| Definition | Acinetobacter sp. ADP1 chromosome, complete genome. |
|---|---|
| Accession | NC_005966 |
| Length | 3,598,621 |
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The map label for this gene is uup [H]
Identifier: 50083728
GI number: 50083728
Start: 481015
End: 482931
Strand: Reverse
Name: uup [H]
Synonym: ACIAD0487
Alternate gene names: 50083728
Gene position: 482931-481015 (Counterclockwise)
Preceding gene: 50083739
Following gene: 50083727
Centisome position: 13.42
GC content: 44.13
Gene sequence:
>1917_bases TTGGAAAACATTATGGCCTATATTACTTTAAGGGATGTCCAACTGGCATTTGGTGGACCCGCCCTCCTCGATGGCGCGAA CTTTGTACTGGAGCGTGGCGAACGAGTGTGTTTAATCGGCCGTAATGGTGAAGGTAAGTCTACTTTACTTAAGCTGATTG AGGGAAGCTTATTACCCGATCGTGGTGAAGTTTCTATTCAAAATGGGCTGACGGTTTCCATGCTGGCTCAGGATGTTCCA ATGGATTCGGGCAAAGTCGCCGATATCGTTGCAGATGGTGCAGGTGAAGCGGCGATTGTATTAAGAGCTTATCATGAAGC CAGTGATGCTTGTGTACTGGGCGATATGGAAGCGTGTGATCGTATGGGTCACTTACAGCACAAACTAGATCAAGTCGATG GCTGGGCACTCGAAAACAAGGTCAATACCATTTTAGGTAAAATGGGCCTTGATCCTGATGCAGATTTAGCAGATTTATCA GGTGGACGTAAGCGTCGTGTGTTGCTGGCACGTGCCCTGCTCACTCAGCCTGATATCTTACTTTTGGATGAACCAACCAA CCATTTGGATGTCGAAAGTATTGAATGGCTAGAAAAATTTCTACTTGAGCAGAACAATTTAACCTTACTGTTTATTTCGC ATGACCGTTCATTTGTAGATCGTTTGGCAACGCGTATTGTAGAACTGGATCGTGGTATTTTGCGCAGCTATGAAGGTAAC TATTCACGTTATTTAGATTTAAAAGCACAACAGCTTGAGGCCGAAGAAAAGCAAAATGCCCTGTTTGAGAAGAAACTGGC AGAAGAAGAAGCTTGGATCCGTCAAGGCATTAAGGCACGTCGTACCCGCAACGAGGGTCGTGTTCGTGCATTAAAAGACT TACGTGAGGAATCCAAAGCTCGCCGCTTCCAGCAAGGCAAAGTCAATATGGGCGTCCAGGATGCACAGCGTTCAGGTAAA TTGGTTTTTGATATTGAAAATCTTAGCGTGAGTTACGATAGCAACCTCTTGATTCGCGACTTCTCTGCGGTGGTATTACG CGGCGACCGTATTGGCTTAGTCGGTGATAATGGTGTGGGCAAAACCACATTGATCAAAGCGATTTTGGGTGAAATTGAAC ATACAGGTACAGTGAAAACAGGCACCCAGCTTGAAGTGGCTTATTTTGACCAGTTGCGTAATCAGCTTGAGCTTGAAAAA TCAGTGATGGCCAATGTGTCTGAAGGTTCGGACTTTGTTGATGTAAATGGTCAGCGTCGTCATATTTATAGCTATTTACA AGACTTTCTGTTTTCACCTGAACGAGCGCGAACACCTGTTAAAGCACTCTCAGGTGGTGAACGTAATCGCGTATTACTGG CCAAGCTTTTACTCAAACCTTCGAATCTAATCGTGATGGACGAACCCACCAACGATCTGGATATGGTAACTTTAGAATTA CTCGAAGAAATGTTGGCTGAATATAAAGGCACATTGCTGTTGATCAGCCATGACCGCGCATTTATGGACAACGTAGTGAC ATCGACGTGGGTATTCGATGGCAAGGGTAGTATTGAAGAATACGTCGGTGGTTATCAAGACTATCTGTTACAGCGTCCGA ATCAAACAGTAGTCGATCAAAAATCTGAAGTAAAAAAAGCTCAAGCCAAAGCTGAAGCAGCAAATACACCTGCTCCTGCT AAAAAGGTGAAGCTAAGTTTTAAAGATCAACGTGAACTTGAACAGCTTCCAGTCGAAATTGAGAAATTAGAAGCCGAGCA AAGTACATTATCGGATGAACTTGCCGACGGTTCATGGTTTCTCAAGGATGCTACTGCTGCGACCCAAGCCAGTCAACGTT TGGCAGAAATTGAAGAAGCACTACTTGAAAAATTAGAGCGTTGGGATGAACTTGAACAAATGAGTAAAGGAAATTAA
Upstream 100 bases:
>100_bases AAATGCAATTCGGACTTGCAAATCTTCAATGGGTGCGGAAAATGACGCATGATCATCGTAATCTGTTGGTTTAGTCATTT AACTCTCCTCATTTGGGATT
Downstream 100 bases:
>100_bases TTTGCGTTCTTCCCTACAGTTTAAATAACGAAAAAGCCCCTGAAATTAAGGGGCTTTTTTCAGAATATATAAATTTTAAG GCTCAAACTCTGTAAAAAAA
Product: ABC transporter ATP-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 638; Mature: 638
Protein sequence:
>638_residues MENIMAYITLRDVQLAFGGPALLDGANFVLERGERVCLIGRNGEGKSTLLKLIEGSLLPDRGEVSIQNGLTVSMLAQDVP MDSGKVADIVADGAGEAAIVLRAYHEASDACVLGDMEACDRMGHLQHKLDQVDGWALENKVNTILGKMGLDPDADLADLS GGRKRRVLLARALLTQPDILLLDEPTNHLDVESIEWLEKFLLEQNNLTLLFISHDRSFVDRLATRIVELDRGILRSYEGN YSRYLDLKAQQLEAEEKQNALFEKKLAEEEAWIRQGIKARRTRNEGRVRALKDLREESKARRFQQGKVNMGVQDAQRSGK LVFDIENLSVSYDSNLLIRDFSAVVLRGDRIGLVGDNGVGKTTLIKAILGEIEHTGTVKTGTQLEVAYFDQLRNQLELEK SVMANVSEGSDFVDVNGQRRHIYSYLQDFLFSPERARTPVKALSGGERNRVLLAKLLLKPSNLIVMDEPTNDLDMVTLEL LEEMLAEYKGTLLLISHDRAFMDNVVTSTWVFDGKGSIEEYVGGYQDYLLQRPNQTVVDQKSEVKKAQAKAEAANTPAPA KKVKLSFKDQRELEQLPVEIEKLEAEQSTLSDELADGSWFLKDATAATQASQRLAEIEEALLEKLERWDELEQMSKGN
Sequences:
>Translated_638_residues MENIMAYITLRDVQLAFGGPALLDGANFVLERGERVCLIGRNGEGKSTLLKLIEGSLLPDRGEVSIQNGLTVSMLAQDVP MDSGKVADIVADGAGEAAIVLRAYHEASDACVLGDMEACDRMGHLQHKLDQVDGWALENKVNTILGKMGLDPDADLADLS GGRKRRVLLARALLTQPDILLLDEPTNHLDVESIEWLEKFLLEQNNLTLLFISHDRSFVDRLATRIVELDRGILRSYEGN YSRYLDLKAQQLEAEEKQNALFEKKLAEEEAWIRQGIKARRTRNEGRVRALKDLREESKARRFQQGKVNMGVQDAQRSGK LVFDIENLSVSYDSNLLIRDFSAVVLRGDRIGLVGDNGVGKTTLIKAILGEIEHTGTVKTGTQLEVAYFDQLRNQLELEK SVMANVSEGSDFVDVNGQRRHIYSYLQDFLFSPERARTPVKALSGGERNRVLLAKLLLKPSNLIVMDEPTNDLDMVTLEL LEEMLAEYKGTLLLISHDRAFMDNVVTSTWVFDGKGSIEEYVGGYQDYLLQRPNQTVVDQKSEVKKAQAKAEAANTPAPA KKVKLSFKDQRELEQLPVEIEKLEAEQSTLSDELADGSWFLKDATAATQASQRLAEIEEALLEKLERWDELEQMSKGN >Mature_638_residues MENIMAYITLRDVQLAFGGPALLDGANFVLERGERVCLIGRNGEGKSTLLKLIEGSLLPDRGEVSIQNGLTVSMLAQDVP MDSGKVADIVADGAGEAAIVLRAYHEASDACVLGDMEACDRMGHLQHKLDQVDGWALENKVNTILGKMGLDPDADLADLS GGRKRRVLLARALLTQPDILLLDEPTNHLDVESIEWLEKFLLEQNNLTLLFISHDRSFVDRLATRIVELDRGILRSYEGN YSRYLDLKAQQLEAEEKQNALFEKKLAEEEAWIRQGIKARRTRNEGRVRALKDLREESKARRFQQGKVNMGVQDAQRSGK LVFDIENLSVSYDSNLLIRDFSAVVLRGDRIGLVGDNGVGKTTLIKAILGEIEHTGTVKTGTQLEVAYFDQLRNQLELEK SVMANVSEGSDFVDVNGQRRHIYSYLQDFLFSPERARTPVKALSGGERNRVLLAKLLLKPSNLIVMDEPTNDLDMVTLEL LEEMLAEYKGTLLLISHDRAFMDNVVTSTWVFDGKGSIEEYVGGYQDYLLQRPNQTVVDQKSEVKKAQAKAEAANTPAPA KKVKLSFKDQRELEQLPVEIEKLEAEQSTLSDELADGSWFLKDATAATQASQRLAEIEEALLEKLERWDELEQMSKGN
Specific function: Unknown
COG id: COG0488
COG function: function code R; ATPase components of ABC transporters with duplicated ATPase domains
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 ABC transporter domains [H]
Homologues:
Organism=Homo sapiens, GI148612853, Length=548, Percent_Identity=29.5620437956204, Blast_Score=211, Evalue=2e-54, Organism=Homo sapiens, GI10947137, Length=565, Percent_Identity=28.141592920354, Blast_Score=189, Evalue=1e-47, Organism=Homo sapiens, GI27881506, Length=565, Percent_Identity=28.141592920354, Blast_Score=188, Evalue=1e-47, Organism=Homo sapiens, GI10947135, Length=537, Percent_Identity=29.0502793296089, Blast_Score=181, Evalue=2e-45, Organism=Homo sapiens, GI69354671, Length=537, Percent_Identity=29.0502793296089, Blast_Score=181, Evalue=3e-45, Organism=Homo sapiens, GI9961252, Length=310, Percent_Identity=28.3870967741935, Blast_Score=76, Evalue=1e-13, Organism=Homo sapiens, GI4505771, Length=311, Percent_Identity=28.2958199356913, Blast_Score=75, Evalue=2e-13, Organism=Homo sapiens, GI9961250, Length=311, Percent_Identity=28.2958199356913, Blast_Score=75, Evalue=2e-13, Organism=Homo sapiens, GI42741659, Length=279, Percent_Identity=28.3154121863799, Blast_Score=72, Evalue=2e-12, Organism=Homo sapiens, GI148612844, Length=227, Percent_Identity=28.6343612334802, Blast_Score=68, Evalue=2e-11, Organism=Homo sapiens, GI255708477, Length=227, Percent_Identity=29.0748898678414, Blast_Score=67, Evalue=4e-11, Organism=Homo sapiens, GI90421313, Length=185, Percent_Identity=32.4324324324324, Blast_Score=67, Evalue=4e-11, Organism=Escherichia coli, GI1787182, Length=637, Percent_Identity=50.392464678179, Blast_Score=578, Evalue=1e-166, Organism=Escherichia coli, GI2367384, Length=504, Percent_Identity=36.1111111111111, Blast_Score=291, Evalue=7e-80, Organism=Escherichia coli, GI1787041, Length=533, Percent_Identity=32.6454033771107, Blast_Score=260, Evalue=2e-70, Organism=Escherichia coli, GI1789751, Length=648, Percent_Identity=28.3950617283951, Blast_Score=243, Evalue=3e-65, Organism=Escherichia coli, GI1788210, Length=511, Percent_Identity=23.2876712328767, Blast_Score=87, Evalue=3e-18, Organism=Escherichia coli, GI145693107, Length=542, Percent_Identity=24.5387453874539, Blast_Score=84, Evalue=3e-17, Organism=Escherichia