| Definition | Acinetobacter sp. ADP1 chromosome, complete genome. |
|---|---|
| Accession | NC_005966 |
| Length | 3,598,621 |
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The map label for this gene is 50084204
Identifier: 50084204
GI number: 50084204
Start: 987410
End: 988753
Strand: Direct
Name: 50084204
Synonym: ACIAD1001
Alternate gene names: NA
Gene position: 987410-988753 (Clockwise)
Preceding gene: 50084203
Following gene: 50084207
Centisome position: 27.44
GC content: 42.41
Gene sequence:
>1344_bases ATGGCCGCTTCTCAATCTTCTGCAACATTCTGGCGTGATTTACTTGTTCTGTTACATCGCTATGCAGGTATTTTTATTGC ACCATTTATTTTTGTTGCAGCCTTTACAGGCTTACTCTACGTGCTTACCCCACAGTTAGAGCAATGGACTTATCGCGATG TATTAGTGAGCCAAGCCACATCTCAACCGAAATCTTTAACCGAACAGATTCAGGCTGCCCAATCGGTGATGTCTCCGACA GCACAAATTATGGCAGTCAGGCCAGCCGCTACATCGCATGATACCACCCGTGTGATCTATTCTGATCCTCAACAGCAGAT GGCTAATCGAGCCATTTTTATCGATCCACATGATTTAAAAGTAAAGGGACAGCTTGCAGTGTATGGGACCAGTGGGATTT TACCTTTAAGAACATTTCTGGATCGTTTACATCGTGATTTATGGCTTGGAGAGTGGGGCCGAATATACAGTGAACTTGCT GCCAGCTGGATGGGATTACTGGCACTCTCAGGAATTTATCACTGGTTTAAGCGCCGTAAACAACTGAATCAACCGTCTGA GCATAAAAAACTTTATTTAATTAAATGGCACAGTTGGCTAGGTTTGGCTTTATTACCTTTACTTTTATTTTTCTCGATTA CTGGATTGACTTGGTCGAATTGGGCCGGCTCAAATATTTTAAGTATGCGTCAATGGTTAGGCTGGCAAACGCCAAGTCTC ATCACCTCATTGTCAGCAGATTCTATTTCCAAGCCAGATATGCATCAGGAGCATCATGCCAGTATGATCATGCATATGCA CAGTATGGTCGATGCCAAAGATTTCTCTGATGCATTACAACTGGCACGCGACAATGGAATTACAGCCGCCAAAGTACAAA TTCGCCCTCCTGTGGCAATGAGTCAGGCATGGGTGGTTGAAGAAATTGATCGCAGTTGGCCGACGCAAGTCGATAGTATC GCGGTTGATATTGTTCAACACAAAGTGATTGATCATGTTTATTTCGATCAATTTCCTTTAGCTGCAAAGTTAACGCGCTG GGGCGTCGATGCCCATATGGGTGTTCTGTTTGGCTGGACAAATCAACTGTTATTAATTTTGTTTGCTATAGGCTTATGTA TCACGATTGTGCTTGCTTACCGTATATGGTGGCAAACTACAGATTTTAAGAAAACCACGATTGATTTTTCTAGACGTGCT GTGGTCATGTGGAGCAATGGCAGTCTTATTCAAAGAGTTGGCTTAGTTTTCATTCTGATGGTCACTGGTATTTCTTTACC TATCTTTGGAGTCAGTATTTTAATGGCTTTGATGATGGTGATGCTGGGATATAAAAAAGTTTAA
Upstream 100 bases:
>100_bases AATCAGCAGCCCTGTTTTGTGGTCTTTTTTAAGATGCAAAATTAAGATTGTGACTATAAATTCAACTATAATGGCGCGGT TCTATTTTTTGTCTCTGTGT
Downstream 100 bases:
>100_bases GCCGACTTAAACATGTGAATGGTGTCATAATTTTGAATTTCTTCACGATGAATGACATCAAATCCCTGTTTTGTCCAAAA ATACTCTGCCGCAGGTAAAA
Product: iron-regulated membrane protein
Products: NA
Alternate protein names: Iron-Regulated Membrane Protein; PepSY-Associated TM Helix Domain-Containing Protein; PepSY-Associated TM Helix Domain Protein; PepSY-Associated TM Helix Family Protein; Peptidase; PepSY-Associated TM Helix Family; Conserved Iron-Regulated Membrane Protein; PepSY-Associated TM Helix
Number of amino acids: Translated: 447; Mature: 446
Protein sequence:
>447_residues MAASQSSATFWRDLLVLLHRYAGIFIAPFIFVAAFTGLLYVLTPQLEQWTYRDVLVSQATSQPKSLTEQIQAAQSVMSPT AQIMAVRPAATSHDTTRVIYSDPQQQMANRAIFIDPHDLKVKGQLAVYGTSGILPLRTFLDRLHRDLWLGEWGRIYSELA ASWMGLLALSGIYHWFKRRKQLNQPSEHKKLYLIKWHSWLGLALLPLLLFFSITGLTWSNWAGSNILSMRQWLGWQTPSL ITSLSADSISKPDMHQEHHASMIMHMHSMVDAKDFSDALQLARDNGITAAKVQIRPPVAMSQAWVVEEIDRSWPTQVDSI AVDIVQHKVIDHVYFDQFPLAAKLTRWGVDAHMGVLFGWTNQLLLILFAIGLCITIVLAYRIWWQTTDFKKTTIDFSRRA VVMWSNGSLIQRVGLVFILMVTGISLPIFGVSILMALMMVMLGYKKV
Sequences:
