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The map label for this gene is ompW [H]

Identifier: 50083585

GI number: 50083585

Start: 314778

End: 315404

Strand: Direct

Name: ompW [H]

Synonym: ACIAD0314

Alternate gene names: 50083585

Gene position: 314778-315404 (Clockwise)

Preceding gene: 50083584

Following gene: 50083586

Centisome position: 8.75

GC content: 40.51

Gene sequence:

>627_bases
ATGTTAGGTAAATTATTTGTTGTAGCATTAATGGGTTTGTCATCTTCTGTATTTGCAGGTGGTTGGCAAGTTAAAATTGG
TGGTAGTGTTTTAGCGCCATCAAAAGACAATAATACTTTGGCTGATGGTGCGGTAACCAATGCAAAAGCCGATCATGCTT
TTAGTTTTACCCCATCGATTGAATATTTCTTCGGTGATACGAATATTTCTTCAGAGTTATTATTGGCGACACCATTTAAG
CATGATGTCACTGCCAATGTCGCGGGTGGGCCATCTGAAACAATTGCATCATTCAAGCATTTACCGCCTACATTAACGGT
GAAATATAACTTTAAAAATTCAACAGGTTTTACGCCATATATAGGTATAGGCGCAACAGCCGTGATTGCCTGGGATGAAG
AGACCAAAGGTTCACTGACAGGCACTGAACTTAAAGCAGAAAATGCATACGGTATCGCGGGTCAGGTCGGTTTTAATTTT
CAACCTGCCGATGCTAAAAACTGGGGTGTTTTTGCCGATGTGCGTTATGCCGATGTAGGCTCTGAACTGAAATGGAATGG
CCAGAAAATTGGTACGTTGGAAGTCAATCCATGGGTTTACAGTGTTGGCTATAGTTATAAATTTTAA

Upstream 100 bases:

>100_bases
ACAAATTATTAAAAATATTGTTGTTAATTAATTTATAATCCATATTGCATTAAATTAAAATAGATGTTTATTATTATAAA
AGAAGTTGAGGGGTAGTAAA

Downstream 100 bases:

>100_bases
CCAGCGACCGAACAAAATAAACCGTACAACATAATTAAAAGTAAATCAGAACAATAACCCAATAATAATAACGATAATGT
GCAATCGGCGATTTAGACCT

Product: outer membrane protein W

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 208; Mature: 208

Protein sequence:

>208_residues
MLGKLFVVALMGLSSSVFAGGWQVKIGGSVLAPSKDNNTLADGAVTNAKADHAFSFTPSIEYFFGDTNISSELLLATPFK
HDVTANVAGGPSETIASFKHLPPTLTVKYNFKNSTGFTPYIGIGATAVIAWDEETKGSLTGTELKAENAYGIAGQVGFNF
QPADAKNWGVFADVRYADVGSELKWNGQKIGTLEVNPWVYSVGYSYKF

Sequences:

>Translated_208_residues
MLGKLFVVALMGLSSSVFAGGWQVKIGGSVLAPSKDNNTLADGAVTNAKADHAFSFTPSIEYFFGDTNISSELLLATPFK
HDVTANVAGGPSETIASFKHLPPTLTVKYNFKNSTGFTPYIGIGATAVIAWDEETKGSLTGTELKAENAYGIAGQVGFNF
QPADAKNWGVFADVRYADVGSELKWNGQKIGTLEVNPWVYSVGYSYKF
>Mature_208_residues
MLGKLFVVALMGLSSSVFAGGWQVKIGGSVLAPSKDNNTLADGAVTNAKADHAFSFTPSIEYFFGDTNISSELLLATPFK
HDVTANVAGGPSETIASFKHLPPTLTVKYNFKNSTGFTPYIGIGATAVIAWDEETKGSLTGTELKAENAYGIAGQVGFNF
QPADAKNWGVFADVRYADVGSELKWNGQKIGTLEVNPWVYSVGYSYKF

Specific function: Acts As A Receptor For Colicin S4. [C]

COG id: COG3047

COG function: function code M; Outer membrane protein W

Gene ontology:

Cell location: Cell outer membrane [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the OmpW/AlkL family [H]

Homologues:

Organism=Escherichia coli, GI1787510, Length=224, Percent_Identity=29.4642857142857, Blast_Score=73, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011250
- InterPro:   IPR005618 [H]

Pfam domain/function: PF03922 OmpW [H]

EC number: NA

Molecular weight: Translated: 22181; Mature: 22181

Theoretical pI: Translated: 5.68; Mature: 5.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLGKLFVVALMGLSSSVFAGGWQVKIGGSVLAPSKDNNTLADGAVTNAKADHAFSFTPSI
CCCHHEEHHHHCCCCCEECCCEEEEECCEEECCCCCCCEECCCCCCCCCCCCEEEECCCE
EYFFGDTNISSELLLATPFKHDVTANVAGGPSETIASFKHLPPTLTVKYNFKNSTGFTPY
EEEECCCCCCCCEEEECCCCCCEEEEECCCCHHHHHHHHCCCCEEEEEEEECCCCCCCEE
IGIGATAVIAWDEETKGSLTGTELKAENAYGIAGQVGFNFQPADAKNWGVFADVRYADVG
ECCCEEEEEEECCCCCCCCCCCEEECCCCCEEEEECCCEECCCCCCCCCEEEEEEEECCC
SELKWNGQKIGTLEVNPWVYSVGYSYKF
CCEEECCEEEEEEEECCEEEEECEEECC
>Mature Secondary Structure
MLGKLFVVALMGLSSSVFAGGWQVKIGGSVLAPSKDNNTLADGAVTNAKADHAFSFTPSI
CCCHHEEHHHHCCCCCEECCCEEEEECCEEECCCCCCCEECCCCCCCCCCCCEEEECCCE
EYFFGDTNISSELLLATPFKHDVTANVAGGPSETIASFKHLPPTLTVKYNFKNSTGFTPY
EEEECCCCCCCCEEEECCCCCCEEEEECCCCHHHHHHHHCCCCEEEEEEEECCCCCCCEE
IGIGATAVIAWDEETKGSLTGTELKAENAYGIAGQVGFNFQPADAKNWGVFADVRYADVG
ECCCEEEEEEECCCCCCCCCCCEEECCCCCEEEEECCCEECCCCCCCCCEEEEEEEECCC
SELKWNGQKIGTLEVNPWVYSVGYSYKF
CCEEECCEEEEEEEECCEEEEECEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 2336399; 10952301 [H]