| Definition | Acinetobacter sp. ADP1 chromosome, complete genome. |
|---|---|
| Accession | NC_005966 |
| Length | 3,598,621 |
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The map label for this gene is bfrD [H]
Identifier: 50083770
GI number: 50083770
Start: 517500
End: 519722
Strand: Reverse
Name: bfrD [H]
Synonym: ACIAD0532
Alternate gene names: 50083770
Gene position: 519722-517500 (Counterclockwise)
Preceding gene: 50083775
Following gene: 50083769
Centisome position: 14.44
GC content: 45.12
Gene sequence:
>2223_bases CTGTTTCTTATTGATATTGAGACTTCTATGGCGTTTATCACCACTCGAAAGAAGATTGTTTCTTCTGCTATTGCCTCCTC CCTTGCCGTCATGTCAACTCCCGTTATTGCGCAAGATGATGTTTCGCACCTTGCAACCATTCGTGCGCAAGCAGAACAAA CAGAAAGCTTAAAAGTTGATACATCTGCCAACAAGAAATATGTCGCACCGTTACTCGACACACCAAAATCGGTCGCGATC GTTTCACAAAAATTACTACAGGACACCGGTGCAACCTCTTTAACGCAAGCCCTGCAAAATGTACCAGGTATTACCTTTGC AGCTGGTGAAGGCGGTACACCGTTTGGCGATACGCCTTATATCCGTGGGTATAGCGCACAGTCTTCCATTTATGTGGATG GCGTAAGAAATGCCACGACACAAAATCGTGATAACTTTGCAGTCGAGCAAATTGAAGTCACCAAAGGCTCAAGCTCTACA CTTTCAGGCGGTGGCGGTGTGGGTGGTAGTATCAATTTGATTACCAAACAGGCACACCAAGGCGATGAATATCAAGGGAC TGTTGCTGGCGGTACAGATAATTATCGTCATATTCAACTGGATGCCAATAAAGACTTTGGCAACGGTGTTGCAGGCCGAG TGGTCGTAATGGGACATCAAAATGAAAAGCCAGGTCAGAGCAATGGTGCCGAATATAATCGTGTCGGTTTAGCCCCAAGT ATTGCGTGGGGACTTGGTACTCCAACACGTGGTTTACTGAGCTATTATTACCTGCAAAGTTATGATGAGCCAGATGCAGG TATTCCATTTCCAACCACAGGCGGCAAGCCGATTTCGGTGAAGCAAGGTACGTATTACGGCTGGAAAAATCGCGATTTTG ATAAACGCGAAAACCACATTGGTACGTTCAAGCTTGAACACGATTTAAGTGACAATCTCACTGTGTCGAATGTAGCTACC TATACCAAATCTAAAACTGACTATATTTATACCAATGCCGATGACTCCAAGGGTAACGTGGCCAATGGCACCGTATGGCG TGGTCACTCTCTAAGCCGTATCTCCAATACCGATGCTTTTTCAGATCAACTGGCACTCACGGGCAAGTTCAATACTGGTA TGCTTAAACATAGTTTTAATACTGGTGTTGAATACAGTGATCAAAGTACTGATTTGGGTCTTTATATCACGCCTGCCACC AGTAGCACCTGCACCAGCTCAAACTACCAATGTACAGACCTTTATAATCCAACTAACCCAGCATATACAGGCACCATTAC ACCTTATGCCAACATGTATACCACACGCAGTAAAACAACCTCACTGTACGCGCTGGATAGCATTGAATTCACACCACAAT GGTTGCTAAATTTAGGTGTACGTTGGGATAAATTCGATACCAGCGTGAAATATCATAAAGCCGCGATGACGTATGCTGGT GTCGCATCTACAGGTGTCGATGTAGACAGTGACAGTGACTTTTTCTCTTACCAAACTGGTCTGACTTTCAAGCCAACAGA AAATGGCAGCATCTATGCAAGCTATGCCACTTCTGCAAACCCAGTGGGAATTGGTCAAGGAGACAGCAGCGAATCCAGTG TGAGTACCTCGATTGCAGATCTTTCACCTGAAAAAGCACGTACTGCCGAATTGGGAACTAAATGGGATTTATTTGATAAG CGTGCCAATCTAACAGCGGCGATTTTCCGCACAGAAAAGCAAAATACCCGTATTCAAGATGCATCGGGTCTGTACTCGAA TGTTGGCGATAGCAAAGTTGATGGGTTTGAGCTGGAGTTAAATGGTCATCTTACCCCAAAGTGGGATATTTCTGCTGGCT ATAGCTATTTAGATAGCGAGCTAAAAAATGGAGGTTACTCACGTGGCGCGGCAGTGCCATCGGGCGGCCCAATTCCGTTC GTAGCCAAAAACAGTGCGACGCTTTGGTCGACTTATAAAGTCATGCCAAAGTTCACCCTCGGTGCTGGCGCGCAGTACAA AGACAAAGTCTTTGTAAACTCAAGTACAACCGCAGAGAAATACTTGCCAGCATATACCATTTATAATGCGATGGCGAAGT ACGATATCAACCCGAATGTGAATCTACAGCTGAACATCAACAACATCTCGGACAAACGTTATTTCACTAGCGCGCATGCG GCACACTATGCTTTTGAAGGTGATGGTCGCAATGCAGTACTCGCGATTAACTTTAAGTACTAA
