAAACAAACAGGAGCAAATTAAGGTATTGCGTGCACGTGAAATTACAGCAGTTAAAACACGC
GAACTTTATCAAGAACAATATAAATTAGGCACTCGTTCTGTCTTGGATCTTTTAAATGCCGAGCAAGCCATCCATTCATC
AATTAATGAGTTGGAAAGTGCCCGTTATGATATTTACTCAAGTCTTGTTCAATATATTTCAACAACGGGACGTTCACGTA
ATGCTTATGACCTGAATAATATTTCAATTCAAGGGTTTGAGGTTCAACCATGA

Upstream 100 bases:

>100_bases
CAAGGGAACCTGCTTGAAAATGTTACTGCTATGCAGTTCAATTTCACTGGTGACGACTTCTGTATTCGCCGAAACATCGG
ATAAACTTAGTTTCAATAAT

Downstream 100 bases:

>100_bases
CCAATAATACATTTAATTATCAACCATGGTTGCAGGCTGTCCTCACCATTGCCAGACATTATCGTATCGAGTCTTCAGAA
GAGCGTATACGTCTCCAGCT

Product: outer membrane efflux protein, type I secretion protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 470; Mature: 470

Protein sequence:

>470_residues
MKEKVTDLFKSKPKDGYKTVQMQNFQTVKLDPIIVQGLPQVSYGAVAVDNNTGPVESRLNEIGLINAVQIAVKRNPSIGE
AISTMAAQNANIDVARSQYFPQITGGISTGGNLSSSEQRGRQMYTISATQMVYDFGKVKSNVSSQEARLQLQQANVLVSI
DTIATQVATTVVNIERYKKLVEIAEQQVKGLQRIQNIAELRAQAGISSQADPVQARSYVESAQAALIAQRSLLRQNQQRL
TVLLGFDAYDKSWSIPEDLVQVSDLYKEPDFNIIPNMLVAQAQVEVAKADKKQTDLSRYPTLSLVGSVSQAANGVNNNNN
KEDGFYSSVSLEANTKLYQGGAVTAQIRSAGFAEEAAKAKVNSVYLDVMDAVKTTRENIENKQEQIKVLRAREITAVKTR
ELYQEQYKLGTRSVLDLLNAEQAIHSSINELESARYDIYSSLVQYISTTGRSRNAYDLNNISIQGFEVQP

Sequences:

>Translated_470_residues
MKEKVTDLFKSKPKDGYKTVQMQNFQTVKLDPIIVQGLPQVSYGAVAVDNNTGPVESRLNEIGLINAVQIAVKRNPSIGE
AISTMAAQNANIDVARSQYFPQITGGISTGGNLSSSEQRGRQMYTISATQMVYDFGKVKSNVSSQEARLQLQQANVLVSI
DTIATQVATTVVNIERYKKLVEIAEQQVKGLQRIQNIAELRAQAGISSQADPVQARSYVESAQAALIAQRSLLRQNQQRL
TVLLGFDAYDKSWSIPEDLVQVSDLYKEPDFNIIPNMLVAQAQVEVAKADKKQTDLSRYPTLSLVGSVSQAANGVNNNNN
KEDGFYSSVSLEANTKLYQGGAVTAQIRSAGFAEEAAKAKVNSVYLDVMDAVKTTRENIENKQEQIKVLRAREITAVKTR
ELYQEQYKLGTRSVLDLLNAEQAIHSSINELESARYDIYSSLVQYISTTGRSRNAYDLNNISIQGFEVQP
>Mature_470_residues
MKEKVTDLFKSKPKDGYKTVQMQNFQTVKLDPIIVQGLPQVSYGAVAVDNNTGPVESRLNEIGLINAVQIAVKRNPSIGE
AISTMAAQNANIDVARSQYFPQITGGISTGGNLSSSEQRGRQMYTISATQMVYDFGKVKSNVSSQEARLQLQQANVLVSI
DTIATQVATTVVNIERYKKLVEIAEQQVKGLQRIQNIAELRAQAGISSQADPVQARSYVESAQAALIAQRSLLRQNQQRL
TVLLGFDAYDKSWSIPEDLVQVSDLYKEPDFNIIPNMLVAQAQVEVAKADKKQTDLSRYPTLSLVGSVSQAANGVNNNNN
KEDGFYSSVSLEANTKLYQGGAVTAQIRSAGFAEEAAKAKVNSVYLDVMDAVKTTRENIENKQEQIKVLRAREITAVKTR
ELYQEQYKLGTRSVLDLLNAEQAIHSSINELESARYDIYSSLVQYISTTGRSRNAYDLNNISIQGFEVQP

Specific function: Involved in the efflux of toxic and relatively hydrophobic compounds. Influences survival inside the host [H]

COG id: COG1538

COG function: function code MU; Outer membrane protein

Gene ontology:

Cell location: Cell outer membrane (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the outer membrane factor (OMF) (TC 1.B.17) family [H]

Homologues:

None

Paralogues:

None

Copy number: 120 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 240 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003423
- InterPro:   IPR010130 [H]

Pfam domain/function: PF02321 OEP [H]

EC number: NA

Molecular weight: Translated: 51805; Mature: 51805

Theoretical pI: Translated: 8.48; Mature: 8.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKEKVTDLFKSKPKDGYKTVQMQNFQTVKLDPIIVQGLPQVSYGAVAVDNNTGPVESRLN
CCHHHHHHHHCCCCCCCEEEEECCCEEEEECHHEECCCCCCCCCEEEECCCCCCHHHHHH
EIGLINAVQIAVKRNPSIGEAISTMAAQNANIDVARSQYFPQITGGISTGGNLSSSEQRG
HCCCHHHEEEEEECCCCHHHHHHHHHHCCCCCEEHHHHCCCHHCCCCCCCCCCCCHHHCC
RQMYTISATQMVYDFGKVKSNVSSQEARLQLQQANVLVSIDTIATQVATTVVNIERYKKL
CEEEEEEHHHHHHHHHHHHCCCCHHHHHHHHHHCCEEEEHHHHHHHHHHHHHHHHHHHHH
VEIAEQQVKGLQRIQNIAELRAQAGISSQADPVQARSYVESAQAALIAQRSLLRQNQQRL
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEE
TVLLGFDAYDKSWSIPEDLVQVSDLYKEPDFNIIPNMLVAQAQVEVAKADKKQTDLSRYP
EEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHCC
TLSLVGSVSQAANGVNNNNNKEDGFYSSVSLEANTKLYQGGAVTAQIRSAGFAEEAAKAK
HHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCEEEECCCEEEHHHHCCCHHHHHHHH
VNSVYLDVMDAVKTTRENIENKQEQIKVLRAREITAVKTRELYQEQYKLGTRSVLDLLNA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
EQAIHSSINELESARYDIYSSLVQYISTTGRSRNAYDLNNISIQGFEVQP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCEEEEEEEECC
>Mature Secondary Structure
MKEKVTDLFKSKPKDGYKTVQMQNFQTVKLDPIIVQGLPQVSYGAVAVDNNTGPVESRLN
CCHHHHHHHHCCCCCCCEEEEECCCEEEEECHHEECCCCCCCCCEEEECCCCCCHHHHHH
EIGLINAVQIAVKRNPSIGEAISTMAAQNANIDVARSQYFPQITGGISTGGNLSSSEQRG
HCCCHHHEEEEEECCCCHHHHHHHHHHCCCCCEEHHHHCCCHHCCCCCCCCCCCCHHHCC
RQMYTISATQMVYDFGKVKSNVSSQEARLQLQQANVLVSIDTIATQVATTVVNIERYKKL
CEEEEEEHHHHHHHHHHHHCCCCHHHHHHHHHHCCEEEEHHHHHHHHHHHHHHHHHHHHH
VEIAEQQVKGLQRIQNIAELRAQAGISSQADPVQARSYVESAQAALIAQRSLLRQNQQRL
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEE
TVLLGFDAYDKSWSIPEDLVQVSDLYKEPDFNIIPNMLVAQAQVEVAKADKKQTDLSRYP
EEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHCC
TLSLVGSVSQAANGVNNNNNKEDGFYSSVSLEANTKLYQGGAVTAQIRSAGFAEEAAKAK
HHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCEEEECCCEEEHHHHCCCHHHHHHHH
VNSVYLDVMDAVKTTRENIENKQEQIKVLRAREITAVKTRELYQEQYKLGTRSVLDLLNA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
EQAIHSSINELESARYDIYSSLVQYISTTGRSRNAYDLNNISIQGFEVQP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 12271122 [H]