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The map label for this gene is nudC [H]

Identifier: 50084329

GI number: 50084329

Start: 1121639

End: 1122388

Strand: Reverse

Name: nudC [H]

Synonym: ACIAD1135

Alternate gene names: 50084329

Gene position: 1122388-1121639 (Counterclockwise)

Preceding gene: 50084330

Following gene: 50084324

Centisome position: 31.19

GC content: 40.27

Gene sequence:

>750_bases
ATGTCTGAGTTATCACTTGCTTATATTTTTCATAATCAACAACTTCTTGTAAATGAAAAGCTAGAACTACCCAAAGTTGA
AACCTTAGCAAGTGATTTACAATTTGGAAGCGGTGATAACGTCATTGCACGAGATTTAGGCGCTGATGAAACAATTCCTG
AAGGCTGGCATCTGGTTTCTATTCGCCAACTGATTTCATCATGGTCAACTGAAGAATTCATGCGTGCTAGTCGTGCCGTA
CAATTGCTCGAATGGCGCCGCAATCACAAATTTTGTAGTCACTGTGGCCATGAAACAGAAATCCATCCTACCGAATACGC
CATGGTATGTCCTGCTTGTCAATATCGCCAGTATCCACGTGTTCAACCTTGTGTAATTACTGTCATTACCCGAGGTGATA
ATGAAATTCTACTGGCTAAGAATGCCAATAATAAAAGTAACATGTATGGATTAATTGCAGGTTTTGTCGAAGTTGCAGAA
ACTCTCGAAGAGGCAGTGCAACGAGAAACGCTTGAAGAAGTGGGTTTAAAGCTTAAAAATATTCGCTATCTGGCCAGCCA
GCCTTGGCCTTTTCCAAGTAATTTAATGCTGGCCTTTCATGCCGAATATGAATCAGGTGATATCAAACTTCAGGAGGAAG
AAATTAGCGACGCTCAATTCTTTAAATTTGATCAGTTGCCAGAAATTCCTTTTAAAGGAAGTATCGCCCACGCCATGATT
ATGCATGTGATTCAAAAACAGCCCATTTAA

Upstream 100 bases:

>100_bases
ACCTTTTTGTAGACAATTTAAAAACCAAACAGCCTGTTTTAAAATCAACCTTTGAGGTAGCATTAAGAAACGCCTCCCAA
TTTCAATCAACGGTTGCCTA

Downstream 100 bases:

>100_bases
TGGGCTGTTTTTTACGCTGGGTGCGTTTCTTTTAATAAGTTTAATAATGTACGTTTAGTCTTAAAATACTGACTAAACAG
GCTTGATAATGTCGCAATAA

Product: NUDIX family NADH pyrophosphatase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 249; Mature: 248

Protein sequence:

>249_residues
MSELSLAYIFHNQQLLVNEKLELPKVETLASDLQFGSGDNVIARDLGADETIPEGWHLVSIRQLISSWSTEEFMRASRAV
QLLEWRRNHKFCSHCGHETEIHPTEYAMVCPACQYRQYPRVQPCVITVITRGDNEILLAKNANNKSNMYGLIAGFVEVAE
TLEEAVQRETLEEVGLKLKNIRYLASQPWPFPSNLMLAFHAEYESGDIKLQEEEISDAQFFKFDQLPEIPFKGSIAHAMI
MHVIQKQPI

Sequences:

>Translated_249_residues
MSELSLAYIFHNQQLLVNEKLELPKVETLASDLQFGSGDNVIARDLGADETIPEGWHLVSIRQLISSWSTEEFMRASRAV
QLLEWRRNHKFCSHCGHETEIHPTEYAMVCPACQYRQYPRVQPCVITVITRGDNEILLAKNANNKSNMYGLIAGFVEVAE
TLEEAVQRETLEEVGLKLKNIRYLASQPWPFPSNLMLAFHAEYESGDIKLQEEEISDAQFFKFDQLPEIPFKGSIAHAMI
MHVIQKQPI
>Mature_248_residues
SELSLAYIFHNQQLLVNEKLELPKVETLASDLQFGSGDNVIARDLGADETIPEGWHLVSIRQLISSWSTEEFMRASRAVQ
LLEWRRNHKFCSHCGHETEIHPTEYAMVCPACQYRQYPRVQPCVITVITRGDNEILLAKNANNKSNMYGLIAGFVEVAET
LEEAVQRETLEEVGLKLKNIRYLASQPWPFPSNLMLAFHAEYESGDIKLQEEEISDAQFFKFDQLPEIPFKGSIAHAMIM
HVIQKQPI

