Click here to switch to the map view.

The map label for this gene is yahN [H]

Identifier: 50083727

GI number: 50083727

Start: 480159

End: 480791

Strand: Reverse

Name: yahN [H]

Synonym: ACIAD0486

Alternate gene names: 50083727

Gene position: 480791-480159 (Counterclockwise)

Preceding gene: 50083728

Following gene: 50083726

Centisome position: 13.36

GC content: 40.44

Gene sequence:

>633_bases
ATGCTAGATCTTTCTCAAATTTTGGCATTCGGACTCATTTGCTTGGCGATGGTAATCACCCCAGGCCCGAATATGATTTA
TCTTATCTCTCGCTCCATTAGTCAGGGCAAAATCGCAGGATTTATTTCCCTCGGTGGCGTTGCGGTTGGTTTTGTATTTT
ATATGCTCTGCGCTTCTTTCGGGATCACAGCGCTTGTGGTCGCAGTTCCATATGCTTATGACACTATTCGTATTGTAGGT
GCCCTATATTTACTTTGGCTGGCATGGAAAGCCTTACGTCCAAATGCAGCACCTATTTTTAGTGTAAAAGACTTATCTAT
CGATTCACCATTAAAACTATTTTTAATGGGCTTTTTGACAAATTTACTTAATCCTAAAATTGCCATTATGTATTTGTCTT
TATTGCCACAGTTTATACATCCACAGCAAGGCAGTATTTTGGCGCAGTCTATTCAACTCGGAACCATACAAATTTTTGTA
AGTGTTTCAGTCAATGCACTGATTGTGTTTTCTGCAGGCAGCATTGCACTTTTTCTACAGCAAAAACCACTTTGGGCAAG
CATCCAACGCTGGATTATGGGTACTGTATTAGCTGGACTCGCTGTCCGTATTCTTTTAGAACACCGCAAATAA

Upstream 100 bases:

>100_bases
GTCAGCCTTAATCGTTTAAAATATCACGCTGATTGAAGATAAGACTTATAAAAATAATTATGTTATATCTACCAATATAA
TAATATTCGGGTAATTTTTC

Downstream 100 bases:

>100_bases
ATATCGCCTGATAAAAGGACAATGTGATTTATTTGAACTTAATATATTTAGTTAAATGAGCAATAGATTATTAAATCATA
CTTTATGAAAAGATGATAAA

Product: transporter protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 210; Mature: 210

Protein sequence:

>210_residues
MLDLSQILAFGLICLAMVITPGPNMIYLISRSISQGKIAGFISLGGVAVGFVFYMLCASFGITALVVAVPYAYDTIRIVG
ALYLLWLAWKALRPNAAPIFSVKDLSIDSPLKLFLMGFLTNLLNPKIAIMYLSLLPQFIHPQQGSILAQSIQLGTIQIFV
SVSVNALIVFSAGSIALFLQQKPLWASIQRWIMGTVLAGLAVRILLEHRK

Sequences:

>Translated_210_residues
MLDLSQILAFGLICLAMVITPGPNMIYLISRSISQGKIAGFISLGGVAVGFVFYMLCASFGITALVVAVPYAYDTIRIVG
ALYLLWLAWKALRPNAAPIFSVKDLSIDSPLKLFLMGFLTNLLNPKIAIMYLSLLPQFIHPQQGSILAQSIQLGTIQIFV
SVSVNALIVFSAGSIALFLQQKPLWASIQRWIMGTVLAGLAVRILLEHRK
>Mature_210_residues
MLDLSQILAFGLICLAMVITPGPNMIYLISRSISQGKIAGFISLGGVAVGFVFYMLCASFGITALVVAVPYAYDTIRIVG
ALYLLWLAWKALRPNAAPIFSVKDLSIDSPLKLFLMGFLTNLLNPKIAIMYLSLLPQFIHPQQGSILAQSIQLGTIQIFV
SVSVNALIVFSAGSIALFLQQKPLWASIQRWIMGTVLAGLAVRILLEHRK

Specific function: Unknown

COG id: COG1280

COG function: function code E; Putative threonine efflux protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rht family [H]

Homologues:

Organism=Escherichia coli, GI1786522, Length=190, Percent_Identity=27.8947368421053, Blast_Score=77, Evalue=1e-15,
Organism=Escherichia coli, GI1788099, Length=196, Percent_Identity=27.5510204081633, Blast_Score=72, Evalue=2e-14,
Organism=Escherichia coli, GI48994979, Length=164, Percent_Identity=29.8780487804878, Blast_Score=67, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004778
- InterPro:   IPR001123 [H]

Pfam domain/function: PF01810 LysE [H]

EC number: NA

Molecular weight: Translated: 22881; Mature: 22881

Theoretical pI: Translated: 10.25; Mature: 10.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLDLSQILAFGLICLAMVITPGPNMIYLISRSISQGKIAGFISLGGVAVGFVFYMLCASF
CCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
GITALVVAVPYAYDTIRIVGALYLLWLAWKALRPNAAPIFSVKDLSIDSPLKLFLMGFLT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHH
NLLNPKIAIMYLSLLPQFIHPQQGSILAQSIQLGTIQIFVSVSVNALIVFSAGSIALFLQ
HHCCCHHHHHHHHHHHHHHCCCCCCHHHHHHEECEEEEEEEECEEEEEEEECCCEEEEEE
QKPLWASIQRWIMGTVLAGLAVRILLEHRK
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLDLSQILAFGLICLAMVITPGPNMIYLISRSISQGKIAGFISLGGVAVGFVFYMLCASF
CCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
GITALVVAVPYAYDTIRIVGALYLLWLAWKALRPNAAPIFSVKDLSIDSPLKLFLMGFLT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHH
NLLNPKIAIMYLSLLPQFIHPQQGSILAQSIQLGTIQIFVSVSVNALIVFSAGSIALFLQ
HHCCCHHHHHHHHHHHHHHCCCCCCHHHHHHEECEEEEEEEECEEEEEEEECCCEEEEEE
QKPLWASIQRWIMGTVLAGLAVRILLEHRK
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]