Click here to switch to the map view.

The map label for this gene is yceJ [H]

Identifier: 50084432

GI number: 50084432

Start: 1246277

End: 1246831

Strand: Reverse

Name: yceJ [H]

Synonym: ACIAD1246

Alternate gene names: 50084432

Gene position: 1246831-1246277 (Counterclockwise)

Preceding gene: 50084435

Following gene: 50084428

Centisome position: 34.65

GC content: 37.12

Gene sequence:

>555_bases
ATGTCTAACTCTAGCCAGTATTACACCCGCACTGCGCAGTTTTTACACTGGATCATGGCAATTATTTTTATTAGCGCATG
GATTATTGGATTTTATAGCGGTAATTTTCTAAATTATGAGACGGATGGGAGTTTTAAAGGGGATGTGATTACTTTACATA
AGAACATTGCGACTACGATTATCTTCTTGGTAATGATACGTATTTTCTGGCGTTACACACATCCTACGCCAGAGTTACCA
GCGACAATGTCACCGCTTATGAAAAAATTGGCACATTTAGGTCATCTTGCATTATATGTAATATTAATTGCATTACCCAT
TAGTGGATGCTTTTACAGTTGGAGCGCAGGCCATCCAGCACCCGTACTTTATTTATTCAATATTCCTCAATTAATTGGTG
AGAATCCTGAAATCATGGCTATTGCAAAACCAGTCCATGTTTATCTATCATGGTTTGCAGGTTTGATGGTTGCAGGTCAT
ATTCTTGCTGCACTCAAACATCATTTTATTGATAAAGATAATGTTCTTAAGAGCATGATCAAACAATCTCGTTGA

Upstream 100 bases:

>100_bases
TCTATTTAAAATACGCTTCGTTACAACTCCTTCGTTTTAAACAGCATTTTTTCCGTTTATTCTCGCTAAATATTTAGCAA
TTGAACAGGACATAAAATTC

Downstream 100 bases:

>100_bases
ACATCGGGTATTTATAGACATAAAAAATGCATCTTTTAAGATGCATTTTTTTATTTAAATCTGGTTGATTTCTTCAATCC
AGTTTTGTTTCTCTTCTTCA

Product: cytochrome

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 184; Mature: 183

Protein sequence:

>184_residues
MSNSSQYYTRTAQFLHWIMAIIFISAWIIGFYSGNFLNYETDGSFKGDVITLHKNIATTIIFLVMIRIFWRYTHPTPELP
ATMSPLMKKLAHLGHLALYVILIALPISGCFYSWSAGHPAPVLYLFNIPQLIGENPEIMAIAKPVHVYLSWFAGLMVAGH
ILAALKHHFIDKDNVLKSMIKQSR

Sequences:

>Translated_184_residues
MSNSSQYYTRTAQFLHWIMAIIFISAWIIGFYSGNFLNYETDGSFKGDVITLHKNIATTIIFLVMIRIFWRYTHPTPELP
ATMSPLMKKLAHLGHLALYVILIALPISGCFYSWSAGHPAPVLYLFNIPQLIGENPEIMAIAKPVHVYLSWFAGLMVAGH
ILAALKHHFIDKDNVLKSMIKQSR
>Mature_183_residues
SNSSQYYTRTAQFLHWIMAIIFISAWIIGFYSGNFLNYETDGSFKGDVITLHKNIATTIIFLVMIRIFWRYTHPTPELPA
TMSPLMKKLAHLGHLALYVILIALPISGCFYSWSAGHPAPVLYLFNIPQLIGENPEIMAIAKPVHVYLSWFAGLMVAGHI
LAALKHHFIDKDNVLKSMIKQSR

Specific function: Unknown

COG id: COG3038

COG function: function code C; Cytochrome B561

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome b561 family [H]

Homologues:

Organism=Escherichia coli, GI1787296, Length=182, Percent_Identity=32.967032967033, Blast_Score=101, Evalue=3e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005797
- InterPro:   IPR016174 [H]

Pfam domain/function: PF00033 Cytochrom_B_N [H]

EC number: NA

Molecular weight: Translated: 20894; Mature: 20763

Theoretical pI: Translated: 9.68; Mature: 9.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNSSQYYTRTAQFLHWIMAIIFISAWIIGFYSGNFLNYETDGSFKGDVITLHKNIATTI
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCEEEEHHHHHHHH
IFLVMIRIFWRYTHPTPELPATMSPLMKKLAHLGHLALYVILIALPISGCFYSWSAGHPA
HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCC
PVLYLFNIPQLIGENPEIMAIAKPVHVYLSWFAGLMVAGHILAALKHHFIDKDNVLKSMI
CEEEEECCHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
KQSR
HHCC
>Mature Secondary Structure 
SNSSQYYTRTAQFLHWIMAIIFISAWIIGFYSGNFLNYETDGSFKGDVITLHKNIATTI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCEEEEHHHHHHHH
IFLVMIRIFWRYTHPTPELPATMSPLMKKLAHLGHLALYVILIALPISGCFYSWSAGHPA
HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCC
PVLYLFNIPQLIGENPEIMAIAKPVHVYLSWFAGLMVAGHILAALKHHFIDKDNVLKSMI
CEEEEECCHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
KQSR
HHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]