>Translated_447_residues MAASQSSATFWRDLLVLLHRYAGIFIAPFIFVAAFTGLLYVLTPQLEQWTYRDVLVSQATSQPKSLTEQIQAAQSVMSPT AQIMAVRPAATSHDTTRVIYSDPQQQMANRAIFIDPHDLKVKGQLAVYGTSGILPLRTFLDRLHRDLWLGEWGRIYSELA ASWMGLLALSGIYHWFKRRKQLNQPSEHKKLYLIKWHSWLGLALLPLLLFFSITGLTWSNWAGSNILSMRQWLGWQTPSL ITSLSADSISKPDMHQEHHASMIMHMHSMVDAKDFSDALQLARDNGITAAKVQIRPPVAMSQAWVVEEIDRSWPTQVDSI AVDIVQHKVIDHVYFDQFPLAAKLTRWGVDAHMGVLFGWTNQLLLILFAIGLCITIVLAYRIWWQTTDFKKTTIDFSRRA VVMWSNGSLIQRVGLVFILMVTGISLPIFGVSILMALMMVMLGYKKV >Mature_446_residues AASQSSATFWRDLLVLLHRYAGIFIAPFIFVAAFTGLLYVLTPQLEQWTYRDVLVSQATSQPKSLTEQIQAAQSVMSPTA QIMAVRPAATSHDTTRVIYSDPQQQMANRAIFIDPHDLKVKGQLAVYGTSGILPLRTFLDRLHRDLWLGEWGRIYSELAA SWMGLLALSGIYHWFKRRKQLNQPSEHKKLYLIKWHSWLGLALLPLLLFFSITGLTWSNWAGSNILSMRQWLGWQTPSLI TSLSADSISKPDMHQEHHASMIMHMHSMVDAKDFSDALQLARDNGITAAKVQIRPPVAMSQAWVVEEIDRSWPTQVDSIA VDIVQHKVIDHVYFDQFPLAAKLTRWGVDAHMGVLFGWTNQLLLILFAIGLCITIVLAYRIWWQTTDFKKTTIDFSRRAV VMWSNGSLIQRVGLVFILMVTGISLPIFGVSILMALMMVMLGYKKV
Specific function: Unknown
COG id: COG3182
COG function: function code S; Uncharacterized iron-regulated membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50726; Mature: 50595
Theoretical pI: Translated: 9.89; Mature: 9.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAASQSSATFWRDLLVLLHRYAGIFIAPFIFVAAFTGLLYVLTPQLEQWTYRDVLVSQAT CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHC SQPKSLTEQIQAAQSVMSPTAQIMAVRPAATSHDTTRVIYSDPQQQMANRAIFIDPHDLK CCHHHHHHHHHHHHHHHCCHHHEEEECCCCCCCCCEEEEECCHHHHHCCCEEEECCCCCE VKGQLAVYGTSGILPLRTFLDRLHRDLWLGEWGRIYSELAASWMGLLALSGIYHWFKRRK EEEEEEEEECCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QLNQPSEHKKLYLIKWHSWLGLALLPLLLFFSITGLTWSNWAGSNILSMRQWLGWQTPSL HCCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCHHH ITSLSADSISKPDMHQEHHASMIMHMHSMVDAKDFSDALQLARDNGITAAKVQIRPPVAM HHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCHH SQAWVVEEIDRSWPTQVDSIAVDIVQHKVIDHVYFDQFPLAAKLTRWGVDAHMGVLFGWT HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHH NQLLLILFAIGLCITIVLAYRIWWQTTDFKKTTIDFSRRAVVMWSNGSLIQRVGLVFILM HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHEECCCCCEEEEECCCHHHHHHHHHHHHH VTGISLPIFGVSILMALMMVMLGYKKV HHHCCCHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure AASQSSATFWRDLLVLLHRYAGIFIAPFIFVAAFTGLLYVLTPQLEQWTYRDVLVSQAT CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHC SQPKSLTEQIQAAQSVMSPTAQIMAVRPAATSHDTTRVIYSDPQQQMANRAIFIDPHDLK CCHHHHHHHHHHHHHHHCCHHHEEEECCCCCCCCCEEEEECCHHHHHCCCEEEECCCCCE VKGQLAVYGTSGILPLRTFLDRLHRDLWLGEWGRIYSELAASWMGLLALSGIYHWFKRRK EEEEEEEEECCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QLNQPSEHKKLYLIKWHSWLGLALLPLLLFFSITGLTWSNWAGSNILSMRQWLGWQTPSL HCCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCHHH ITSLSADSISKPDMHQEHHASMIMHMHSMVDAKDFSDALQLARDNGITAAKVQIRPPVAM HHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCHH SQAWVVEEIDRSWPTQVDSIAVDIVQHKVIDHVYFDQFPLAAKLTRWGVDAHMGVLFGWT HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHH NQLLLILFAIGLCITIVLAYRIWWQTTDFKKTTIDFSRRAVVMWSNGSLIQRVGLVFILM HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHEECCCCCEEEEECCCHHHHHHHHHHHHH VTGISLPIFGVSILMALMMVMLGYKKV HHHCCCHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA