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The map label for this gene is dcyD [C]

Identifier: 50083970

GI number: 50083970

Start: 738578

End: 739462

Strand: Reverse

Name: dcyD [C]

Synonym: ACIAD0753

Alternate gene names: 50083970

Gene position: 739462-738578 (Counterclockwise)

Preceding gene: 50083971

Following gene: 50083969

Centisome position: 20.55

GC content: 41.47

Gene sequence:

>885_bases
ATGTTTGACTCTATCGCCCAAGATATTCCATATCACACATTAATCGATGGCTCACCTGTTCGTCTTGATCTCAAGCGACT
TGATCTTATCCATCCACACATTTCAGGCAACAAGTTTTATAAACTTAAATACAATCTTATTGAAGCAAAAAAGCGCGGTT
GTGATCGTATTTTGACTTTTGGAGGTGCCTTTTCCAATCATATCGCAGCCAGTGCCTATGCCGCACATCATTTTGATTTT
AAAAGTATCGGTATTATTCGTGGTCAAGAGCTGGCGTATCGTTCTCTCAATGCAACATTAAAAACTGCACAGCACTATGG
CATGCAACTTGAGTTTATGTCACGTGAGCAATATCGCCAAAAAGATCAGTCAGAATTTTTACATACGCTTCAAAGTCAAT
ACCCATCTGCCTTTATCATTCCAGAAGGTGGAACGAATGCACTTGCCATACAAGGCAGCAAAGAAATCTTGAGTGATACA
GATCGACTCAATTATGATGTCATCTGCTGTGCGGTTGGTACTGGTGGTACACTGGCTGGACTGATTGAAGCCAGCCATCA
TGGGCAATATGTTATAGGTTTCTCCGCACTCAAAGGAGACTTTCTTCACAATGATGTCCAGCGCCATACCAATAAAACCA
ACTGGCATATTCTGGATGATTATTGCTTTGGGGGATACGCAAAAACATCTTCTGAACTGTTCGACTTTATAGCTGGGTTT
GAACAAAAATATCAGATTCCACTCGAACAGGTATATACCGCCAAAATGCTATATGGACTGCTCGACCTGATTCAGAAAAA
TGATTTTGATCAAGGTACACGCATCCTTGCTCTGCATACAGGCGGTTTACAAGGACGTCGCCATGACATTGGCGTTACAG
AATAA

Upstream 100 bases:

>100_bases
TTATGCTTATGGGGATACCATTGAAGATCAAGCGATGTTATCACTGGCAACGCACGGCTTTTATCGTTGGCAACCCATCA
ATCCTAGATAACCCATCACT

Downstream 100 bases:

>100_bases
TCATCTAGTTCTGACATCCTTGATAGAATCTTTTATAATCGCCCCCTTTCTTCTGGCAAGGTAATTTCAAATGTCGTTTC
AGTATGATGTGATCGTTCTC

Product: D-cysteine desulfhydrase (DcyD)

Products: NA

Alternate protein names: ACC deaminase [H]

Number of amino acids: Translated: 294; Mature: 294

Protein sequence:

>294_residues
MFDSIAQDIPYHTLIDGSPVRLDLKRLDLIHPHISGNKFYKLKYNLIEAKKRGCDRILTFGGAFSNHIAASAYAAHHFDF
KSIGIIRGQELAYRSLNATLKTAQHYGMQLEFMSREQYRQKDQSEFLHTLQSQYPSAFIIPEGGTNALAIQGSKEILSDT
DRLNYDVICCAVGTGGTLAGLIEASHHGQYVIGFSALKGDFLHNDVQRHTNKTNWHILDDYCFGGYAKTSSELFDFIAGF
EQKYQIPLEQVYTAKMLYGLLDLIQKNDFDQGTRILALHTGGLQGRRHDIGVTE

Sequences:

