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The map label for this gene is ybeQ [H]

Identifier: 50083765

GI number: 50083765

Start: 512131

End: 512718

Strand: Reverse

Name: ybeQ [H]

Synonym: ACIAD0527

Alternate gene names: 50083765

Gene position: 512718-512131 (Counterclockwise)

Preceding gene: 50083766

Following gene: 50083764

Centisome position: 14.25

GC content: 44.9

Gene sequence:

>588_bases
ATGAAAAAAGCAGTATTTAGCACACTAGTCATTGGACTTTTAAGCTTTCAAGCCCATGCAGATTATGTGGCACAACCGCA
ATCTATTGCAGCACAAGCAGCACGTTATTCTGTAATGAGTATTCCAGAGCTGACTCAAGCAGCAAAATCTGGTCAAGCTG
GTGCCCAGTTCTATTTGGGTGCACATTATCAGCACGGTAAAAATATTCCCAAAGATGATAAGCAAGCATTTACGTGGTTT
AAGGCTGCAGCAGATCAGGGACTTTCCCCTGCTCAGCTCAATGTGGGCCGTATGTATGCAGATGGCGTCGGTGTTGCTAA
AAATGAAGCAATGGCACGCAAGTACTTTGAAAAAGCGGCAAGTAATGGTGACAATCGTGCCAGCTACAATCTGGCGATGA
TGGAAGAACAGAAGAAAAACTATCAGGGTGCGTACCAATGGTACGAGCTTTCAACCCGTGACGGTATGCTGGACAATAAA
GTCATTAATATGTCGCAAAGCAAAAAAACCGCTTTGGCTGCCAACTTGACCCAAGATCAGATTCGTCAAGCGGTTGATCG
TGCGGATAAATGGATTCAGGCGCAGTAA

Upstream 100 bases:

>100_bases
TTAATCGACTTGCCGTGAATGGGAATCAGCAAGGGAGTCTTCTGAGTAAGCATATCCCGAATTTGTTTGGTGAAGTCGCA
ATATACCGAGTGAGCGCTCT

Downstream 100 bases:

>100_bases
GTTTTTTGAATTTTAAAGCACCTTCGGGTGCTTTTTGTTTTTTAGTTTTTCTCTTTTTACTCGAGTTTTAATTATGTCTG
CACCACATTGGCTCTCTCAA

Product: TPR repeat-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 195; Mature: 195

Protein sequence:

>195_residues
MKKAVFSTLVIGLLSFQAHADYVAQPQSIAAQAARYSVMSIPELTQAAKSGQAGAQFYLGAHYQHGKNIPKDDKQAFTWF
KAAADQGLSPAQLNVGRMYADGVGVAKNEAMARKYFEKAASNGDNRASYNLAMMEEQKKNYQGAYQWYELSTRDGMLDNK
VINMSQSKKTALAANLTQDQIRQAVDRADKWIQAQ

Sequences:

>Translated_195_residues
MKKAVFSTLVIGLLSFQAHADYVAQPQSIAAQAARYSVMSIPELTQAAKSGQAGAQFYLGAHYQHGKNIPKDDKQAFTWF
KAAADQGLSPAQLNVGRMYADGVGVAKNEAMARKYFEKAASNGDNRASYNLAMMEEQKKNYQGAYQWYELSTRDGMLDNK
VINMSQSKKTALAANLTQDQIRQAVDRADKWIQAQ
>Mature_195_residues
MKKAVFSTLVIGLLSFQAHADYVAQPQSIAAQAARYSVMSIPELTQAAKSGQAGAQFYLGAHYQHGKNIPKDDKQAFTWF
KAAADQGLSPAQLNVGRMYADGVGVAKNEAMARKYFEKAASNGDNRASYNLAMMEEQKKNYQGAYQWYELSTRDGMLDNK
VINMSQSKKTALAANLTQDQIRQAVDRADKWIQAQ

Specific function: Unknown

COG id: COG0790

COG function: function code R; FOG: TPR repeat, SEL1 subfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ybeT [H]

Homologues:

Organism=Escherichia coli, GI87081769, Length=106, Percent_Identity=39.622641509434, Blast_Score=66, Evalue=2e-12,
Organism=Drosophila melanogaster, GI21355295, Length=91, Percent_Identity=40.6593406593407, Blast_Score=66, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006597
- InterPro:   IPR011990 [H]

Pfam domain/function: PF08238 Sel1 [H]

EC number: NA

Molecular weight: Translated: 21554; Mature: 21554

Theoretical pI: Translated: 9.83; Mature: 9.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKAVFSTLVIGLLSFQAHADYVAQPQSIAAQAARYSVMSIPELTQAAKSGQAGAQFYLG
CCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCEEEEC
AHYQHGKNIPKDDKQAFTWFKAAADQGLSPAQLNVGRMYADGVGVAKNEAMARKYFEKAA
CCHHCCCCCCCCHHHHHHHHHHHHHCCCCCCHHCCCCEEECCCCCHHHHHHHHHHHHHHH
SNGDNRASYNLAMMEEQKKNYQGAYQWYELSTRDGMLDNKVINMSQSKKTALAANLTQDQ
CCCCCCCHHHHHHHHHHHHCCCCHHHEEEECCCCCCCCCHHCCCCCHHHHHHHHCCCHHH
IRQAVDRADKWIQAQ
HHHHHHHHHHHHCCC
>Mature Secondary Structure
MKKAVFSTLVIGLLSFQAHADYVAQPQSIAAQAARYSVMSIPELTQAAKSGQAGAQFYLG
CCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCEEEEC
AHYQHGKNIPKDDKQAFTWFKAAADQGLSPAQLNVGRMYADGVGVAKNEAMARKYFEKAA
CCHHCCCCCCCCHHHHHHHHHHHHHCCCCCCHHCCCCEEECCCCCHHHHHHHHHHHHHHH
SNGDNRASYNLAMMEEQKKNYQGAYQWYELSTRDGMLDNKVINMSQSKKTALAANLTQDQ
CCCCCCCHHHHHHHHHHHHCCCCHHHEEEECCCCCCCCCHHCCCCCHHHHHHHHCCCHHH
IRQAVDRADKWIQAQ
HHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]