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The map label for this gene is xcpS [H]

Identifier: 50083666

GI number: 50083666

Start: 413360

End: 414565

Strand: Direct

Name: xcpS [H]

Synonym: ACIAD0411

Alternate gene names: 50083666

Gene position: 413360-414565 (Clockwise)

Preceding gene: 50083660

Following gene: 50083667

Centisome position: 11.49

GC content: 44.94

Gene sequence:

>1206_bases
ATGCCTGCATATCAATTTACCGCACTTGATGCATCTGGAAAACAGCAAAAGGGTGTTCTGGAGGGAGATTCTGCCCGTCA
GATTCGTCAACAATTACGTGATCGTGAATGGACACCCATTGCTGTCGATCCTGTCGAGCAAAAGGATAAACGTCAGGGAA
ATACATGGTTCCAAAAAAAAGTTACTGCCTATGATCTTGCATTAATGACGCGTCAATTATCAGTCTTGGTGGCTGCGGCT
ATTCCACTTGAAGAGGCATTGCGTGCCGTGGCTAAACAGAGTGAGAAAGCACATGTCCAGAATTTACTGCTCTCGGTACG
TTCCAAGGTATTAGAAGGGCATTCACTGGCGCAAGGTATGCAGCAGTCAGGCCGTTTTCCTGATCTATATATTGCGACCA
TTGCTGCGGGTGAGCGTTCAGGGCATTTAGATCTGATTTTAGATCAGCTTGCGGATTACACCGAAAACCGCTTTGCCATG
CAAAAGAAAGTTCAGGGCGCCATGATTTATCCGATTATCCTGATGCTGATGTCGTTTGCCATTGTGATGGGACTAATGAC
GTATGTGGTGCCAGATATTGTCAAAACCTTTGATCAGAGCAAAGAAGCATTGCCCTGGATTACGGTTGCGCTCATGAAAG
CCAGTGATTTTATTCGTCTTGCTTGGCCATTTTTAATGAGTTTTGGCGTGATTGCCATTATTTTGTTTATACGATTTTTA
AGAACCCATGCAGGTCATTATGCGTTTGATCGTTTAACACTCAGATTGCCATTATTTGGTAAATTATCACGTGGTATAAA
CTCGGCGCGCTTTGCAAGTACCCTGTCTATTTTGACTCAATCAGGCGTGCCTTTGGTCGATGCCTTGCGTATTGGTGCCG
CGGTCAGTAGTAACTGGGTGATCCGTGATGCCATCAATCATGCGGCAGAAAAAGTCACAGAAGGTGGGAACTTGGGTACA
CAACTGGAACGATGTGGTTATTTTCCACCAATGATGGTACAAATGATTCGAAGCGGTGAAACGTCTGGTGAGCTGGATCG
GATGCTTGAACGCGCATCGACCATGCAGGATCGTGAAGTCACGACATTTATTTCAACCTTGTTGGCATTACTCGAACCTT
TAATGCTGGTGTTGATGGCAGCCATCGTACTGGTCATTGTGATTGCAGTCATGCTACCGATCGTTAATATGAATAATATG
ATTTAG

Upstream 100 bases:

>100_bases
ATACTCACACAGTGTGAGCAAATTCCCCAAAATATGAAGGATTCTGAGGGAAAGATGCAACATCAACATGATTATTTTTT
GGAAAAACTAGAGCATTACA

Downstream 100 bases:

>100_bases
AAAATTTGATATTCGAGATGAAAATGGATCAGAAAGAAACAATTTTAAATAATACGTGTGTCTCTGCGACTCAAACAAAA
ATGATTCGTCCGAAACGCGT

Product: general secretion pathway protein F

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 401; Mature: 400

Protein sequence:

>401_residues
MPAYQFTALDASGKQQKGVLEGDSARQIRQQLRDREWTPIAVDPVEQKDKRQGNTWFQKKVTAYDLALMTRQLSVLVAAA
IPLEEALRAVAKQSEKAHVQNLLLSVRSKVLEGHSLAQGMQQSGRFPDLYIATIAAGERSGHLDLILDQLADYTENRFAM
QKKVQGAMIYPIILMLMSFAIVMGLMTYVVPDIVKTFDQSKEALPWITVALMKASDFIRLAWPFLMSFGVIAIILFIRFL
RTHAGHYAFDRLTLRLPLFGKLSRGINSARFASTLSILTQSGVPLVDALRIGAAVSSNWVIRDAINHAAEKVTEGGNLGT
QLERCGYFPPMMVQMIRSGETSGELDRMLERASTMQDREVTTFISTLLALLEPLMLVLMAAIVLVIVIAVMLPIVNMNNM
I

Sequences:

>Translated_401_residues
MPAYQFTALDASGKQQKGVLEGDSARQIRQQLRDREWTPIAVDPVEQKDKRQGNTWFQKKVTAYDLALMTRQLSVLVAAA
IPLEEALRAVAKQSEKAHVQNLLLSVRSKVLEGHSLAQGMQQSGRFPDLYIATIAAGERSGHLDLILDQLADYTENRFAM
QKKVQGAMIYPIILMLMSFAIVMGLMTYVVPDIVKTFDQSKEALPWITVALMKASDFIRLAWPFLMSFGVIAIILFIRFL
RTHAGHYAFDRLTLRLPLFGKLSRGINSARFASTLSILTQSGVPLVDALRIGAAVSSNWVIRDAINHAAEKVTEGGNLGT
QLERCGYFPPMMVQMIRSGETSGELDRMLERASTMQDREVTTFISTLLALLEPLMLVLMAAIVLVIVIAVMLPIVNMNNM
I
>Mature_400_residues
PAYQFTALDASGKQQKGVLEGDSARQIRQQLRDREWTPIAVDPVEQKDKRQGNTWFQKKVTAYDLALMTRQLSVLVAAAI
PLEEALRAVAKQSEKAHVQNLLLSVRSKVLEGHSLAQGMQQSGRFPDLYIATIAAGERSGHLDLILDQLADYTENRFAMQ
KKVQGAMIYPIILMLMSFAIVMGLMTYVVPDIVKTFDQSKEALPWITVALMKASDFIRLAWPFLMSFGVIAIILFIRFLR
THAGHYAFDRLTLRLPLFGKLSRGINSARFASTLSILTQSGVPLVDALRIGAAVSSNWVIRDAINHAAEKVTEGGNLGTQ
LERCGYFPPMMVQMIRSGETSGELDRMLERASTMQDREVTTFISTLLALLEPLMLVLMAAIVLVIVIAVMLPIVNMNNMI

Specific function: Involved in a general secretion pathway (GSP) for the export of proteins. Required for the translocation of a variety of enzymes across the outer membrane [H]

COG id: COG1459

COG function: function code NU; Type II secretory pathway, component PulF

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GSP F family [H]

Homologues:

Organism=Escherichia coli, GI1789724, Length=399, Percent_Identity=36.0902255639098, Blast_Score=253, Evalue=1e-68,
Organism=Escherichia coli, GI1786295, Length=401, Percent_Identity=25.9351620947631, Blast_Score=120, Evalue=2e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003004
- InterPro:   IPR011850
- InterPro:   IPR018076
- InterPro:   IPR001992 [H]

Pfam domain/function: PF00482 GSPII_F [H]

EC number: NA

Molecular weight: Translated: 44611; Mature: 44480

Theoretical pI: Translated: 9.64; Mature: 9.64

Prosite motif: PS00874 T2SP_F

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
5.2 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPAYQFTALDASGKQQKGVLEGDSARQIRQQLRDREWTPIAVDPVEQKDKRQGNTWFQKK
CCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEECCCCHHHHHCCCHHHHHH
VTAYDLALMTRQLSVLVAAAIPLEEALRAVAKQSEKAHVQNLLLSVRSKVLEGHSLAQGM
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QQSGRFPDLYIATIAAGERSGHLDLILDQLADYTENRFAMQKKVQGAMIYPIILMLMSFA
HHCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
IVMGLMTYVVPDIVKTFDQSKEALPWITVALMKASDFIRLAWPFLMSFGVIAIILFIRFL
HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RTHAGHYAFDRLTLRLPLFGKLSRGINSARFASTLSILTQSGVPLVDALRIGAAVSSNWV
HHHCCCHHHHHHHEECCHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCH
IRDAINHAAEKVTEGGNLGTQLERCGYFPPMMVQMIRSGETSGELDRMLERASTMQDREV
HHHHHHHHHHHHHCCCCCCHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
TTFISTLLALLEPLMLVLMAAIVLVIVIAVMLPIVNMNNMI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
PAYQFTALDASGKQQKGVLEGDSARQIRQQLRDREWTPIAVDPVEQKDKRQGNTWFQKK
CCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEECCCCHHHHHCCCHHHHHH
VTAYDLALMTRQLSVLVAAAIPLEEALRAVAKQSEKAHVQNLLLSVRSKVLEGHSLAQGM
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QQSGRFPDLYIATIAAGERSGHLDLILDQLADYTENRFAMQKKVQGAMIYPIILMLMSFA
HHCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
IVMGLMTYVVPDIVKTFDQSKEALPWITVALMKASDFIRLAWPFLMSFGVIAIILFIRFL
HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RTHAGHYAFDRLTLRLPLFGKLSRGINSARFASTLSILTQSGVPLVDALRIGAAVSSNWV
HHHCCCHHHHHHHEECCHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCH
IRDAINHAAEKVTEGGNLGTQLERCGYFPPMMVQMIRSGETSGELDRMLERASTMQDREV
HHHHHHHHHHHHHCCCCCCHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
TTFISTLLALLEPLMLVLMAAIVLVIVIAVMLPIVNMNNMI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1588814; 10984043 [H]