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The map label for this gene is yfcH [H]

Identifier: 50084129

GI number: 50084129

Start: 904315

End: 905226

Strand: Direct

Name: yfcH [H]

Synonym: ACIAD0921

Alternate gene names: 50084129

Gene position: 904315-905226 (Clockwise)

Preceding gene: 50084128

Following gene: 50084132

Centisome position: 25.13

GC content: 43.75

Gene sequence:

>912_bases
ATGAATCATCATGTCGCAACAATTTTGATTACAGGCGCATCAGGTTTTATTGGTCGTCATGTATTACCGCATTTACTTGA
TGCGAATTATCAGCTTTTTGCTTATACACGGCATATTGCTCAGCGTTATAAGCATCCAAATCTGGTCTGGATTGACGATC
TGGATCAGATCATGCAACCGCTCGACTATGTCATTAATTTGGCGGGAGAAAATATTGGCCAGTCCAGATGGACAGCAGAA
CGCAAGCAAAAATTGATCGATAGTCGAGTCGACACCACGACGCATGTTTATGAATGGTTAATCAGGCAGCAGCAAAAACC
AAGACGTATTATTTCGGCTTCTGCGATTGGTTACTATGGCATAGATGAAACAGAGCAATGGCAACGCGTTTGTGATGAGC
ATTCACCTCCGCAGGCAATTTTTATGTCAGAACTCTGCCAGCAATGGGAGCAGGCGGCATTAAGCTATACGCAGTTTGAC
ACCAGAATTATGCGACTTGGCGTCGTTTTTGCCAGAGACGGTGGGATTTTGCCACAAATGATGCTTCCGATTAAACTGAA
TCTGGTGGGTAAAATTGGTTCTGGGCGCCAAGCTGTGGTGTGGGTGCATATTCAGGATGTGCTGGCTATTCTTGATTTTT
TATTACATACCCAGACCGAGCACATCATCTTTAATGCCGTTGCGCCGACTCAGACCTCGCAAGCCGAATTTGTGAAAATT
GCAGGGCAAGTGATTAAGCGTCGTCCATTTTTGAGCGCGCCTGCTTTTATATTTCAGAAACTTTTGGGAGAACAGTCTCA
ACTGATTTTAAATGGACAGTATGTGCAACCTAAAGCGTTGCTAGACGCAGGTTATCTTTTTCAGTTTGCTCATCTCGATC
AAGCATTACGCCAGATTTATTCTAAATCTTAG

Upstream 100 bases:

>100_bases
GGCGCAACGCATGGCAGACAAAATGTTTCAATAAGCAAACGGCAATATAGATCAGCTTAGTTAGACTTGTTTCAATAATA
GCAATAATGACTTTAAAAAG

Downstream 100 bases:

>100_bases
TGCTATACCATGACAGGCTTACTGAGGCGTTCGGGAGAATAAAGGGCTGGGTTTATGTCTGTGGGTTGTTTGAGCATGAG
CTGACGTAACAGTTGTGCAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 303; Mature: 303

Protein sequence:

>303_residues
MNHHVATILITGASGFIGRHVLPHLLDANYQLFAYTRHIAQRYKHPNLVWIDDLDQIMQPLDYVINLAGENIGQSRWTAE
RKQKLIDSRVDTTTHVYEWLIRQQQKPRRIISASAIGYYGIDETEQWQRVCDEHSPPQAIFMSELCQQWEQAALSYTQFD
TRIMRLGVVFARDGGILPQMMLPIKLNLVGKIGSGRQAVVWVHIQDVLAILDFLLHTQTEHIIFNAVAPTQTSQAEFVKI
AGQVIKRRPFLSAPAFIFQKLLGEQSQLILNGQYVQPKALLDAGYLFQFAHLDQALRQIYSKS

Sequences:

>Translated_303_residues
MNHHVATILITGASGFIGRHVLPHLLDANYQLFAYTRHIAQRYKHPNLVWIDDLDQIMQPLDYVINLAGENIGQSRWTAE
RKQKLIDSRVDTTTHVYEWLIRQQQKPRRIISASAIGYYGIDETEQWQRVCDEHSPPQAIFMSELCQQWEQAALSYTQFD
TRIMRLGVVFARDGGILPQMMLPIKLNLVGKIGSGRQAVVWVHIQDVLAILDFLLHTQTEHIIFNAVAPTQTSQAEFVKI
AGQVIKRRPFLSAPAFIFQKLLGEQSQLILNGQYVQPKALLDAGYLFQFAHLDQALRQIYSKS
>Mature_303_residues
MNHHVATILITGASGFIGRHVLPHLLDANYQLFAYTRHIAQRYKHPNLVWIDDLDQIMQPLDYVINLAGENIGQSRWTAE
RKQKLIDSRVDTTTHVYEWLIRQQQKPRRIISASAIGYYGIDETEQWQRVCDEHSPPQAIFMSELCQQWEQAALSYTQFD
TRIMRLGVVFARDGGILPQMMLPIKLNLVGKIGSGRQAVVWVHIQDVLAILDFLLHTQTEHIIFNAVAPTQTSQAEFVKI
AGQVIKRRPFLSAPAFIFQKLLGEQSQLILNGQYVQPKALLDAGYLFQFAHLDQALRQIYSKS

Specific function: Unknown

COG id: COG1090

COG function: function code R; Predicted nucleoside-diphosphate sugar epimerase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sugar epimerase family. SDR39U1 subfamily [H]

Homologues:

Organism=Homo sapiens, GI116812630, Length=300, Percent_Identity=33.6666666666667, Blast_Score=159, Evalue=3e-39,
Organism=Escherichia coli, GI1788642, Length=299, Percent_Identity=37.7926421404682, Blast_Score=190, Evalue=8e-50,
Organism=Drosophila melanogaster, GI28573846, Length=302, Percent_Identity=28.1456953642384, Blast_Score=142, Evalue=3e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013549
- InterPro:   IPR001509
- InterPro:   IPR016040
- InterPro:   IPR010099 [H]

Pfam domain/function: PF08338 DUF1731; PF01370 Epimerase [H]

EC number: NA

Molecular weight: Translated: 34701; Mature: 34701

Theoretical pI: Translated: 8.62; Mature: 8.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNHHVATILITGASGFIGRHVLPHLLDANYQLFAYTRHIAQRYKHPNLVWIDDLDQIMQP
CCCEEEEEEEECCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCEEEECCHHHHHHH
LDYVINLAGENIGQSRWTAERKQKLIDSRVDTTTHVYEWLIRQQQKPRRIISASAIGYYG
HHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHCCCCCC
IDETEQWQRVCDEHSPPQAIFMSELCQQWEQAALSYTQFDTRIMRLGVVFARDGGILPQM
CCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCHH
MLPIKLNLVGKIGSGRQAVVWVHIQDVLAILDFLLHTQTEHIIFNAVAPTQTSQAEFVKI
HCCEEEEEEEECCCCCEEEEEEEHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHH
AGQVIKRRPFLSAPAFIFQKLLGEQSQLILNGQYVQPKALLDAGYLFQFAHLDQALRQIY
HHHHHHCCCCCCCHHHHHHHHHCCCCEEEECCCEECHHHHHHHHHHHHHHHHHHHHHHHH
SKS
CCC
>Mature Secondary Structure
MNHHVATILITGASGFIGRHVLPHLLDANYQLFAYTRHIAQRYKHPNLVWIDDLDQIMQP
CCCEEEEEEEECCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCEEEECCHHHHHHH
LDYVINLAGENIGQSRWTAERKQKLIDSRVDTTTHVYEWLIRQQQKPRRIISASAIGYYG
HHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHCCCCCC
IDETEQWQRVCDEHSPPQAIFMSELCQQWEQAALSYTQFDTRIMRLGVVFARDGGILPQM
CCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCHH
MLPIKLNLVGKIGSGRQAVVWVHIQDVLAILDFLLHTQTEHIIFNAVAPTQTSQAEFVKI
HCCEEEEEEEECCCCCEEEEEEEHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHH
AGQVIKRRPFLSAPAFIFQKLLGEQSQLILNGQYVQPKALLDAGYLFQFAHLDQALRQIY
HHHHHHCCCCCCCHHHHHHHHHCCCCEEEECCCEECHHHHHHHHHHHHHHHHHHHHHHHH
SKS
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503 [H]