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The map label for this gene is yoaB [C]

Identifier: 50083502

GI number: 50083502

Start: 222850

End: 223203

Strand: Reverse

Name: yoaB [C]

Synonym: ACIAD0222

Alternate gene names: 50083502

Gene position: 223203-222850 (Counterclockwise)

Preceding gene: 50083503

Following gene: 50083497

Centisome position: 6.2

GC content: 42.94

Gene sequence:

>354_bases
ATGAGCGTACAGCGCATACATGTAGAAAAACGCTTTTCTGAAATTGCCATTTCAGGCAATTTGGTTCATCTTGCGGGACA
GCTCGCAAGCGATACCCAGCTTGATATCAAAGGTCAGACCCAACAAACTCTGGATATCATTGATCGCTTTTTGGCTGATG
CAGGTACGGACAAAAGTCATATCTTATCAGTCATGATTTTCTTAAAAGATATCGAGCATGATTATGATGCAATGAATGAA
ATTTGGGATGCATGGTGTGCAGATATCCAAGCCCTTCCACGTACCTGTGTTGAAGCCAAGATGTATCGCCCAGACGTACT
AGTCGAAATGACTGTCACGGCTGTAAAACCCTAA

Upstream 100 bases:

>100_bases
TTTAACCATCGGTTGTTTACTCACCACGTGGGTTGCAGCACGAATGAAAGCCCAAGTACAATCAGTACATCCTTCTTCTG
GTTATGTTACAGGCAAATAA

Downstream 100 bases:

>100_bases
TTAGCCTTTGGCAAATGCACTATACTTGATCAATCTTTCGCTGGGTTCTGTCAAAATTGGATAATTCACTTCTTTAGGTA
ATACTGACTGATAAAAATCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 117; Mature: 116

Protein sequence:

>117_residues
MSVQRIHVEKRFSEIAISGNLVHLAGQLASDTQLDIKGQTQQTLDIIDRFLADAGTDKSHILSVMIFLKDIEHDYDAMNE
IWDAWCADIQALPRTCVEAKMYRPDVLVEMTVTAVKP

Sequences:

>Translated_117_residues
MSVQRIHVEKRFSEIAISGNLVHLAGQLASDTQLDIKGQTQQTLDIIDRFLADAGTDKSHILSVMIFLKDIEHDYDAMNE
IWDAWCADIQALPRTCVEAKMYRPDVLVEMTVTAVKP
>Mature_116_residues
SVQRIHVEKRFSEIAISGNLVHLAGQLASDTQLDIKGQTQQTLDIIDRFLADAGTDKSHILSVMIFLKDIEHDYDAMNEI
WDAWCADIQALPRTCVEAKMYRPDVLVEMTVTAVKP

Specific function: Unknown

COG id: COG0251

COG function: function code J; Putative translation initiation inhibitor, yjgF family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the RutC family [H]

Homologues:

Organism=Escherichia coli, GI87081979, Length=114, Percent_Identity=36.8421052631579, Blast_Score=71, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013813
- InterPro:   IPR006175
- InterPro:   IPR019897 [H]

Pfam domain/function: PF01042 Ribonuc_L-PSP [H]

EC number: NA

Molecular weight: Translated: 13200; Mature: 13069

Theoretical pI: Translated: 4.68; Mature: 4.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVQRIHVEKRFSEIAISGNLVHLAGQLASDTQLDIKGQTQQTLDIIDRFLADAGTDKSH
CCCHHHHHHHHHHHHHHCCCHHEEHHCCCCCCEEEECCCCHHHHHHHHHHHHCCCCCHHH
ILSVMIFLKDIEHDYDAMNEIWDAWCADIQALPRTCVEAKMYRPDVLVEMTVTAVKP
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCC
>Mature Secondary Structure 
SVQRIHVEKRFSEIAISGNLVHLAGQLASDTQLDIKGQTQQTLDIIDRFLADAGTDKSH
CCHHHHHHHHHHHHHHCCCHHEEHHCCCCCCEEEECCCCHHHHHHHHHHHHCCCCCHHH
ILSVMIFLKDIEHDYDAMNEIWDAWCADIQALPRTCVEAKMYRPDVLVEMTVTAVKP
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA