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The map label for this gene is hvrA [H]

Identifier: 50083565

GI number: 50083565

Start: 289162

End: 289488

Strand: Direct

Name: hvrA [H]

Synonym: ACIAD0291

Alternate gene names: 50083565

Gene position: 289162-289488 (Clockwise)

Preceding gene: 50083564

Following gene: 50083566

Centisome position: 8.04

GC content: 37.92

Gene sequence:

>327_bases
ATGAAACCAGATATTAGTGAGCTATCAGTAGAAGAGTTGAAACGTTTGCAAGAAGAAGCAGAAGCTTTAATTGCGACGAA
AAAAGATCAGGCAATTGAAGATGCGTATAATCAATTACTTGAAGTTGCAGAAAATGTAGGTTATACCGTTGAACAGCTAC
TTGAATATGGTGCTCAAAAACGTAAAAAAACAACACGTAAATCTGTTGAGCCACGTTACCGCAATAAACACAATGCTGAA
GAAACCTGGACAGGTCGTGGTAAGCAACCACGCTGGTTAGTTGCTGAACTTGAAAAAGGTGCAAAATTAGAAGATTTCCT
GATCTAA

Upstream 100 bases:

>100_bases
TCAAAGCAATATAAATAGTATTGCTTTGAATTTAATTCAAAGAATTATTTTTTTATTTGTCTGTCGTCTAAAAGTTTTTT
TAAATCGGAGTGGGTTCTAA

Downstream 100 bases:

>100_bases
TTTCATCATTTGGTCATGAATGACCAATATGCTTAATAAAACCAAGCTTGAATGCTTGGTTTTTTTATACAAGTGAATTG
GCGATGATGGAAAAGTATGC

Product: DNA binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 108; Mature: 108

Protein sequence:

>108_residues
MKPDISELSVEELKRLQEEAEALIATKKDQAIEDAYNQLLEVAENVGYTVEQLLEYGAQKRKKTTRKSVEPRYRNKHNAE
ETWTGRGKQPRWLVAELEKGAKLEDFLI

Sequences:

>Translated_108_residues
MKPDISELSVEELKRLQEEAEALIATKKDQAIEDAYNQLLEVAENVGYTVEQLLEYGAQKRKKTTRKSVEPRYRNKHNAE
ETWTGRGKQPRWLVAELEKGAKLEDFLI
>Mature_108_residues
MKPDISELSVEELKRLQEEAEALIATKKDQAIEDAYNQLLEVAENVGYTVEQLLEYGAQKRKKTTRKSVEPRYRNKHNAE
ETWTGRGKQPRWLVAELEKGAKLEDFLI

Specific function: It is a dim-light trans-acting activator of Puf and Puh expression, but has no effect on the expression of the Puc operon. It is responsible for regulating light-harvesting-I and reaction center structural gene expression differentially from that of light

COG id: COG2916

COG function: function code R; DNA-binding protein H-NS

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the histone-like protein H-NS family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001801 [H]

Pfam domain/function: PF00816 Histone_HNS [H]

EC number: NA

Molecular weight: Translated: 12531; Mature: 12531

Theoretical pI: Translated: 5.35; Mature: 5.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPDISELSVEELKRLQEEAEALIATKKDQAIEDAYNQLLEVAENVGYTVEQLLEYGAQK
CCCCHHHCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
RKKTTRKSVEPRYRNKHNAEETWTGRGKQPRWLVAELEKGAKLEDFLI
HHHHHHHHCCCHHCCCCCCCHHCCCCCCCCHHHHHHHHCCCCHHHHCC
>Mature Secondary Structure
MKPDISELSVEELKRLQEEAEALIATKKDQAIEDAYNQLLEVAENVGYTVEQLLEYGAQK
CCCCHHHCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
RKKTTRKSVEPRYRNKHNAEETWTGRGKQPRWLVAELEKGAKLEDFLI
HHHHHHHHCCCHHCCCCCCCHHCCCCCCCCHHHHHHHHCCCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7961455 [H]