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The map label for this gene is yfcM [H]

Identifier: 50084078

GI number: 50084078

Start: 852416

End: 853078

Strand: Reverse

Name: yfcM [H]

Synonym: ACIAD0866

Alternate gene names: 50084078

Gene position: 853078-852416 (Counterclockwise)

Preceding gene: 50084085

Following gene: 50084077

Centisome position: 23.71

GC content: 43.59

Gene sequence:

>663_bases
ATGCACCTGTTGCAGCCGCAACCTGAAGTAACAACTTCATCACTTGTTAGCACCCATCTAACCTTAGATTCTGCCTTGTC
TATAGACACAGTGCAACTCTCACTATGGCAAAATTTACAAACTGAGCAGGATCAGGTGGACTGGCTTATTTTACACTTTA
ATCACTGGTTTTCCCACCAAAATGTGATTTTAGTGAAAGGTGAGTCAGAACCTGAGTATTTTCCTGCACATCGGCACGCG
CCTGCCCGAATCCAGTTTGCGCATGGTTTTTTTAATAGTGCATTACATGAAATCAGTCACTGGAGCATTGCTGGCTCTAA
AAGAAGATTGCTGGCAGATTTAGGATACTGGTATGCACCTGACGGACGTACCGCAGAACAACAGGCTTTATTTGAACAGG
TTGAGGTCAAACCACAAGCTATCGAATGGATGTTTGCTCAGGCCTTTGGTCGAAAGTTCCGTGTTTCACTCGATAATCTG
ACAGGTGAAGGTGGTGACGGGGCAACGTTTAAAAATAACGTCTTTGCTCAGGTACAAAAATATTTTTCTGGTGAGGCGAA
ACTTCCTCTAGATGCACAACATTTTATTCAATGTATTTGTATGACGACGCGTCACGGTCAGTGGTTAAAAGCAAGTGAAT
TTCAACGCGAAGCGCTGGATTAG

Upstream 100 bases:

>100_bases
ACATAATTAAGGCGGCAATTCTACAAATTCATCAGTACTCTGTCAAAGATTAAGATACAATTTTGTACTAATTTCGACAG
AACTCGGGGTAAATTAAGCA

Downstream 100 bases:

>100_bases
ATTACATAATTTCTACTCGTCTTCACTCATTAGATCAAATACATATGATTAAATGTAAGCATTAACTTTACAACAATAAC
AGAATGAAGGAGTATCCAGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 220; Mature: 220

Protein sequence:

>220_residues
MHLLQPQPEVTTSSLVSTHLTLDSALSIDTVQLSLWQNLQTEQDQVDWLILHFNHWFSHQNVILVKGESEPEYFPAHRHA
PARIQFAHGFFNSALHEISHWSIAGSKRRLLADLGYWYAPDGRTAEQQALFEQVEVKPQAIEWMFAQAFGRKFRVSLDNL
TGEGGDGATFKNNVFAQVQKYFSGEAKLPLDAQHFIQCICMTTRHGQWLKASEFQREALD

Sequences:

>Translated_220_residues
MHLLQPQPEVTTSSLVSTHLTLDSALSIDTVQLSLWQNLQTEQDQVDWLILHFNHWFSHQNVILVKGESEPEYFPAHRHA
PARIQFAHGFFNSALHEISHWSIAGSKRRLLADLGYWYAPDGRTAEQQALFEQVEVKPQAIEWMFAQAFGRKFRVSLDNL
TGEGGDGATFKNNVFAQVQKYFSGEAKLPLDAQHFIQCICMTTRHGQWLKASEFQREALD
>Mature_220_residues
MHLLQPQPEVTTSSLVSTHLTLDSALSIDTVQLSLWQNLQTEQDQVDWLILHFNHWFSHQNVILVKGESEPEYFPAHRHA
PARIQFAHGFFNSALHEISHWSIAGSKRRLLADLGYWYAPDGRTAEQQALFEQVEVKPQAIEWMFAQAFGRKFRVSLDNL
TGEGGDGATFKNNVFAQVQKYFSGEAKLPLDAQHFIQCICMTTRHGQWLKASEFQREALD

Specific function: Unknown

COG id: COG3101

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_1563 [H]

Homologues:

Organism=Escherichia coli, GI1788666, Length=169, Percent_Identity=47.9289940828402, Blast_Score=144, Evalue=5e-36,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007411 [H]

Pfam domain/function: PF04315 DUF462 [H]

EC number: NA

Molecular weight: Translated: 25192; Mature: 25192

Theoretical pI: Translated: 6.37; Mature: 6.37

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHLLQPQPEVTTSSLVSTHLTLDSALSIDTVQLSLWQNLQTEQDQVDWLILHFNHWFSHQ
CCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCEEEEEEEHHCCCC
NVILVKGESEPEYFPAHRHAPARIQFAHGFFNSALHEISHWSIAGSKRRLLADLGYWYAP
CEEEEECCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCEECC
DGRTAEQQALFEQVEVKPQAIEWMFAQAFGRKFRVSLDNLTGEGGDGATFKNNVFAQVQK
CCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCHHHHHHHHHH
YFSGEAKLPLDAQHFIQCICMTTRHGQWLKASEFQREALD
HHCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHCC
>Mature Secondary Structure
MHLLQPQPEVTTSSLVSTHLTLDSALSIDTVQLSLWQNLQTEQDQVDWLILHFNHWFSHQ
CCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCEEEEEEEHHCCCC
NVILVKGESEPEYFPAHRHAPARIQFAHGFFNSALHEISHWSIAGSKRRLLADLGYWYAP
CEEEEECCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCEECC
DGRTAEQQALFEQVEVKPQAIEWMFAQAFGRKFRVSLDNLTGEGGDGATFKNNVFAQVQK
CCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCHHHHHHHHHH
YFSGEAKLPLDAQHFIQCICMTTRHGQWLKASEFQREALD
HHCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503 [H]