Upstream 100 bases:
>100_bases AATTTTTAATCTTTTAAAATCCATAATTTCTCTATTTTTTACCAATAAAACCAATCAAGAAAATTTACACATAAAAACAA TAATCATTATTATTCGCATA
Downstream 100 bases:
>100_bases AATATAAAGCCATTATCGTTTTATAGCTTTAATGAAAACCCATATAAAATAGCTTCAATTGTTGAGGCTATTTTTCTATT TTCCAATGTCCTTTTTCATA
Product: ferric siderophore receptor protein
Products: NA
Alternate protein names: Virulence-associated outer membrane protein Vir-90 [H]
Number of amino acids: Translated: 740; Mature: 740
Protein sequence:
>740_residues MFLIDIETSMAFITTRKKIVSSAIASSLAVMSTPVIAQDDVSHLATIRAQAEQTESLKVDTSANKKYVAPLLDTPKSVAI VSQKLLQDTGATSLTQALQNVPGITFAAGEGGTPFGDTPYIRGYSAQSSIYVDGVRNATTQNRDNFAVEQIEVTKGSSST LSGGGGVGGSINLITKQAHQGDEYQGTVAGGTDNYRHIQLDANKDFGNGVAGRVVVMGHQNEKPGQSNGAEYNRVGLAPS IAWGLGTPTRGLLSYYYLQSYDEPDAGIPFPTTGGKPISVKQGTYYGWKNRDFDKRENHIGTFKLEHDLSDNLTVSNVAT YTKSKTDYIYTNADDSKGNVANGTVWRGHSLSRISNTDAFSDQLALTGKFNTGMLKHSFNTGVEYSDQSTDLGLYITPAT SSTCTSSNYQCTDLYNPTNPAYTGTITPYANMYTTRSKTTSLYALDSIEFTPQWLLNLGVRWDKFDTSVKYHKAAMTYAG VASTGVDVDSDSDFFSYQTGLTFKPTENGSIYASYATSANPVGIGQGDSSESSVSTSIADLSPEKARTAELGTKWDLFDK RANLTAAIFRTEKQNTRIQDASGLYSNVGDSKVDGFELELNGHLTPKWDISAGYSYLDSELKNGGYSRGAAVPSGGPIPF VAKNSATLWSTYKVMPKFTLGAGAQYKDKVFVNSSTTAEKYLPAYTIYNAMAKYDINPNVNLQLNINNISDKRYFTSAHA AHYAFEGDGRNAVLAINFKY
Sequences:
>Translated_740_residues MFLIDIETSMAFITTRKKIVSSAIASSLAVMSTPVIAQDDVSHLATIRAQAEQTESLKVDTSANKKYVAPLLDTPKSVAI VSQKLLQDTGATSLTQALQNVPGITFAAGEGGTPFGDTPYIRGYSAQSSIYVDGVRNATTQNRDNFAVEQIEVTKGSSST LSGGGGVGGSINLITKQAHQGDEYQGTVAGGTDNYRHIQLDANKDFGNGVAGRVVVMGHQNEKPGQSNGAEYNRVGLAPS IAWGLGTPTRGLLSYYYLQSYDEPDAGIPFPTTGGKPISVKQGTYYGWKNRDFDKRENHIGTFKLEHDLSDNLTVSNVAT YTKSKTDYIYTNADDSKGNVANGTVWRGHSLSRISNTDAFSDQLALTGKFNTGMLKHSFNTGVEYSDQSTDLGLYITPAT SSTCTSSNYQCTDLYNPTNPAYTGTITPYANMYTTRSKTTSLYALDSIEFTPQWLLNLGVRWDKFDTSVKYHKAAMTYAG VASTGVDVDSDSDFFSYQTGLTFKPTENGSIYASYATSANPVGIGQGDSSESSVSTSIADLSPEKARTAELGTKWDLFDK RANLTAAIFRTEKQNTRIQDASGLYSNVGDSKVDGFELELNGHLTPKWDISAGYSYLDSELKNGGYSRGAAVPSGGPIPF VAKNSATLWSTYKVMPKFTLGAGAQYKDKVFVNSSTTAEKYLPAYTIYNAMAKYDINPNVNLQLNINNISDKRYFTSAHA AHYAFEGDGRNAVLAINFKY >Mature_740_residues MFLIDIETSMAFITTRKKIVSSAIASSLAVMSTPVIAQDDVSHLATIRAQAEQTESLKVDTSANKKYVAPLLDTPKSVAI VSQKLLQDTGATSLTQALQNVPGITFAAGEGGTPFGDTPYIRGYSAQSSIYVDGVRNATTQNRDNFAVEQIEVTKGSSST LSGGGGVGGSINLITKQAHQGDEYQGTVAGGTDNYRHIQLDANKDFGNGVAGRVVVMGHQNEKPGQSNGAEYNRVGLAPS IAWGLGTPTRGLLSYYYLQSYDEPDAGIPFPTTGGKPISVKQGTYYGWKNRDFDKRENHIGTFKLEHDLSDNLTVSNVAT YTKSKTDYIYTNADDSKGNVANGTVWRGHSLSRISNTDAFSDQLALTGKFNTGMLKHSFNTGVEYSDQSTDLGLYITPAT SSTCTSSNYQCTDLYNPTNPAYTGTITPYANMYTTRSKTTSLYALDSIEFTPQWLLNLGVRWDKFDTSVKYHKAAMTYAG VASTGVDVDSDSDFFSYQTGLTFKPTENGSIYASYATSANPVGIGQGDSSESSVSTSIADLSPEKARTAELGTKWDLFDK RANLTAAIFRTEKQNTRIQDASGLYSNVGDSKVDGFELELNGHLTPKWDISAGYSYLDSELKNGGYSRGAAVPSGGPIPF VAKNSATLWSTYKVMPKFTLGAGAQYKDKVFVNSSTTAEKYLPAYTIYNAMAKYDINPNVNLQLNINNISDKRYFTSAHA AHYAFEGDGRNAVLAINFKY
Specific function: Probably involved in iron transport [H]
COG id: COG4774
COG function: function code P; Outer membrane receptor for monomeric catechols
Gene ontology:
Cell location: Cell outer membrane [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tonB-dependent receptor family [H]
Homologues:
Organism=Escherichia coli, GI1787024, Length=722, Percent_Identity=32.1329639889197, Blast_Score=334, Evalue=1e-92, Organism=Escherichia coli, GI1786344, Length=772, Percent_Identity=23.7046632124352, Blast_Score=142, Evalue=8e-35,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012910 - InterPro: IPR000531 - InterPro: IPR010105 [H]
Pfam domain/function: PF07715 Plug; PF00593 TonB_dep_Rec [H]
EC number: NA
Molecular weight: Translated: 79992; Mature: 79992
Theoretical pI: Translated: 6.39; Mature: 6.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFLIDIETSMAFITTRKKIVSSAIASSLAVMSTPVIAQDDVSHLATIRAQAEQTESLKVD CEEEEECCCEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCEEEE TSANKKYVAPLLDTPKSVAIVSQKLLQDTGATSLTQALQNVPGITFAAGEGGTPFGDTPY CCCCCEEEEHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHCCCEEEECCCCCCCCCCCCE IRGYSAQSSIYVDGVRNATTQNRDNFAVEQIEVTKGSSSTLSGGGGVGGSINLITKQAHQ EEEECCCCCEEEECCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCEEEEEEECCCC GDEYQGTVAGGTDNYRHIQLDANKDFGNGVAGRVVVMGHQNEKPGQSNGAEYNRVGLAPS CCCCEEEEECCCCCEEEEEEECCCCCCCCCCEEEEEEECCCCCCCCCCCCCCEEECCCCH IAWGLGTPTRGLLSYYYLQSYDEPDAGIPFPTTGGKPISVKQGTYYGWKNRDFDKRENHI HEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCEECCCCCCCCHHHCCE GTFKLEHDLSDNLTVSNVATYTKSKTDYIYTNADDSKGNVANGTVWRGHSLSRISNTDAF EEEEEECCCCCCEEEEHEEEEECCCCCEEEECCCCCCCCCCCCEEECCCCHHHCCCCCCC SDQLALTGKFNTGMLKHSFNTGVEYSDQSTDLGLYITPATSSTCTSSNYQCTDLYNPTNP