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The map label for this gene is algW [H]

Identifier: 50084528

GI number: 50084528

Start: 1342738

End: 1343916

Strand: Direct

Name: algW [H]

Synonym: ACIAD1348

Alternate gene names: 50084528

Gene position: 1342738-1343916 (Clockwise)

Preceding gene: 50084525

Following gene: 50084532

Centisome position: 37.31

GC content: 43.94

Gene sequence:

>1179_bases
GTGCGTCGTACTTTTATATGGTTACCTTGGGTGTTGCTCATCATTGTGATTTTGAGCTTCATTGCATGGCAAAAATCACA
GCAGCCAAAACCTACCATTGCGGCTGATGGCGTAAAGATGCCAGCCGAAAAGGTTGAATCGCTGGTGGATACTTCAAGGT
CGGGAGGAGTGGTGTCTTACAGTGCGGCTGTAAAAGTTGCTGCACCTGCTGTCGTGAATATTTTTACCACACAGAAAGTG
AAGAAGCTCGATCATCCTTTATTGAACGATCCAACGTTTCGTGAGTTCTTTGGCAATCAAGTTCCAAATCAGCTTGACCA
AAAAAATGAAAATAGTTTGGGTTCTGGTGTGATTGTGCGTGCAGATGGTTATATCCTAACAAATAATCACGTGATTGCTC
AGGCCGATCAAATTGTTGTGGCGCTTTATGATGGTAGACGTGCCGAAGCAAAAGTGATTGGTACAGACCCAGATACAGAC
TTGGCTGTCATCAAGATTGACTTGGACAAGCTACCAGTCTTGCCATTCAAATTGAGCGGAAATGAAGTTGGGGATGTAGT
ACTTGCGATTGGGAATCCTTTTGGTGTCGGACAAACTGTCACACAAGGTATCATTTCGGCAACAGGGCGATCAGATCTGG
GCATTAATACGTATGAAGACTTTATCCAGACTGATGCTGCAATTAATCCAGGCAACTCTGGTGGCGCTTTGATTGATGTT
GCCGGAAATTTGGTAGGGATCAATACGGCGATTTTCTCACAATCTGGTGGTTCACTGGGTATCGGATTTGCTATTCCAGC
TCGTGTTTGCCAACAGGTATTAAATTCAATTTTGAAAGATGGTCGTGTGATACGTGGCTGGCTAGGAATTAGTCTGGTTG
CACCTACACAAGACGACGTTTTAGCACCGAAACAGGCGGGTGTGGTGGTAGCTGATGTTCTACAAAATGGACCAGCGGCA
CAAGGTGGCGTGAAAATTGGTGATAAGATTCTTAAAGTGAATGATGAGCAAATCACGTCAGTTTCTCATCTTATTAATTA
TGTTGCTCTACAGCAGCCAGCAAGTATGATTACACTTGAAGTCGAGCGTAATAGTAAACGTGAAAATCTGCGTGTAAAAG
TAGGTGAGCGCAAGACGCAAAATCAGGATTCACAGTATATTCCTTTGCCCAAACGCTAA

Upstream 100 bases:

>100_bases
CAAATCTTTTTTAGGTGTTTAAACCATCCTAGATGATATGCTTTAAAATAACGAAAAATATATTTCCTTCAACACATTAA
AATATTTAGAGGATGTATAC

Downstream 100 bases:

>100_bases
ATAAAACAGATTAATAAAAAAGGAATACTTTGGTATTCCTTTTTTATTATGAATATTTCTTAATTCAAACAGAGAGTTGA
CAATTTTAAAGATATGAATG

Product: HtrA-like serine protease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 392; Mature: 392

Protein sequence:

>392_residues
MRRTFIWLPWVLLIIVILSFIAWQKSQQPKPTIAADGVKMPAEKVESLVDTSRSGGVVSYSAAVKVAAPAVVNIFTTQKV
KKLDHPLLNDPTFREFFGNQVPNQLDQKNENSLGSGVIVRADGYILTNNHVIAQADQIVVALYDGRRAEAKVIGTDPDTD
LAVIKIDLDKLPVLPFKLSGNEVGDVVLAIGNPFGVGQTVTQGIISATGRSDLGINTYEDFIQTDAAINPGNSGGALIDV
AGNLVGINTAIFSQSGGSLGIGFAIPARVCQQVLNSILKDGRVIRGWLGISLVAPTQDDVLAPKQAGVVVADVLQNGPAA
QGGVKIGDKILKVNDEQITSVSHLINYVALQQPASMITLEVERNSKRENLRVKVGERKTQNQDSQYIPLPKR

Sequences:

>Translated_392_residues
MRRTFIWLPWVLLIIVILSFIAWQKSQQPKPTIAADGVKMPAEKVESLVDTSRSGGVVSYSAAVKVAAPAVVNIFTTQKV
KKLDHPLLNDPTFREFFGNQVPNQLDQKNENSLGSGVIVRADGYILTNNHVIAQADQIVVALYDGRRAEAKVIGTDPDTD
LAVIKIDLDKLPVLPFKLSGNEVGDVVLAIGNPFGVGQTVTQGIISATGRSDLGINTYEDFIQTDAAINPGNSGGALIDV
AGNLVGINTAIFSQSGGSLGIGFAIPARVCQQVLNSILKDGRVIRGWLGISLVAPTQDDVLAPKQAGVVVADVLQNGPAA
QGGVKIGDKILKVNDEQITSVSHLINYVALQQPASMITLEVERNSKRENLRVKVGERKTQNQDSQYIPLPKR
>Mature_392_residues
MRRTFIWLPWVLLIIVILSFIAWQKSQQPKPTIAADGVKMPAEKVESLVDTSRSGGVVSYSAAVKVAAPAVVNIFTTQKV
KKLDHPLLNDPTFREFFGNQVPNQLDQKNENSLGSGVIVRADGYILTNNHVIAQADQIVVALYDGRRAEAKVIGTDPDTD
LAVIKIDLDKLPVLPFKLSGNEVGDVVLAIGNPFGVGQTVTQGIISATGRSDLGINTYEDFIQTDAAINPGNSGGALIDV
AGNLVGINTAIFSQSGGSLGIGFAIPARVCQQVLNSILKDGRVIRGWLGISLVAPTQDDVLAPKQAGVVVADVLQNGPAA
QGGVKIGDKILKVNDEQITSVSHLINYVALQQPASMITLEVERNSKRENLRVKVGERKTQNQDSQYIPLPKR