>Translated_294_residues
MFDSIAQDIPYHTLIDGSPVRLDLKRLDLIHPHISGNKFYKLKYNLIEAKKRGCDRILTFGGAFSNHIAASAYAAHHFDF
KSIGIIRGQELAYRSLNATLKTAQHYGMQLEFMSREQYRQKDQSEFLHTLQSQYPSAFIIPEGGTNALAIQGSKEILSDT
DRLNYDVICCAVGTGGTLAGLIEASHHGQYVIGFSALKGDFLHNDVQRHTNKTNWHILDDYCFGGYAKTSSELFDFIAGF
EQKYQIPLEQVYTAKMLYGLLDLIQKNDFDQGTRILALHTGGLQGRRHDIGVTE
>Mature_294_residues
MFDSIAQDIPYHTLIDGSPVRLDLKRLDLIHPHISGNKFYKLKYNLIEAKKRGCDRILTFGGAFSNHIAASAYAAHHFDF
KSIGIIRGQELAYRSLNATLKTAQHYGMQLEFMSREQYRQKDQSEFLHTLQSQYPSAFIIPEGGTNALAIQGSKEILSDT
DRLNYDVICCAVGTGGTLAGLIEASHHGQYVIGFSALKGDFLHNDVQRHTNKTNWHILDDYCFGGYAKTSSELFDFIAGF
EQKYQIPLEQVYTAKMLYGLLDLIQKNDFDQGTRILALHTGGLQGRRHDIGVTE

Specific function: Catalyzes The Alpha,Beta-Elimination Reaction Of D-Cysteine And Of Several D-Cysteine Derivatives. It Could Be A Defense Mechanism Against D-Cysteine. Can Also Catalyze The Degradation Of 3-Chloro-D-Alanine. [C]

COG id: COG2515

COG function: function code E; 1-aminocyclopropane-1-carboxylate deaminase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ACC deaminase/D-cysteine desulfhydrase family [H]

Homologues:

Organism=Escherichia coli, GI87082000, Length=290, Percent_Identity=25.1724137931034, Blast_Score=76, Evalue=3e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005966
- InterPro:   IPR001926 [H]

Pfam domain/function: PF00291 PALP [H]

EC number: =3.5.99.7 [H]

Molecular weight: Translated: 33084; Mature: 33084

Theoretical pI: Translated: 7.07; Mature: 7.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFDSIAQDIPYHTLIDGSPVRLDLKRLDLIHPHISGNKFYKLKYNLIEAKKRGCDRILTF
CCCCHHHHCCCEEEECCCCCEEEHHHHHEECCCCCCCEEEEEEEHHHHHHHCCHHHEEEC
GGAFSNHIAASAYAAHHFDFKSIGIIRGQELAYRSLNATLKTAQHYGMQLEFMSREQYRQ
CCCHHHHHHHHHHHHHCCCCHHCCEEECCHHHHHHHHHHHHHHHHCCCEEEECCHHHHHH
KDQSEFLHTLQSQYPSAFIIPEGGTNALAIQGSKEILSDTDRLNYDVICCAVGTGGTLAG
HHHHHHHHHHHHHCCCEEEEECCCCCEEEEECCHHHHCCCCCCCEEEEEEEECCCCHHHH
LIEASHHGQYVIGFSALKGDFLHNDVQRHTNKTNWHILDDYCFGGYAKTSSELFDFIAGF
HEECCCCCCEEEEEHHHCCHHHHHHHHHHCCCCCCEEEECCCCCCCCCCHHHHHHHHHCC
EQKYQIPLEQVYTAKMLYGLLDLIQKNDFDQGTRILALHTGGLQGRRHDIGVTE
HHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCCC
>Mature Secondary Structure
MFDSIAQDIPYHTLIDGSPVRLDLKRLDLIHPHISGNKFYKLKYNLIEAKKRGCDRILTF
CCCCHHHHCCCEEEECCCCCEEEHHHHHEECCCCCCCEEEEEEEHHHHHHHCCHHHEEEC
GGAFSNHIAASAYAAHHFDFKSIGIIRGQELAYRSLNATLKTAQHYGMQLEFMSREQYRQ
CCCHHHHHHHHHHHHHCCCCHHCCEEECCHHHHHHHHHHHHHHHHCCCEEEECCHHHHHH
KDQSEFLHTLQSQYPSAFIIPEGGTNALAIQGSKEILSDTDRLNYDVICCAVGTGGTLAG
HHHHHHHHHHHHHCCCEEEEECCCCCEEEEECCHHHHCCCCCCCEEEEEEEECCCCHHHH
LIEASHHGQYVIGFSALKGDFLHNDVQRHTNKTNWHILDDYCFGGYAKTSSELFDFIAGF
HEECCCCCCEEEEEHHHCCHHHHHHHHHHCCCCCCEEEECCCCCCCCCCHHHHHHHHHCC
EQKYQIPLEQVYTAKMLYGLLDLIQKNDFDQGTRILALHTGGLQGRRHDIGVTE
HHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10360571 [H]