CCCEEEEECCCCCEEEECCCCCCEECCCCCCEEEEEECCCCCCCCCCCEEEEECCCCCCC AYTGTITPYANMYTTRSKTTSLYALDSIEFTPQWLLNLGVRWDKFDTSVKYHKAAMTYAG CEEEEECCCCCEEEECCCCEEEEEEECCCCCHHHHHHCCCEEECCCCCCEEHHHHHEECC VASTGVDVDSDSDFFSYQTGLTFKPTENGSIYASYATSANPVGIGQGDSSESSVSTSIAD CHHCCCCCCCCCCEEEEECCCEECCCCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHH LSPEKARTAELGTKWDLFDKRANLTAAIFRTEKQNTRIQDASGLYSNVGDSKVDGFELEL CCCCHHHHHHCCCCCCHHHCCCCEEEEEEEECCCCCEECCCCCHHHCCCCCCCCCEEEEE NGHLTPKWDISAGYSYLDSELKNGGYSRGAAVPSGGPIPFVAKNSATLWSTYKVMPKFTL CCCCCCCEECCCCHHHHHHHHHCCCCCCCCCCCCCCCCCEEECCCCEEEEEEEECEEEEE GAGAQYKDKVFVNSSTTAEKYLPAYTIYNAMAKYDINPNVNLQLNINNISDKRYFTSAHA CCCCCCCCEEEEECCCCHHHHCCHHHHHHHHHEEECCCCEEEEEEECCCCCCEEEECCCC AHYAFEGDGRNAVLAINFKY EEEEEECCCCEEEEEEEECC >Mature Secondary Structure MFLIDIETSMAFITTRKKIVSSAIASSLAVMSTPVIAQDDVSHLATIRAQAEQTESLKVD CEEEEECCCEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCEEEE TSANKKYVAPLLDTPKSVAIVSQKLLQDTGATSLTQALQNVPGITFAAGEGGTPFGDTPY CCCCCEEEEHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHCCCEEEECCCCCCCCCCCCE IRGYSAQSSIYVDGVRNATTQNRDNFAVEQIEVTKGSSSTLSGGGGVGGSINLITKQAHQ EEEECCCCCEEEECCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCEEEEEEECCCC GDEYQGTVAGGTDNYRHIQLDANKDFGNGVAGRVVVMGHQNEKPGQSNGAEYNRVGLAPS CCCCEEEEECCCCCEEEEEEECCCCCCCCCCEEEEEEECCCCCCCCCCCCCCEEECCCCH IAWGLGTPTRGLLSYYYLQSYDEPDAGIPFPTTGGKPISVKQGTYYGWKNRDFDKRENHI HEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCEECCCCCCCCHHHCCE GTFKLEHDLSDNLTVSNVATYTKSKTDYIYTNADDSKGNVANGTVWRGHSLSRISNTDAF EEEEEECCCCCCEEEEHEEEEECCCCCEEEECCCCCCCCCCCCEEECCCCHHHCCCCCCC SDQLALTGKFNTGMLKHSFNTGVEYSDQSTDLGLYITPATSSTCTSSNYQCTDLYNPTNP CCCEEEEECCCCCEEEECCCCCCEECCCCCCEEEEEECCCCCCCCCCCEEEEECCCCCCC AYTGTITPYANMYTTRSKTTSLYALDSIEFTPQWLLNLGVRWDKFDTSVKYHKAAMTYAG CEEEEECCCCCEEEECCCCEEEEEEECCCCCHHHHHHCCCEEECCCCCCEEHHHHHEECC VASTGVDVDSDSDFFSYQTGLTFKPTENGSIYASYATSANPVGIGQGDSSESSVSTSIAD CHHCCCCCCCCCCEEEEECCCEECCCCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHH LSPEKARTAELGTKWDLFDKRANLTAAIFRTEKQNTRIQDASGLYSNVGDSKVDGFELEL CCCCHHHHHHCCCCCCHHHCCCCEEEEEEEECCCCCEECCCCCHHHCCCCCCCCCEEEEE NGHLTPKWDISAGYSYLDSELKNGGYSRGAAVPSGGPIPFVAKNSATLWSTYKVMPKFTL CCCCCCCEECCCCHHHHHHHHHCCCCCCCCCCCCCCCCCEEECCCCEEEEEEEECEEEEE GAGAQYKDKVFVNSSTTAEKYLPAYTIYNAMAKYDINPNVNLQLNINNISDKRYFTSAHA CCCCCCCCEEEEECCCCHHHHCCHHHHHHHHHEEECCCCEEEEEEECCCCCCEEEECCCC AHYAFEGDGRNAVLAINFKY EEEEEECCCCEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 12910271; 10079522 [H]