Click here to switch to the map view.

The map label for this gene is 50083897

Identifier: 50083897

GI number: 50083897

Start: 662264

End: 663454

Strand: Direct

Name: 50083897

Synonym: ACIAD0668

Alternate gene names: NA

Gene position: 662264-663454 (Clockwise)

Preceding gene: 50083896

Following gene: 50083898

Centisome position: 18.4

GC content: 41.73

Gene sequence:

>1191_bases
GTGGTGGATAGAATGAAGAGAGCTCAACGGATGAATAAAACTTTTCTAGCGCTTAGTGTCAACATGCTGATGATTGGTGG
GGTTTATGCTGCTGATGATGTCCAGACATCGACACAGGAGAAATCGCTTGAACAGTCTACACAGTCTTCTGAGACTGCTG
CACAAGGTAGTGTGTTTACCGATACAAGTACGCCGACAGCGGTAGCATCTGATCAAGTAAATACGGCGGCTGCAAGCTCT
CCGAGTTCCGCGGCGGAAGCTTTACAAAAAAAAGAAGGCGATGCGACACAAGAGAGTAATCTTCAAGAAGTTTTTACCTC
AAATGAACGACAATATTCCCTGATTAAAAAAGGTGAAATTTCAAGTTATTATGATATTGATTACACTTATTACCGAGATA
CGCGGCTAGATTTAGCAGTTGAAGATGGAACCATTAATCAGTTACGTGTTGAAGAAGATGCAGCGCATACTTTAACCAAC
ACCTTCACATTGCAATATGGTTTACGTGACAATATTACCTTAAGTACCTCCATTCCATTTGTTGCAAAATACGACAATTT
AAAAGCAGGCTCAGGTGGTGGGGGCACAACGGCTGGTTTAGGTGATATTGCATTTGGAGCACGTTGGGAGCCTTTCCCGT
TACAAACCGGACGTTTACCACTGATTCTGTTTGGTAGCCTTTCAACCAAAACAGGTGATAGCCCATATGAAATTAATCCT
GTAACTGATCTTTCTACAGGTAAAGGGTATTACTCGGCTGGTCTGGGTGCAAGTACACGTAAATACATAGATCCAGTTGT
TCTGTTTGCATCAGTGTCGGCCAATTATGGTTTTAAAGAAACAGGCTTAAATCAAAGACGTGGTACCCGTACTATTACTG
AGTTTGATCCAGGAATAAGTGGCGGATTCGCTGTCGGATTTGCTTACTCGTTTAACTATGATGTCTCATTGACGATGTCA
TATCAGCAAAGTTTTAATCTGGATTCTGAGTTTACCTATTCGTCAGGTGAAAACTACAAACCTGCTGATCAAACCACTTC
CATGTTTACCATTGCCTTGGGGGTTCGTGTATCACCAACAACAATTGTCAATGGAACATTGGGAATTGGCTTAACTGAAG
ATGCACCAGATGTTTCTTTGGGGCTTTCTTTCCCGTTAGATATAGCTGGTTTTGCTAAAAAACTTCGTTAA

Upstream 100 bases:

>100_bases
ACCAGACATGGATAAAAATTCTTATACCTATGGTCAGAATATCGATACGTTTATGCGACTTTATTACAAGCGTAAATAGT
TTAGTCAGAAAAAAAATAAT

Downstream 100 bases:

>100_bases
GGGGAGTCGTCGCTATGCGATATCTCAGACTACGCCCGTTAGCATCTGCAATTGTCTTGACGGGGTGTTCCAATGTTGCA
TTCGCACAGTTGGGACAGAA

Product: signal peptide

Products: NA

Alternate protein names: SH3 Type 3 Domain-Containing Protein; Signal Peptide

Number of amino acids: Translated: 396; Mature: 396

Protein sequence:

>396_residues
MVDRMKRAQRMNKTFLALSVNMLMIGGVYAADDVQTSTQEKSLEQSTQSSETAAQGSVFTDTSTPTAVASDQVNTAAASS
PSSAAEALQKKEGDATQESNLQEVFTSNERQYSLIKKGEISSYYDIDYTYYRDTRLDLAVEDGTINQLRVEEDAAHTLTN
TFTLQYGLRDNITLSTSIPFVAKYDNLKAGSGGGGTTAGLGDIAFGARWEPFPLQTGRLPLILFGSLSTKTGDSPYEINP
VTDLSTGKGYYSAGLGASTRKYIDPVVLFASVSANYGFKETGLNQRRGTRTITEFDPGISGGFAVGFAYSFNYDVSLTMS
YQQSFNLDSEFTYSSGENYKPADQTTSMFTIALGVRVSPTTIVNGTLGIGLTEDAPDVSLGLSFPLDIAGFAKKLR

Sequences:

>Translated_396_residues
MVDRMKRAQRMNKTFLALSVNMLMIGGVYAADDVQTSTQEKSLEQSTQSSETAAQGSVFTDTSTPTAVASDQVNTAAASS
PSSAAEALQKKEGDATQESNLQEVFTSNERQYSLIKKGEISSYYDIDYTYYRDTRLDLAVEDGTINQLRVEEDAAHTLTN
TFTLQYGLRDNITLSTSIPFVAKYDNLKAGSGGGGTTAGLGDIAFGARWEPFPLQTGRLPLILFGSLSTKTGDSPYEINP
VTDLSTGKGYYSAGLGASTRKYIDPVVLFASVSANYGFKETGLNQRRGTRTITEFDPGISGGFAVGFAYSFNYDVSLTMS
YQQSFNLDSEFTYSSGENYKPADQTTSMFTIALGVRVSPTTIVNGTLGIGLTEDAPDVSLGLSFPLDIAGFAKKLR
>Mature_396_residues
MVDRMKRAQRMNKTFLALSVNMLMIGGVYAADDVQTSTQEKSLEQSTQSSETAAQGSVFTDTSTPTAVASDQVNTAAASS
PSSAAEALQKKEGDATQESNLQEVFTSNERQYSLIKKGEISSYYDIDYTYYRDTRLDLAVEDGTINQLRVEEDAAHTLTN
TFTLQYGLRDNITLSTSIPFVAKYDNLKAGSGGGGTTAGLGDIAFGARWEPFPLQTGRLPLILFGSLSTKTGDSPYEINP
VTDLSTGKGYYSAGLGASTRKYIDPVVLFASVSANYGFKETGLNQRRGTRTITEFDPGISGGFAVGFAYSFNYDVSLTMS
YQQSFNLDSEFTYSSGENYKPADQTTSMFTIALGVRVSPTTIVNGTLGIGLTEDAPDVSLGLSFPLDIAGFAKKLR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42669; Mature: 42669

Theoretical pI: Translated: 4.47; Mature: 4.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVDRMKRAQRMNKTFLALSVNMLMIGGVYAADDVQTSTQEKSLEQSTQSSETAAQGSVFT
CCHHHHHHHHHCCEEEEEEEEEEEECCEEECCCCCCHHHHHHHHHHHCCHHHHHCCCEEE
DTSTPTAVASDQVNTAAASSPSSAAEALQKKEGDATQESNLQEVFTSNERQYSLIKKGEI
CCCCCCEEECCCCCHHHCCCCHHHHHHHHHHCCCCCHHCCHHHHHCCCCCEEEEEECCCC
SSYYDIDYTYYRDTRLDLAVEDGTINQLRVEEDAAHTLTNTFTLQYGLRDNITLSTSIPF
CCEEECEEEEEECCEEEEEEECCCCCEEEECCHHHHHEEEEEEEEECCCCCEEEECCCCE
VAKYDNLKAGSGGGGTTAGLGDIAFGARWEPFPLQTGRLPLILFGSLSTKTGDSPYEINP
EEECCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCEEECC
VTDLSTGKGYYSAGLGASTRKYIDPVVLFASVSANYGFKETGLNQRRGTRTITEFDPGIS
CCCCCCCCCEEECCCCCCHHHHHCCEEEEEECCCCCCCHHCCCCCCCCCCEEEECCCCCC
GGFAVGFAYSFNYDVSLTMSYQQSFNLDSEFTYSSGENYKPADQTTSMFTIALGVRVSPT
CCEEEEEEEEECCEEEEEEEHHHCCCCCCCEEECCCCCCCCCCCCCEEEEEEEEEEECCC
TIVNGTLGIGLTEDAPDVSLGLSFPLDIAGFAKKLR
EEECCEEECCCCCCCCCCEEECCCCCCHHHHHHHCC
>Mature Secondary Structure
MVDRMKRAQRMNKTFLALSVNMLMIGGVYAADDVQTSTQEKSLEQSTQSSETAAQGSVFT
CCHHHHHHHHHCCEEEEEEEEEEEECCEEECCCCCCHHHHHHHHHHHCCHHHHHCCCEEE
DTSTPTAVASDQVNTAAASSPSSAAEALQKKEGDATQESNLQEVFTSNERQYSLIKKGEI
CCCCCCEEECCCCCHHHCCCCHHHHHHHHHHCCCCCHHCCHHHHHCCCCCEEEEEECCCC
SSYYDIDYTYYRDTRLDLAVEDGTINQLRVEEDAAHTLTNTFTLQYGLRDNITLSTSIPF
CCEEECEEEEEECCEEEEEEECCCCCEEEECCHHHHHEEEEEEEEECCCCCEEEECCCCE
VAKYDNLKAGSGGGGTTAGLGDIAFGARWEPFPLQTGRLPLILFGSLSTKTGDSPYEINP
EEECCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCEEECC
VTDLSTGKGYYSAGLGASTRKYIDPVVLFASVSANYGFKETGLNQRRGTRTITEFDPGIS
CCCCCCCCCEEECCCCCCHHHHHCCEEEEEECCCCCCCHHCCCCCCCCCCEEEECCCCCC
GGFAVGFAYSFNYDVSLTMSYQQSFNLDSEFTYSSGENYKPADQTTSMFTIALGVRVSPT
CCEEEEEEEEECCEEEEEEEHHHCCCCCCCEEECCCCCCCCCCCCCEEEEEEEEEEECCC
TIVNGTLGIGLTEDAPDVSLGLSFPLDIAGFAKKLR
EEECCEEECCCCCCCCCCEEECCCCCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA