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The map label for this gene is yraP [C]

Identifier: 50084327

GI number: 50084327

Start: 1120058

End: 1120753

Strand: Direct

Name: yraP [C]

Synonym: ACIAD1133

Alternate gene names: 50084327

Gene position: 1120058-1120753 (Clockwise)

Preceding gene: 50084326

Following gene: 50084328

Centisome position: 31.12

GC content: 41.67

Gene sequence:

>696_bases
GTGTTTAAGCGAATTGCAGTAACGATGGTATGCGTAGCAAGTTTATCTGGTTGTGCGAGTTTTATTTCTGGCGGAACGGG
TTCTGCGCCTGTAGGAACAGAAAGTGGTGCGCGTAGTTTAGGCCAAGTGTTTATTGACTCTTCTATTAAACGAACAGCGA
GTATCAATCTTTATAAACTTGATCCGCGTTTTAAACAATCTCGCGTCAATATTGAAAGCTTTCATAGCAACGTTCTTTTG
ACAGGACAAGTTGCTGATGAAAACTTGCGACAGTTGGCCGAAGATAATGTGAAATCCATGAGTGATGTAAAAACGGTACA
TAATTATATTACCGTTGGTCCACAGATTGGATATTCCACGATTATGCAAGATACGGCTGTAACAGCGAATACACGTGCTT
TACTCATGCGTGCGCCTGTAGTATCTGACAATAAAGTCATGTTGCATACCGAGGATGGTGTACTTTACGTTATGGGACGT
TTAAACAACGCTGAAATTGCGGACTTGAATGATGTATTACAAAAGGTAGGGAATGTCACCAAAATTGTGACATTGATTGA
TAATATTGAACAACCTGCTAATGGGACCGTGACCAGCTCTACTATGGCAACGCCTTTAGTCAACAATACCCAGCCTGTAG
TGCAAACCCCTGTAGCGATTGATCCTGATCAAGGTACACCAACGAATGCTCAATAA

Upstream 100 bases:

>100_bases
GCATTTACTTTGTAATCAGAGTTTATTAATCTTTGGATGATGTAAATGCCTAAAAAATCAGTACATTGTTTTTAAGCGAG
TTGATAGGGAGTCTTGCGCA

Downstream 100 bases:

>100_bases
TCCACAATTTTATGTCGAGCAATTGAACAAACAGATTGAACGTGTCAAAGAGCAATATAAATCATTTCGTTTCTATGATC
TGGGAAGTTATGCACTCAAC

Product: signal peptide

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 231; Mature: 231

Protein sequence:

>231_residues
MFKRIAVTMVCVASLSGCASFISGGTGSAPVGTESGARSLGQVFIDSSIKRTASINLYKLDPRFKQSRVNIESFHSNVLL
TGQVADENLRQLAEDNVKSMSDVKTVHNYITVGPQIGYSTIMQDTAVTANTRALLMRAPVVSDNKVMLHTEDGVLYVMGR
LNNAEIADLNDVLQKVGNVTKIVTLIDNIEQPANGTVTSSTMATPLVNNTQPVVQTPVAIDPDQGTPTNAQ

Sequences:

>Translated_231_residues
MFKRIAVTMVCVASLSGCASFISGGTGSAPVGTESGARSLGQVFIDSSIKRTASINLYKLDPRFKQSRVNIESFHSNVLL
TGQVADENLRQLAEDNVKSMSDVKTVHNYITVGPQIGYSTIMQDTAVTANTRALLMRAPVVSDNKVMLHTEDGVLYVMGR
LNNAEIADLNDVLQKVGNVTKIVTLIDNIEQPANGTVTSSTMATPLVNNTQPVVQTPVAIDPDQGTPTNAQ
>Mature_231_residues
MFKRIAVTMVCVASLSGCASFISGGTGSAPVGTESGARSLGQVFIDSSIKRTASINLYKLDPRFKQSRVNIESFHSNVLL
TGQVADENLRQLAEDNVKSMSDVKTVHNYITVGPQIGYSTIMQDTAVTANTRALLMRAPVVSDNKVMLHTEDGVLYVMGR
LNNAEIADLNDVLQKVGNVTKIVTLIDNIEQPANGTVTSSTMATPLVNNTQPVVQTPVAIDPDQGTPTNAQ

Specific function: Unknown

COG id: COG2823

COG function: function code R; Predicted periplasmic or secreted lipoprotein

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 BON domains [H]

Homologues:

Organism=Escherichia coli, GI1789540, Length=170, Percent_Identity=25.8823529411765, Blast_Score=61, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007055
- InterPro:   IPR014004 [H]

Pfam domain/function: PF04972 BON [H]

EC number: NA

Molecular weight: Translated: 24680; Mature: 24680

Theoretical pI: Translated: 6.26; Mature: 6.26

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50914 BON

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFKRIAVTMVCVASLSGCASFISGGTGSAPVGTESGARSLGQVFIDSSIKRTASINLYKL
CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHEEEEEEE
DPRFKQSRVNIESFHSNVLLTGQVADENLRQLAEDNVKSMSDVKTVHNYITVGPQIGYST
CCCHHHHHCCHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCHHH
IMQDTAVTANTRALLMRAPVVSDNKVMLHTEDGVLYVMGRLNNAEIADLNDVLQKVGNVT
HHHHHCCCCCCCEEEEECCCCCCCEEEEEECCCEEEEEECCCCCCCHHHHHHHHHHCCHH
KIVTLIDNIEQPANGTVTSSTMATPLVNNTQPVVQTPVAIDPDQGTPTNAQ
HHHHHHHHCCCCCCCCEECCHHCCCCCCCCCCCEECCEEECCCCCCCCCCC
>Mature Secondary Structure
MFKRIAVTMVCVASLSGCASFISGGTGSAPVGTESGARSLGQVFIDSSIKRTASINLYKL
CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHEEEEEEE
DPRFKQSRVNIESFHSNVLLTGQVADENLRQLAEDNVKSMSDVKTVHNYITVGPQIGYST
CCCHHHHHCCHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCHHH
IMQDTAVTANTRALLMRAPVVSDNKVMLHTEDGVLYVMGRLNNAEIADLNDVLQKVGNVT
HHHHHCCCCCCCEEEEECCCCCCCEEEEEECCCEEEEEECCCCCCCHHHHHHHHHHCCHH
KIVTLIDNIEQPANGTVTSSTMATPLVNNTQPVVQTPVAIDPDQGTPTNAQ
HHHHHHHHCCCCCCCCEECCHHCCCCCCCCCCCEECCEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]