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The map label for this gene is ylbK [H]

Identifier: 50084020

GI number: 50084020

Start: 799476

End: 800426

Strand: Direct

Name: ylbK [H]

Synonym: ACIAD0806

Alternate gene names: 50084020

Gene position: 799476-800426 (Clockwise)

Preceding gene: 50084019

Following gene: 50084023

Centisome position: 22.22

GC content: 43.22

Gene sequence:

>951_bases
ATGAAATGTCTGTATCTGATGTTGCTGACTATATGTATGGGACTGGCAGGCTGTCAGCATGTGTCGCCACATCTTCAGCA
ACCAGCACCACAGCCTATGATGGATGCATATAGTGAACCCGTGCCCGCATCATTTTCAAGTATCAAACAGCAGCGTCCCG
TGATTGCGTTGGTGCTTGGCAGTGGGGGTGCGCGTGGTTATGCGCATATTGGGGTCATACAGGTTCTGGAACAAAATGGT
ATACGTCCAGATTTTATTGTAGGTACCAGTGCAGGCAGTATTGTAGGGTCAATCTACGCGAGTGGTAAAAATGCCTCAGA
ACTGCGTGATATTGCTTTAAATATGAAAGTGGGCGACGTACGTGAGATTACCCTGGATAAAAAAGGCTTTTTCGATGGGA
AAAAAGTTGAAGACTATGTCAACCAGCAAGTCAATGATACGCCACTTGAAAAAATGAAGATCCCAATGTACGTTGTAGCA
ACCGAACTCAAAAATGGTACAGAAACTATATTTAATAAAGGCAATACAGGGCAAGCGGTTCGGGCTTCTATTTCAATACC
GAGTATGTTTGTACCGACCAAAATTCAGGATAAAGAATATGTGGATGGAGGGTTAGTGAGCCCCGTTCCTGTTGAAGTCG
CCAAAAAATTGGGTGCAGATATTATTATTGCCGTGGATATACTTGCCCAGCCTGTACATACCGAAACCACCAATATGTGG
GGGCTATTTAACCAAAATATTAATATTATGCAAAACAGACTGGCACATGAAGAATTAAAGCATGCAGATATTGTGATTCA
GCCAGAATTATATGAAAAAGCCCATATATTTGATGTCAAAGAGCGTGAAGCGACTATGCAGGCAGGTGCGCGGGCAGCCG
AGAAAAAACTTAATGATATTCAGACAGCACTTGAATTACGTCAGACCGAACTGCAAGCACAACAGCGATAA

Upstream 100 bases:

>100_bases
TTTTTTATGACAATTTAAATAATTTCGATACAGCTTTTCACACAGCATCAGACTAAACTTTGCAAACACAAAAAGAACAG
GTTAAAGGTTTTTTATTGCA

Downstream 100 bases:

>100_bases
AGAGTTATAGTAATGATGTAGAGTAATTAGAGGAAAATCAAAAACGTTTCCATATTTGATTTTCCTGATTTAGTGCCAAA
GTAAAAGAAAATCCCGAATC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 316; Mature: 316

Protein sequence:

>316_residues
MKCLYLMLLTICMGLAGCQHVSPHLQQPAPQPMMDAYSEPVPASFSSIKQQRPVIALVLGSGGARGYAHIGVIQVLEQNG
IRPDFIVGTSAGSIVGSIYASGKNASELRDIALNMKVGDVREITLDKKGFFDGKKVEDYVNQQVNDTPLEKMKIPMYVVA
TELKNGTETIFNKGNTGQAVRASISIPSMFVPTKIQDKEYVDGGLVSPVPVEVAKKLGADIIIAVDILAQPVHTETTNMW
GLFNQNINIMQNRLAHEELKHADIVIQPELYEKAHIFDVKEREATMQAGARAAEKKLNDIQTALELRQTELQAQQR

Sequences:

>Translated_316_residues
MKCLYLMLLTICMGLAGCQHVSPHLQQPAPQPMMDAYSEPVPASFSSIKQQRPVIALVLGSGGARGYAHIGVIQVLEQNG
IRPDFIVGTSAGSIVGSIYASGKNASELRDIALNMKVGDVREITLDKKGFFDGKKVEDYVNQQVNDTPLEKMKIPMYVVA
TELKNGTETIFNKGNTGQAVRASISIPSMFVPTKIQDKEYVDGGLVSPVPVEVAKKLGADIIIAVDILAQPVHTETTNMW
GLFNQNINIMQNRLAHEELKHADIVIQPELYEKAHIFDVKEREATMQAGARAAEKKLNDIQTALELRQTELQAQQR
>Mature_316_residues
MKCLYLMLLTICMGLAGCQHVSPHLQQPAPQPMMDAYSEPVPASFSSIKQQRPVIALVLGSGGARGYAHIGVIQVLEQNG
IRPDFIVGTSAGSIVGSIYASGKNASELRDIALNMKVGDVREITLDKKGFFDGKKVEDYVNQQVNDTPLEKMKIPMYVVA
TELKNGTETIFNKGNTGQAVRASISIPSMFVPTKIQDKEYVDGGLVSPVPVEVAKKLGADIIIAVDILAQPVHTETTNMW
GLFNQNINIMQNRLAHEELKHADIVIQPELYEKAHIFDVKEREATMQAGARAAEKKLNDIQTALELRQTELQAQQR