Specific function: Unknown

COG id: COG2816

COG function: function code L; NTP pyrophosphohydrolases containing a Zn-finger, probably nucleic-acid-binding

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 nudix hydrolase domain [H]

Homologues:

Organism=Homo sapiens, GI13899267, Length=192, Percent_Identity=34.8958333333333, Blast_Score=119, Evalue=3e-27,
Organism=Homo sapiens, GI50593112, Length=193, Percent_Identity=33.6787564766839, Blast_Score=114, Evalue=1e-25,
Organism=Escherichia coli, GI48994995, Length=181, Percent_Identity=48.0662983425414, Blast_Score=189, Evalue=1e-49,
Organism=Caenorhabditis elegans, GI71986510, Length=189, Percent_Identity=29.1005291005291, Blast_Score=87, Evalue=8e-18,
Organism=Caenorhabditis elegans, GI212645999, Length=189, Percent_Identity=29.1005291005291, Blast_Score=87, Evalue=8e-18,
Organism=Saccharomyces cerevisiae, GI6321371, Length=226, Percent_Identity=30.0884955752212, Blast_Score=89, Evalue=7e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015375
- InterPro:   IPR022925
- InterPro:   IPR020084
- InterPro:   IPR000086
- InterPro:   IPR015797
- InterPro:   IPR015376 [H]

Pfam domain/function: PF00293 NUDIX; PF09296 NUDIX-like; PF09297 zf-NADH-PPase [H]

EC number: =3.6.1.22 [H]

Molecular weight: Translated: 28476; Mature: 28345

Theoretical pI: Translated: 5.03; Mature: 5.03

Prosite motif: PS00893 NUDIX

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSELSLAYIFHNQQLLVNEKLELPKVETLASDLQFGSGDNVIARDLGADETIPEGWHLVS
CCCCEEEEEEECCEEEECCCCCCCHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCHHHH
IRQLISSWSTEEFMRASRAVQLLEWRRNHKFCSHCGHETEIHPTEYAMVCPACQYRQYPR
HHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCEEEECCCHHHCCCCC
VQPCVITVITRGDNEILLAKNANNKSNMYGLIAGFVEVAETLEEAVQRETLEEVGLKLKN
CCCEEEEEEECCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
IRYLASQPWPFPSNLMLAFHAEYESGDIKLQEEEISDAQFFKFDQLPEIPFKGSIAHAMI
HHHHHCCCCCCCCCEEEEEEEECCCCCEEEEHHHCCCCHHEECCCCCCCCCCCCHHHHHH
MHVIQKQPI
HHHHHHCCC
>Mature Secondary Structure 
SELSLAYIFHNQQLLVNEKLELPKVETLASDLQFGSGDNVIARDLGADETIPEGWHLVS
CCCEEEEEEECCEEEECCCCCCCHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCHHHH
IRQLISSWSTEEFMRASRAVQLLEWRRNHKFCSHCGHETEIHPTEYAMVCPACQYRQYPR
HHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCEEEECCCHHHCCCCC
VQPCVITVITRGDNEILLAKNANNKSNMYGLIAGFVEVAETLEEAVQRETLEEVGLKLKN
CCCEEEEEEECCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
IRYLASQPWPFPSNLMLAFHAEYESGDIKLQEEEISDAQFFKFDQLPEIPFKGSIAHAMI
HHHHHCCCCCCCCCEEEEEEEECCCCCEEEEHHHCCCCHHEECCCCCCCCCCCCHHHHHH
MHVIQKQPI
HHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA