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The map label for this gene is ygfZ [C]

Identifier: 50083936

GI number: 50083936

Start: 701141

End: 701863

Strand: Reverse

Name: ygfZ [C]

Synonym: ACIAD0714

Alternate gene names: 50083936

Gene position: 701863-701141 (Counterclockwise)

Preceding gene: 50083944

Following gene: 50083935

Centisome position: 19.5

GC content: 42.74

Gene sequence:

>723_bases
ATGAATGATTTGGCGTTTACTTCATTCACCCTTATTGGTGTCGATGCACAAAAATTCTTGCAAGGACAAGTCCTGCTTCA
TATTGAACGCCTCGCAGAAAATACGACGCGTTATACAGGAATTTGTGATCTTAAAGGACGTATCCACTTTGGTTTATGGA
TCACCAAACTCAATCCTGAAGAATTCCAGATTGTAACCACCCAAGATCAGGCCGAAGATTTTGCCCTACATATTAAAAAA
TATGGCGCATTTTCTAAAATGAAGCTTGAGAAAACGGGAACAGTTTATCCAACAGTTACAGGCATCCAGACTGAATTTTC
AAATAGCGAAACAGATATCAATGCATGGCAACTCCAGGCCATTGAATCTGGTCAGGCATGGATTAGCAAGCTGACCGAAC
ATGAGTTTCAGCCACAAGAATTACGCCTGCATCAGCGTGATGGCGTCGACTATGACAAAGGATGTTATCTGGGACAGGAA
ATTGTCGCTCGTTTATGGTTCAAGGCAAAACCCAAGCACTGGCTACATCTGGTATTAGGCGATGGCGAAGTGCCTGTATC
CGCAACTAAATTGAATAATGATGTTGAAGTGGTTAATAGTATTGCTATAGCGTCAGGTTATAAAGCGTTGGTGATTGCCA
AACCTGCTGCACTTGAGGAATTAAGCCTCACTGTACTTGATTTGCCCGAAGCATTAAGCGCCGATGTGGCTCGTCCTCAA
TAA

Upstream 100 bases:

>100_bases
TCCAGACTTGGATACAGATTGAAGGCAAAGGCTGATTTTTTGAAAGAAATAGCGCAAAATAGTTTGAATAATTCTATACA
CAATTCAGGTTAGACGTTTT

Downstream 100 bases:

>100_bases
CAGATATGATGTATTGAGCTCGAATTAAGCCTTCAAATTTGAAGGCTTTTTTATATCCAGATCATTGAGATATAATCAAA
CAGTTACTAAAAACATTGTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 240; Mature: 240

Protein sequence:

>240_residues
MNDLAFTSFTLIGVDAQKFLQGQVLLHIERLAENTTRYTGICDLKGRIHFGLWITKLNPEEFQIVTTQDQAEDFALHIKK
YGAFSKMKLEKTGTVYPTVTGIQTEFSNSETDINAWQLQAIESGQAWISKLTEHEFQPQELRLHQRDGVDYDKGCYLGQE
IVARLWFKAKPKHWLHLVLGDGEVPVSATKLNNDVEVVNSIAIASGYKALVIAKPAALEELSLTVLDLPEALSADVARPQ

Sequences:

>Translated_240_residues
MNDLAFTSFTLIGVDAQKFLQGQVLLHIERLAENTTRYTGICDLKGRIHFGLWITKLNPEEFQIVTTQDQAEDFALHIKK
YGAFSKMKLEKTGTVYPTVTGIQTEFSNSETDINAWQLQAIESGQAWISKLTEHEFQPQELRLHQRDGVDYDKGCYLGQE
IVARLWFKAKPKHWLHLVLGDGEVPVSATKLNNDVEVVNSIAIASGYKALVIAKPAALEELSLTVLDLPEALSADVARPQ
>Mature_240_residues
MNDLAFTSFTLIGVDAQKFLQGQVLLHIERLAENTTRYTGICDLKGRIHFGLWITKLNPEEFQIVTTQDQAEDFALHIKK
YGAFSKMKLEKTGTVYPTVTGIQTEFSNSETDINAWQLQAIESGQAWISKLTEHEFQPQELRLHQRDGVDYDKGCYLGQE
IVARLWFKAKPKHWLHLVLGDGEVPVSATKLNNDVEVVNSIAIASGYKALVIAKPAALEELSLTVLDLPEALSADVARPQ

Specific function: Unknown

COG id: COG0354

COG function: function code R; Predicted aminomethyltransferase related to GcvT

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ygfZ (UP14) and B.aphidicola (subsp. Acyrthosiphon pisum) BU435 [H]

Homologues:

None

Paralogues:

None

Copy number: 40 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017703
- InterPro:   IPR006222 [H]

Pfam domain/function: PF01571 GCV_T [H]

EC number: NA

Molecular weight: Translated: 26882; Mature: 26882

Theoretical pI: Translated: 5.34; Mature: 5.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNDLAFTSFTLIGVDAQKFLQGQVLLHIERLAENTTRYTGICDLKGRIHFGLWITKLNPE
CCCCEEEEEEEEECCHHHHHCCHHHHHHHHHHCCCCEEEEEEEECCEEEEEEEEEEECCC
EFQIVTTQDQAEDFALHIKKYGAFSKMKLEKTGTVYPTVTGIQTEFSNSETDINAWQLQA
CEEEEECCCCCCHHHHHHHHCCCCCEEEECCCCCCCEEEECEEEECCCCCCCCCEEEEEE
IESGQAWISKLTEHEFQPQELRLHQRDGVDYDKGCYLGQEIVARLWFKAKPKHWLHLVLG
ECCCHHHHHHHHHCCCCHHHHHEECCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEEEE
DGEVPVSATKLNNDVEVVNSIAIASGYKALVIAKPAALEELSLTVLDLPEALSADVARPQ
CCCCCEEHEECCCHHHHHHHHHHHCCCEEEEEECCCCHHHHEEEEEECCHHHHCCCCCCC
>Mature Secondary Structure
MNDLAFTSFTLIGVDAQKFLQGQVLLHIERLAENTTRYTGICDLKGRIHFGLWITKLNPE
CCCCEEEEEEEEECCHHHHHCCHHHHHHHHHHCCCCEEEEEEEECCEEEEEEEEEEECCC
EFQIVTTQDQAEDFALHIKKYGAFSKMKLEKTGTVYPTVTGIQTEFSNSETDINAWQLQA
CEEEEECCCCCCHHHHHHHHCCCCCEEEECCCCCCCEEEECEEEECCCCCCCCCEEEEEE
IESGQAWISKLTEHEFQPQELRLHQRDGVDYDKGCYLGQEIVARLWFKAKPKHWLHLVLG
ECCCHHHHHHHHHCCCCHHHHHEECCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEEEE
DGEVPVSATKLNNDVEVVNSIAIASGYKALVIAKPAALEELSLTVLDLPEALSADVARPQ
CCCCCEEHEECCCHHHHHHHHHHHCCCEEEEEECCCCHHHHEEEEEECCHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]