coli, GI87081709, Length=231, Percent_Identity=27.7056277056277, Blast_Score=80, Evalue=4e-16, Organism=Escherichia coli, GI1787029, Length=232, Percent_Identity=27.5862068965517, Blast_Score=79, Evalue=8e-16, Organism=Escherichia coli, GI1790525, Length=549, Percent_Identity=22.9508196721311, Blast_Score=77, Evalue=3e-15, Organism=Escherichia coli, GI1789873, Length=228, Percent_Identity=29.3859649122807, Blast_Score=77, Evalue=4e-15, Organism=Escherichia coli, GI1788165, Length=188, Percent_Identity=31.3829787234043, Blast_Score=77, Evalue=5e-15, Organism=Escherichia coli, GI1788761, Length=235, Percent_Identity=29.7872340425532, Blast_Score=76, Evalue=6e-15, Organism=Escherichia coli, GI87081834, Length=210, Percent_Identity=30.4761904761905, Blast_Score=75, Evalue=9e-15, Organism=Escherichia coli, GI1787143, Length=244, Percent_Identity=30.327868852459, Blast_Score=75, Evalue=1e-14, Organism=Escherichia coli, GI1786872, Length=229, Percent_Identity=28.3842794759825, Blast_Score=73, Evalue=5e-14, Organism=Escherichia coli, GI1788506, Length=228, Percent_Identity=29.3859649122807, Blast_Score=72, Evalue=1e-13, Organism=Escherichia coli, GI1788897, Length=212, Percent_Identity=25, Blast_Score=72, Evalue=1e-13, Organism=Escherichia coli, GI48995001, Length=220, Percent_Identity=28.1818181818182, Blast_Score=68, Evalue=2e-12, Organism=Escherichia coli, GI1789864, Length=234, Percent_Identity=24.3589743589744, Blast_Score=67, Evalue=3e-12, Organism=Escherichia coli, GI1789032, Length=214, Percent_Identity=29.9065420560748, Blast_Score=66, Evalue=5e-12, Organism=Escherichia coli, GI1786398, Length=215, Percent_Identity=25.5813953488372, Blast_Score=64, Evalue=3e-11, Organism=Caenorhabditis elegans, GI17559834, Length=550, Percent_Identity=27.6363636363636, Blast_Score=211, Evalue=1e-54, Organism=Caenorhabditis elegans, GI17555318, Length=518, Percent_Identity=28.1853281853282, Blast_Score=199, Evalue=5e-51, Organism=Caenorhabditis elegans, GI17553372, Length=539, Percent_Identity=29.6846011131725, Blast_Score=176, Evalue=5e-44, Organism=Caenorhabditis elegans, GI71992290, Length=276, Percent_Identity=27.1739130434783, Blast_Score=77, Evalue=3e-14, Organism=Caenorhabditis elegans, GI17565938, Length=248, Percent_Identity=28.2258064516129, Blast_Score=71, Evalue=2e-12, Organism=Caenorhabditis elegans, GI17543740, Length=231, Percent_Identity=29.4372294372294, Blast_Score=69, Evalue=6e-12, Organism=Caenorhabditis elegans, GI17569145, Length=307, Percent_Identity=26.7100977198697, Blast_Score=68, Evalue=2e-11, Organism=Caenorhabditis elegans, GI193202349, Length=247, Percent_Identity=29.1497975708502, Blast_Score=67, Evalue=4e-11, Organism=Caenorhabditis elegans, GI17533971, Length=218, Percent_Identity=27.0642201834862, Blast_Score=65, Evalue=8e-11, Organism=Saccharomyces cerevisiae, GI6320874, Length=544, Percent_Identity=29.7794117647059, Blast_Score=192, Evalue=1e-49, Organism=Saccharomyces cerevisiae, GI6321121, Length=555, Percent_Identity=29.7297297297297, Blast_Score=192, Evalue=2e-49, Organism=Saccharomyces cerevisiae, GI6325030, Length=390, Percent_Identity=27.6923076923077, Blast_Score=128, Evalue=3e-30, Organism=Saccharomyces cerevisiae, GI6324314, Length=388, Percent_Identity=27.0618556701031, Blast_Score=110, Evalue=5e-25, Organism=Saccharomyces cerevisiae, GI6323278, Length=381, Percent_Identity=29.9212598425197, Blast_Score=107, Evalue=4e-24, Organism=Drosophila melanogaster, GI24666836, Length=537, Percent_Identity=29.7951582867784, Blast_Score=213, Evalue=4e-55, Organism=Drosophila melanogaster, GI24641342, Length=540, Percent_Identity=27.962962962963, Blast_Score=197, Evalue=2e-50, Organism=Drosophila melanogaster, GI24642252, Length=556, Percent_Identity=27.6978417266187, Blast_Score=196, Evalue=3e-50, Organism=Drosophila melanogaster, GI18859989, Length=556, Percent_Identity=27.6978417266187, Blast_Score=196, Evalue=3e-50, Organism=Drosophila melanogaster, GI24659289, Length=243, Percent_Identity=29.6296296296296, Blast_Score=67, Evalue=5e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003439 - InterPro: IPR017871 - InterPro: IPR003593 [H]
Pfam domain/function: PF00005 ABC_tran [H]
EC number: NA
Molecular weight: Translated: 71315; Mature: 71315
Theoretical pI: Translated: 4.71; Mature: 4.71
Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MENIMAYITLRDVQLAFGGPALLDGANFVLERGERVCLIGRNGEGKSTLLKLIEGSLLPD CCCEEEEEEEEEEEEECCCCHHHCCHHHHHHCCCEEEEEECCCCCHHHHHHHHHCCCCCC RGEVSIQNGLTVSMLAQDVPMDSGKVADIVADGAGEAAIVLRAYHEASDACVLGDMEACD CCCEEECCCCEEEHHHHHCCCCCCCEEEEEECCCCCEEEEEEEHHCCCCCEEECCHHHHH RMGHLQHKLDQVDGWALENKVNTILGKMGLDPDADLADLSGGRKRRVLLARALLTQPDIL HHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCHHHCCCCCHHHHHHHHHHHCCCCEE LLDEPTNHLDVESIEWLEKFLLEQNNLTLLFISHDRSFVDRLATRIVELDRGILRSYEGN EEECCCCCCCHHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCC YSRYLDLKAQQLEAEEKQNALFEKKLAEEEAWIRQGIKARRTRNEGRVRALKDLREESKA CCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCCCCHHHHHHHHHHHHHH RRFQQGKVNMGVQDAQRSGKLVFDIENLSVSYDSNLLIRDFSAVVLRGDRIGLVGDNGVG HHHHCCCCCCCHHHHHHCCCEEEEEECCEEECCCCEEEEECEEEEEECCEEEEECCCCCC KTTLIKAILGEIEHTGTVKTGTQLEVAYFDQLRNQLELEKSVMANVSEGSDFVDVNGQRR HHHHHHHHHHHHHCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCHH HIYSYLQDFLFSPERARTPVKALSGGERNRVLLAKLLLKPSNLIVMDEPTNDLDMVTLEL HHHHHHHHHHCCCHHHCCCHHHHCCCCCCHHHHHHHHCCCCCEEEEECCCCCHHHHHHHH LEEMLAEYKGTLLLISHDRAFMDNVVTSTWVFDGKGSIEEYVGGYQDYLLQRPNQTVVDQ HHHHHHHHCCEEEEEECCHHHHHHHHHHEEEECCCCCHHHHHCCHHHHHHCCCCCCHHCC KSEVKKAQAKAEAANTPAPAKKVKLSFKDQRELEQLPVEIEKLEAEQSTLSDELADGSWF HHHHHHHHHHHHHCCCCCCCHHEEECCCHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCEE LKDATAATQASQRLAEIEEALLEKLERWDELEQMSKGN EHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MENIMAYITLRDVQLAFGGPALLDGANFVLERGERVCLIGRNGEGKSTLLKLIEGSLLPD CCCEEEEEEEEEEEEECCCCHHHCCHHHHHHCCCEEEEEECCCCCHHHHHHHHHCCCCCC RGEVSIQNGLTVSMLAQDVPMDSGKVADIVADGAGEAAIVLRAYHEASDACVLGDMEACD CCCEEECCCCEEEHHHHHCCCCCCCEEEEEECCCCCEEEEEEEHHCCCCCEEECCHHHHH RMGHLQHKLDQVDGWALENKVNTILGKMGLDPDADLADLSGGRKRRVLLARALLTQPDIL HHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCHHHCCCCCHHHHHHHHHHHCCCCEE LLDEPTNHLDVESIEWLEKFLLEQNNLTLLFISHDRSFVDRLATRIVELDRGILRSYEGN EEECCCCCCCHHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCC YSRYLDLKAQQLEAEEKQNALFEKKLAEEEAWIRQGIKARRTRNEGRVRALKDLREESKA CCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCCCCHHHHHHHHHHHHHH RRFQQGKVNMGVQDAQRSGKLVFDIENLSVSYDSNLLIRDFSAVVLRGDRIGLVGDNGVG HHHHCCCCCCCHHHHHHCCCEEEEEECCEEECCCCEEEEECEEEEEECCEEEEECCCCCC KTTLIKAILGEIEHTGTVKTGTQLEVAYFDQLRNQLELEKSVMANVSEGSDFVDVNGQRR HHHHHHHHHHHHHCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCHH HIYSYLQDFLFSPERARTPVKALSGGERNRVLLAKLLLKPSNLIVMDEPTNDLDMVTLEL HHHHHHHHHHCCCHHHCCCHHHHCCCCCCHHHHHHHHCCCCCEEEEECCCCCHHHHHHHH LEEMLAEYKGTLLLISHDRAFMDNVVTSTWVFDGKGSIEEYVGGYQDYLLQRPNQTVVDQ HHHHHHHHCCEEEEEECCHHHHHHHHHHEEEECCCCCHHHHHCCHHHHHHCCCCCCHHCC KSEVKKAQAKAEAANTPAPAKKVKLSFKDQRELEQLPVEIEKLEAEQSTLSDELADGSWF HHHHHHHHHHHHHCCCCCCCHHEEECCCHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCEE LKDATAATQASQRLAEIEEALLEKLERWDELEQMSKGN EHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Endonuclease; Excision [C]
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]