Specific function: Unknown

COG id: COG0265

COG function: function code O; Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PDZ (DHR) domain [H]

Homologues:

Organism=Homo sapiens, GI4506141, Length=263, Percent_Identity=35.361216730038, Blast_Score=130, Evalue=2e-30,
Organism=Homo sapiens, GI22129776, Length=324, Percent_Identity=35.1851851851852, Blast_Score=128, Evalue=1e-29,
Organism=Homo sapiens, GI7019477, Length=341, Percent_Identity=31.9648093841642, Blast_Score=123, Evalue=3e-28,
Organism=Homo sapiens, GI24308541, Length=251, Percent_Identity=34.6613545816733, Blast_Score=115, Evalue=5e-26,
Organism=Escherichia coli, GI1789630, Length=331, Percent_Identity=43.202416918429, Blast_Score=224, Evalue=1e-59,
Organism=Escherichia coli, GI1789629, Length=280, Percent_Identity=45, Blast_Score=217, Evalue=8e-58,
Organism=Escherichia coli, GI1786356, Length=284, Percent_Identity=45.4225352112676, Blast_Score=214, Evalue=5e-57,
Organism=Drosophila melanogaster, GI24646839, Length=286, Percent_Identity=31.4685314685315, Blast_Score=118, Evalue=6e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001478
- InterPro:   IPR009003
- InterPro:   IPR011783
- InterPro:   IPR001254
- InterPro:   IPR001940 [H]

Pfam domain/function: PF00595 PDZ; PF00089 Trypsin [H]

EC number: 3.4.21.-

Molecular weight: Translated: 41994; Mature: 41994

Theoretical pI: Translated: 8.40; Mature: 8.40

Prosite motif: PS50106 PDZ

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRTFIWLPWVLLIIVILSFIAWQKSQQPKPTIAADGVKMPAEKVESLVDTSRSGGVVSY
CCCEEEHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCCCHHHHHHHHHCCCCCCEEEE
SAAVKVAAPAVVNIFTTQKVKKLDHPLLNDPTFREFFGNQVPNQLDQKNENSLGSGVIVR
ECEEEEECCCEEEEHHHHHHHHHCCCCCCCCCHHHHHCCCCCHHHHCCCCCCCCCCEEEE
ADGYILTNNHVIAQADQIVVALYDGRRAEAKVIGTDPDTDLAVIKIDLDKLPVLPFKLSG
ECCEEEECCEEEEECCEEEEEEECCCCCCEEEECCCCCCCEEEEEEECCCCCCEEEEECC
NEVGDVVLAIGNPFGVGQTVTQGIISATGRSDLGINTYEDFIQTDAAINPGNSGGALIDV
CCCCEEEEEECCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCCCCCEEEEE
AGNLVGINTAIFSQSGGSLGIGFAIPARVCQQVLNSILKDGRVIRGWLGISLVAPTQDDV
CCCEEEEEEEEEECCCCCEEECHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEECCCCCCC
LAPKQAGVVVADVLQNGPAAQGGVKIGDKILKVNDEQITSVSHLINYVALQQPASMITLE
CCCCCCCEEEEHHHCCCCCCCCCCEECCEEEEECHHHHHHHHHHHHHHHHCCCCEEEEEE
VERNSKRENLRVKVGERKTQNQDSQYIPLPKR
EECCCCCCCEEEEECCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MRRTFIWLPWVLLIIVILSFIAWQKSQQPKPTIAADGVKMPAEKVESLVDTSRSGGVVSY
CCCEEEHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCCCHHHHHHHHHCCCCCCEEEE
SAAVKVAAPAVVNIFTTQKVKKLDHPLLNDPTFREFFGNQVPNQLDQKNENSLGSGVIVR
ECEEEEECCCEEEEHHHHHHHHHCCCCCCCCCHHHHHCCCCCHHHHCCCCCCCCCCEEEE
ADGYILTNNHVIAQADQIVVALYDGRRAEAKVIGTDPDTDLAVIKIDLDKLPVLPFKLSG
ECCEEEECCEEEEECCEEEEEEECCCCCCEEEECCCCCCCEEEEEEECCCCCCEEEEECC
NEVGDVVLAIGNPFGVGQTVTQGIISATGRSDLGINTYEDFIQTDAAINPGNSGGALIDV
CCCCEEEEEECCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCCCCCEEEEE
AGNLVGINTAIFSQSGGSLGIGFAIPARVCQQVLNSILKDGRVIRGWLGISLVAPTQDDV
CCCEEEEEEEEEECCCCCEEECHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEECCCCCCC
LAPKQAGVVVADVLQNGPAAQGGVKIGDKILKVNDEQITSVSHLINYVALQQPASMITLE
CCCCCCCEEEEHHHCCCCCCCCCCEECCEEEEECHHHHHHHHHHHHHHHHCCCCEEEEEE
VERNSKRENLRVKVGERKTQNQDSQYIPLPKR
EECCCCCCCEEEEECCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on peptide bonds (Peptidases); Serine endopeptidases [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]