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The map label for this gene is ybdF [H]

Identifier: 50083861

GI number: 50083861

Start: 616954

End: 617400

Strand: Reverse

Name: ybdF [H]

Synonym: ACIAD0628

Alternate gene names: 50083861

Gene position: 617400-616954 (Counterclockwise)

Preceding gene: 50083862

Following gene: 50083858

Centisome position: 17.16

GC content: 31.77

Gene sequence:

>447_bases
ATGAATAAAATACACAAATTTCATAATCGGTTTAAAATTCACCTGATGGAAAATAAAATGAATGCTGAGCAAATACAAAA
ATTGGCTATCCAAACTGCATTAAAGCTACCTGAAACGACAATTACTCAGCCTTTTGGGCCACAGTGCCATGTTTTAAAAG
TTTTTGACAAAATATTTATGTTGACCAGTGAAACGCAAAGTCAAAAATTTATGAATGTTAAAGTTGATCCACATTATTCA
GATGAACTTAAAGAATTATATCCGTCAATAAAGGCCGGCTATCATATGAATAAAAAACACTGGGTTTCTATATTTGAAGA
TTCAAAGATTGACGCTGAACTGATTGAAAGCTTAGTCAAATCTTCGTATCAGTTGGTTGTTAACCGATTAAGTAAAGTAC
AAAAGATGCGCTTAGGCCTACTTACAAATGAATCAAAACATATTTAG

Upstream 100 bases:

>100_bases
AGCAGGCTCACTTATCCCCATTTTCTGTGGATAACACTGTGATTATCCACAGGATAACGTTCTATCTATCTTAGCTCATA
GATATAAAACCCAATCTGGA

Downstream 100 bases:

>100_bases
TTTTTATAATCGAAGGTGGAAAGGATTGCGCAGTCCATTTATACAATAAAAAAGCACCGCCTATAGCGATGCTTAATTAA
GCCAAATAATATCTATACAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 148; Mature: 148

Protein sequence:

>148_residues
MNKIHKFHNRFKIHLMENKMNAEQIQKLAIQTALKLPETTITQPFGPQCHVLKVFDKIFMLTSETQSQKFMNVKVDPHYS
DELKELYPSIKAGYHMNKKHWVSIFEDSKIDAELIESLVKSSYQLVVNRLSKVQKMRLGLLTNESKHI

Sequences:

>Translated_148_residues
MNKIHKFHNRFKIHLMENKMNAEQIQKLAIQTALKLPETTITQPFGPQCHVLKVFDKIFMLTSETQSQKFMNVKVDPHYS
DELKELYPSIKAGYHMNKKHWVSIFEDSKIDAELIESLVKSSYQLVVNRLSKVQKMRLGLLTNESKHI
>Mature_148_residues
MNKIHKFHNRFKIHLMENKMNAEQIQKLAIQTALKLPETTITQPFGPQCHVLKVFDKIFMLTSETQSQKFMNVKVDPHYS
DELKELYPSIKAGYHMNKKHWVSIFEDSKIDAELIESLVKSSYQLVVNRLSKVQKMRLGLLTNESKHI

Specific function: Unknown

COG id: COG2315

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786793, Length=119, Percent_Identity=42.0168067226891, Blast_Score=107, Evalue=2e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007351 [H]

Pfam domain/function: PF04237 DUF419 [H]

EC number: NA

Molecular weight: Translated: 17355; Mature: 17355

Theoretical pI: Translated: 10.09; Mature: 10.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKIHKFHNRFKIHLMENKMNAEQIQKLAIQTALKLPETTITQPFGPQCHVLKVFDKIFM
CCHHHHHHHHEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHH
LTSETQSQKFMNVKVDPHYSDELKELYPSIKAGYHMNKKHWVSIFEDSKIDAELIESLVK
HHCCCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCCCHHHHEEECCCCCCCHHHHHHHHH
SSYQLVVNRLSKVQKMRLGLLTNESKHI
HHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MNKIHKFHNRFKIHLMENKMNAEQIQKLAIQTALKLPETTITQPFGPQCHVLKVFDKIFM
CCHHHHHHHHEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHH
LTSETQSQKFMNVKVDPHYSDELKELYPSIKAGYHMNKKHWVSIFEDSKIDAELIESLVK
HHCCCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCCCHHHHEEECCCCCCCHHHHHHHHH
SSYQLVVNRLSKVQKMRLGLLTNESKHI
HHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]