Specific function: Unknown

COG id: COG1752

COG function: function code R; Predicted esterase of the alpha-beta hydrolase superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 patatin domain [H]

Homologues:

Organism=Homo sapiens, GI260656041, Length=215, Percent_Identity=29.3023255813954, Blast_Score=109, Evalue=3e-24,
Organism=Homo sapiens, GI116256487, Length=215, Percent_Identity=29.3023255813954, Blast_Score=109, Evalue=3e-24,
Organism=Homo sapiens, GI260656043, Length=215, Percent_Identity=29.3023255813954, Blast_Score=109, Evalue=3e-24,
Organism=Homo sapiens, GI260656039, Length=215, Percent_Identity=29.3023255813954, Blast_Score=109, Evalue=4e-24,
Organism=Homo sapiens, GI260656037, Length=215, Percent_Identity=29.3023255813954, Blast_Score=109, Evalue=4e-24,
Organism=Homo sapiens, GI148727335, Length=215, Percent_Identity=29.7674418604651, Blast_Score=103, Evalue=2e-22,
Organism=Homo sapiens, GI148727290, Length=215, Percent_Identity=29.7674418604651, Blast_Score=103, Evalue=3e-22,
Organism=Escherichia coli, GI226510936, Length=290, Percent_Identity=30.3448275862069, Blast_Score=129, Evalue=2e-31,
Organism=Caenorhabditis elegans, GI193204778, Length=264, Percent_Identity=25, Blast_Score=82, Evalue=4e-16,
Organism=Saccharomyces cerevisiae, GI6323581, Length=203, Percent_Identity=29.5566502463054, Blast_Score=91, Evalue=3e-19,
Organism=Drosophila melanogaster, GI28571388, Length=243, Percent_Identity=28.3950617283951, Blast_Score=82, Evalue=6e-16,
Organism=Drosophila melanogaster, GI281376913, Length=242, Percent_Identity=28.5123966942149, Blast_Score=81, Evalue=1e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016035
- InterPro:   IPR001423
- InterPro:   IPR002641 [H]

Pfam domain/function: PF01734 Patatin [H]

EC number: NA

Molecular weight: Translated: 34694; Mature: 34694

Theoretical pI: Translated: 6.63; Mature: 6.63

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKCLYLMLLTICMGLAGCQHVSPHLQQPAPQPMMDAYSEPVPASFSSIKQQRPVIALVLG
CHHHHHHHHHHHHHHHCCHHCCHHHCCCCCCHHHHHCCCCCCCHHHHHHHCCCEEEEEEC
SGGARGYAHIGVIQVLEQNGIRPDFIVGTSAGSIVGSIYASGKNASELRDIALNMKVGDV
CCCCCCHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHCCCCCHHHHHHHHCCCCCCCE
REITLDKKGFFDGKKVEDYVNQQVNDTPLEKMKIPMYVVATELKNGTETIFNKGNTGQAV
EEEEECCCCCCCCCHHHHHHCCCCCCCCHHHHCCCEEEEEEHHCCCHHHHHCCCCCCCEE
RASISIPSMFVPTKIQDKEYVDGGLVSPVPVEVAKKLGADIIIAVDILAQPVHTETTNMW
EEEECCCCEECCCCCCCCHHCCCCCCCCCCHHHHHHCCCCEEEEEEHHCCCCCCCCCCEE
GLFNQNINIMQNRLAHEELKHADIVIQPELYEKAHIFDVKEREATMQAGARAAEKKLNDI
EEECCCHHHHHHHHHHHHHHHCCEEECCHHHCHHHEECCHHHHHHHHHHHHHHHHHHHHH
QTALELRQTELQAQQR
HHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKCLYLMLLTICMGLAGCQHVSPHLQQPAPQPMMDAYSEPVPASFSSIKQQRPVIALVLG
CHHHHHHHHHHHHHHHCCHHCCHHHCCCCCCHHHHHCCCCCCCHHHHHHHCCCEEEEEEC
SGGARGYAHIGVIQVLEQNGIRPDFIVGTSAGSIVGSIYASGKNASELRDIALNMKVGDV
CCCCCCHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHCCCCCHHHHHHHHCCCCCCCE
REITLDKKGFFDGKKVEDYVNQQVNDTPLEKMKIPMYVVATELKNGTETIFNKGNTGQAV
EEEEECCCCCCCCCHHHHHHCCCCCCCCHHHHCCCEEEEEEHHCCCHHHHHCCCCCCCEE
RASISIPSMFVPTKIQDKEYVDGGLVSPVPVEVAKKLGADIIIAVDILAQPVHTETTNMW
EEEECCCCEECCCCCCCCHHCCCCCCCCCCHHHHHHCCCCEEEEEEHHCCCCCCCCCCEE
GLFNQNINIMQNRLAHEELKHADIVIQPELYEKAHIFDVKEREATMQAGARAAEKKLNDI
EEECCCHHHHHHHHHHHHHHHCCEEECCHHHCHHHEECCHHHHHHHHHHHHHHHHHHHHH
QTALELRQTELQAQQR
HHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]