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The map label for this gene is ytlI [H]

Identifier: 50084477

GI number: 50084477

Start: 1295436

End: 1296323

Strand: Reverse

Name: ytlI [H]

Synonym: ACIAD1294

Alternate gene names: 50084477

Gene position: 1296323-1295436 (Counterclockwise)

Preceding gene: 50084485

Following gene: 50084475

Centisome position: 36.02

GC content: 37.39

Gene sequence:

>888_bases
ATGGATCTTCAACATTTTCCTGACCTTAAGCTCCTGCGTATTTTTGAAACTGTTGTTAAAAATCAAGGTTTTGCAAACTC
ACAACAGGAACTTAATTTATCAACATCCGCCATCAGTACCTACATGAGTCAGCTTGAGTCCAATGTTGGGATGAAGCTAT
GTGAACGTGGTCGTGGGGGGTTTTCACTCACCTATAAAGGCGAACTTTATTATCAGGAGACGGTGAAACTCCTTCAGGAA
ATTGATAAGTTTGCGTTATACAGTGCTCAAGTCAAAGGTGAGTTAAACGGGATACTCAAAATTGGCATTTTAGACTCAAT
TGTGACTGAAAAGCATTTTCCAATTGATCAGATTATTGGGCAATTTTCTCAGGAAAATCCTTATATTTATATACAGCTTC
AGGTTCACAGTCCATATGAACTCCAAATGGGGGTTTTAGAAAATTGTTATGATTTGGCGGTGGGTGCTTTCTTTTTAAAA
ATGAATGGTATTACTTATCACCCTCTGCACAAAGAGCAACATTGGTTATTTTGTAGTGACAAACATCATTTATTTGAACA
ACGTCATTTGACTGAAAACATGATTACGCAGGAGAAAATGGTTCGTAGGGGTTACTGGAGTCATAGTGAATTGGCTAAAC
ATGGATTCAATAACTCATCTGCATCTGTAGAATCCATGGAAGCACAATTAATTTTGATTTTATCTGGACAATATATTGGT
TATTTACCTGAACATTTTGCTCAATCATGGGTAGACCAAAAACGGCTCAAAGTGTTATTGCCATCTACCTTCGGTTATCA
AGCGCCATTTTCTCTCATTATGCGACGCGGTCGCAGCAAAGATCCAATCATTCAGAAATTCCGCAATATTATGTCGAAAT
ATATTTAG

Upstream 100 bases:

>100_bases
ATACGTATATGCCAAATCGTTTTATTCAATTCATATTTAGTTTTGACATTTCTAAACTAAATAATCTATTTTAAAGATAA
CTTCTATGGGCAGTTATGTT

Downstream 100 bases:

>100_bases
CAGCTAACGACAAAAATCTGCTTTATCTTTTTCAATCAATGATAAAGCAGCATGCCACGCATCCCAAATAATTCCCTCAG
CATCATCCTGCTCAAACTGA

Product: transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 295; Mature: 295

Protein sequence:

>295_residues
MDLQHFPDLKLLRIFETVVKNQGFANSQQELNLSTSAISTYMSQLESNVGMKLCERGRGGFSLTYKGELYYQETVKLLQE
IDKFALYSAQVKGELNGILKIGILDSIVTEKHFPIDQIIGQFSQENPYIYIQLQVHSPYELQMGVLENCYDLAVGAFFLK
MNGITYHPLHKEQHWLFCSDKHHLFEQRHLTENMITQEKMVRRGYWSHSELAKHGFNNSSASVESMEAQLILILSGQYIG
YLPEHFAQSWVDQKRLKVLLPSTFGYQAPFSLIMRRGRSKDPIIQKFRNIMSKYI

Sequences:

>Translated_295_residues
MDLQHFPDLKLLRIFETVVKNQGFANSQQELNLSTSAISTYMSQLESNVGMKLCERGRGGFSLTYKGELYYQETVKLLQE
IDKFALYSAQVKGELNGILKIGILDSIVTEKHFPIDQIIGQFSQENPYIYIQLQVHSPYELQMGVLENCYDLAVGAFFLK
MNGITYHPLHKEQHWLFCSDKHHLFEQRHLTENMITQEKMVRRGYWSHSELAKHGFNNSSASVESMEAQLILILSGQYIG
YLPEHFAQSWVDQKRLKVLLPSTFGYQAPFSLIMRRGRSKDPIIQKFRNIMSKYI
>Mature_295_residues
MDLQHFPDLKLLRIFETVVKNQGFANSQQELNLSTSAISTYMSQLESNVGMKLCERGRGGFSLTYKGELYYQETVKLLQE
IDKFALYSAQVKGELNGILKIGILDSIVTEKHFPIDQIIGQFSQENPYIYIQLQVHSPYELQMGVLENCYDLAVGAFFLK
MNGITYHPLHKEQHWLFCSDKHHLFEQRHLTENMITQEKMVRRGYWSHSELAKHGFNNSSASVESMEAQLILILSGQYIG
YLPEHFAQSWVDQKRLKVLLPSTFGYQAPFSLIMRRGRSKDPIIQKFRNIMSKYI

Specific function: Positively regulates the expression of ytmI operon in response to the availability of sulfur sources [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH lysR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI87081904, Length=276, Percent_Identity=23.5507246376812, Blast_Score=69, Evalue=4e-13,
Organism=Escherichia coli, GI2367136, Length=180, Percent_Identity=25.5555555555556, Blast_Score=62, Evalue=4e-11,
Organism=Escherichia coli, GI1787601, Length=293, Percent_Identity=24.5733788395904, Blast_Score=62, Evalue=4e-11,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000847
- InterPro:   IPR005119
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00126 HTH_1; PF03466 LysR_substrate [H]

EC number: NA

Molecular weight: Translated: 34201; Mature: 34201

Theoretical pI: Translated: 8.11; Mature: 8.11

Prosite motif: PS50931 HTH_LYSR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDLQHFPDLKLLRIFETVVKNQGFANSQQELNLSTSAISTYMSQLESNVGMKLCERGRGG
CCCCCCCCHHHHHHHHHHHHCCCCCCCHHHCCHHHHHHHHHHHHHHHHCCHHHHHCCCCC
FSLTYKGELYYQETVKLLQEIDKFALYSAQVKGELNGILKIGILDSIVTEKHFPIDQIIG
EEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEHHHHHHHHHCCCCHHHHHH
QFSQENPYIYIQLQVHSPYELQMGVLENCYDLAVGAFFLKMNGITYHPLHKEQHWLFCSD
HHCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHEECCEEECCCCCCCCEEEECC
KHHLFEQRHLTENMITQEKMVRRGYWSHSELAKHGFNNSSASVESMEAQLILILSGQYIG
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCHHHHHCEEEEEEECCCHHC
YLPEHFAQSWVDQKRLKVLLPSTFGYQAPFSLIMRRGRSKDPIIQKFRNIMSKYI
CCHHHHHHHHHHHHHHEEECCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHCC
>Mature Secondary Structure
MDLQHFPDLKLLRIFETVVKNQGFANSQQELNLSTSAISTYMSQLESNVGMKLCERGRGG
CCCCCCCCHHHHHHHHHHHHCCCCCCCHHHCCHHHHHHHHHHHHHHHHCCHHHHHCCCCC
FSLTYKGELYYQETVKLLQEIDKFALYSAQVKGELNGILKIGILDSIVTEKHFPIDQIIG
EEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEHHHHHHHHHCCCCHHHHHH
QFSQENPYIYIQLQVHSPYELQMGVLENCYDLAVGAFFLKMNGITYHPLHKEQHWLFCSD
HHCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHEECCEEECCCCCCCCEEEECC
KHHLFEQRHLTENMITQEKMVRRGYWSHSELAKHGFNNSSASVESMEAQLILILSGQYIG
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCHHHHHCEEEEEEECCCHHC
YLPEHFAQSWVDQKRLKVLLPSTFGYQAPFSLIMRRGRSKDPIIQKFRNIMSKYI
CCHHHHHHHHHHHHHHEEECCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]