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The map label for this gene is betI [H]

Identifier: 50084213

GI number: 50084213

Start: 1000061

End: 1000687

Strand: Reverse

Name: betI [H]

Synonym: ACIAD1010

Alternate gene names: 50084213

Gene position: 1000687-1000061 (Counterclockwise)

Preceding gene: 50084217

Following gene: 50084212

Centisome position: 27.81

GC content: 43.54

Gene sequence:

>627_bases
ATGAATAAACGCAGAGTTAAACCCGAGCACGTGCGTCGTGAAGAAATTGTAAATGCCGCTTACGAAGTCATTTTTGAAGT
GGGATTATCCAATACCACGATGGCTCAAATTGCAAAAAAGGCCCAGCTCTCAGTGGGCATTGTGAGTCACTATTTTGGTG
ATAAACAAGGTTTGATTAACGCCTGCATGCTGGAAATGTTAAATGTGTTACGGCGTAAAACAGCACAATACAAGGCAGAA
GTCCAAGACTCACATCCTGAGAGCATGATTAAGGCGATTATTGACTCTAATTTCGACATTAGTCAGGTCAATCAAAGAGC
AATGCGCATCTGGCTCGATTTCTGGTCGGCCAGTATGCATATGCCAGAGCTCAGTCGCCTACAAAGAATTAATGACCAAC
GGCTCTACTCCAATCTGAAATTTCACTTTCTGGAGTTGATGCCCAAAGATCAGGCCAGTATTGCAGCACGTGGGCTTGCA
GCCTTGATCGATGGTCTTTGGCTACGTGGTAGTTTGAGTCAGGATACAACATTTGACAGTACGCTGGCTCGATCTATTGC
ATATGACTATGTAGATACACAATTAAAGCTAGTGAAACAAATCAGGCAGGAGAGACAAAATGAGTGA

Upstream 100 bases:

>100_bases
ATTGATTGAACGTTCAATCAATAAAAAGTATCATGAAAAAGTGTTATCATGTGTCATGAATGCTAAATACAAGCAAAACC
TTATATTTTTAAGGACCTAC

Downstream 100 bases:

>100_bases
TGTAAAACTTCATCGTTTATATATCCATGGACAATATACAGATGCAACCAGTGGCAAAACATTTGACAGCATCAACCCTG
CAACAGGTGAAGTCATTGCC

Product: BetI family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 208; Mature: 208

Protein sequence:

>208_residues
MNKRRVKPEHVRREEIVNAAYEVIFEVGLSNTTMAQIAKKAQLSVGIVSHYFGDKQGLINACMLEMLNVLRRKTAQYKAE
VQDSHPESMIKAIIDSNFDISQVNQRAMRIWLDFWSASMHMPELSRLQRINDQRLYSNLKFHFLELMPKDQASIAARGLA
ALIDGLWLRGSLSQDTTFDSTLARSIAYDYVDTQLKLVKQIRQERQNE

Sequences:

>Translated_208_residues
MNKRRVKPEHVRREEIVNAAYEVIFEVGLSNTTMAQIAKKAQLSVGIVSHYFGDKQGLINACMLEMLNVLRRKTAQYKAE
VQDSHPESMIKAIIDSNFDISQVNQRAMRIWLDFWSASMHMPELSRLQRINDQRLYSNLKFHFLELMPKDQASIAARGLA
ALIDGLWLRGSLSQDTTFDSTLARSIAYDYVDTQLKLVKQIRQERQNE
>Mature_208_residues
MNKRRVKPEHVRREEIVNAAYEVIFEVGLSNTTMAQIAKKAQLSVGIVSHYFGDKQGLINACMLEMLNVLRRKTAQYKAE
VQDSHPESMIKAIIDSNFDISQVNQRAMRIWLDFWSASMHMPELSRLQRINDQRLYSNLKFHFLELMPKDQASIAARGLA
ALIDGLWLRGSLSQDTTFDSTLARSIAYDYVDTQLKLVKQIRQERQNE

Specific function: Repressor involved in choline regulation of the bet genes [H]

COG id: COG1309

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH tetR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1786505, Length=187, Percent_Identity=42.7807486631016, Blast_Score=158, Evalue=2e-40,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR015893
- InterPro:   IPR011075
- InterPro:   IPR017757
- InterPro:   IPR001647 [H]

Pfam domain/function: PF00440 TetR_N [H]

EC number: NA

Molecular weight: Translated: 24018; Mature: 24018

Theoretical pI: Translated: 9.60; Mature: 9.60

Prosite motif: PS01081 HTH_TETR_1 ; PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKRRVKPEHVRREEIVNAAYEVIFEVGLSNTTMAQIAKKAQLSVGIVSHYFGDKQGLIN
CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
ACMLEMLNVLRRKTAQYKAEVQDSHPESMIKAIIDSNFDISQVNQRAMRIWLDFWSASMH
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCC
MPELSRLQRINDQRLYSNLKFHFLELMPKDQASIAARGLAALIDGLWLRGSLSQDTTFDS
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHH
TLARSIAYDYVDTQLKLVKQIRQERQNE
HHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNKRRVKPEHVRREEIVNAAYEVIFEVGLSNTTMAQIAKKAQLSVGIVSHYFGDKQGLIN
CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
ACMLEMLNVLRRKTAQYKAEVQDSHPESMIKAIIDSNFDISQVNQRAMRIWLDFWSASMH
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCC
MPELSRLQRINDQRLYSNLKFHFLELMPKDQASIAARGLAALIDGLWLRGSLSQDTTFDS
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHH
TLARSIAYDYVDTQLKLVKQIRQERQNE
HHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA