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The map label for this gene is atpF

Identifier: 50083465

GI number: 50083465

Start: 180289

End: 180759

Strand: Direct

Name: atpF

Synonym: ACIAD0183

Alternate gene names: 50083465

Gene position: 180289-180759 (Clockwise)

Preceding gene: 50083464

Following gene: 50083466

Centisome position: 5.01

GC content: 45.44

Gene sequence:

>471_bases
ATGAATATTAACCTCACATTGATTGGTCAGGCGATTGCATTTGCGATTTTTGTCGCATTCTGCATGAAATTCGTTTGGCC
ACCACTAATCAATGCGATTAGTGAGCGTCAGCGCAAAATCGCTGATGGCTTAAATGCTGCCGAAAAAGCAAAAGCTGATT
TAGCTGATGCTCAGGCGCAAGTTAAGCAAGAGCTTGATGCTGCGAAAGCACAAGCGGCTCAATTGATCGAACAAGCGAAC
CGTCGTGCGGCACAATTGATTGAAGAGGCGCGCACCCAGGCAACTGCTGAAGGTGAACGTATTCGTCAACAATCTAAAGA
GACTGTTGATCAAGAAATTAATGCTGCTCGTGAAGAATTACGTCAACAAGTGGCTGCTTTGGCCGTTGATGGTGCAGAGA
AAATTCTGAACCAGCAAGTTGATCAACAAGCTCATGCTGCCATGCTTGAACAGCTGGCTGCTAAACTTTAA

Upstream 100 bases:

>100_bases
GCCTATGATCGGTGTCGGTATTGGCTTGTTCTTCATCTTCGCTAATCCGTTTGTAGGTTAATCATCTTAATTCCGAAATC
CACCATTTTGAGGAATTGCT

Downstream 100 bases:

>100_bases
GCGAGGGAAGTATGGCTGAACTCTTGACGTTGGCACGCCCGTACGCTAAAGCAGCTTTTGCTTACGCTTCTGAGCAGGGT
GCGACAGATAACTGGTCCAC

Product: F0F1 ATP synthase subunit B

Products: ADP; phosphate; H+

Alternate protein names: ATP synthase F(0) sector subunit b; ATPase subunit I; F-type ATPase subunit b; F-ATPase subunit b

Number of amino acids: Translated: 156; Mature: 156

Protein sequence:

>156_residues
MNINLTLIGQAIAFAIFVAFCMKFVWPPLINAISERQRKIADGLNAAEKAKADLADAQAQVKQELDAAKAQAAQLIEQAN
RRAAQLIEEARTQATAEGERIRQQSKETVDQEINAAREELRQQVAALAVDGAEKILNQQVDQQAHAAMLEQLAAKL

Sequences:

>Translated_156_residues
MNINLTLIGQAIAFAIFVAFCMKFVWPPLINAISERQRKIADGLNAAEKAKADLADAQAQVKQELDAAKAQAAQLIEQAN
RRAAQLIEEARTQATAEGERIRQQSKETVDQEINAAREELRQQVAALAVDGAEKILNQQVDQQAHAAMLEQLAAKL
>Mature_156_residues
MNINLTLIGQAIAFAIFVAFCMKFVWPPLINAISERQRKIADGLNAAEKAKADLADAQAQVKQELDAAKAQAAQLIEQAN
RRAAQLIEEARTQATAEGERIRQQSKETVDQEINAAREELRQQVAALAVDGAEKILNQQVDQQAHAAMLEQLAAKL

Specific function: Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)

COG id: COG0711

COG function: function code C; F0F1-type ATP synthase, subunit b

Gene ontology:

Cell location: Cell inner membrane; Single-pass membrane protein

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase B chain family

Homologues:

Organism=Escherichia coli, GI1790174, Length=156, Percent_Identity=50.6410256410256, Blast_Score=153, Evalue=6e-39,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): ATPF_ACIAD (Q6FFK4)

Other databases:

- EMBL:   CR543861
- RefSeq:   YP_044975.1
- ProteinModelPortal:   Q6FFK4
- STRING:   Q6FFK4
- GeneID:   2878057
- GenomeReviews:   CR543861_GR
- KEGG:   aci:ACIAD0183
- NMPDR:   fig|62977.3.peg.270
- eggNOG:   COG0711
- HOGENOM:   HBG617328
- OMA:   NPGLIFW
- PhylomeDB:   Q6FFK4
- ProtClustDB:   PRK05759
- BioCyc:   ASP62977:ACIAD0183-MONOMER
- HAMAP:   MF_01398
- InterPro:   IPR002146
- InterPro:   IPR005864
- TIGRFAMs:   TIGR01144

Pfam domain/function: PF00430 ATP-synt_B

EC number: 3.6.3.14

Molecular weight: Translated: 17086; Mature: 17086

Theoretical pI: Translated: 5.02; Mature: 5.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x15f26640)-;

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNINLTLIGQAIAFAIFVAFCMKFVWPPLINAISERQRKIADGLNAAEKAKADLADAQAQ
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
VKQELDAAKAQAAQLIEQANRRAAQLIEEARTQATAEGERIRQQSKETVDQEINAAREEL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RQQVAALAVDGAEKILNQQVDQQAHAAMLEQLAAKL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCH
>Mature Secondary Structure
MNINLTLIGQAIAFAIFVAFCMKFVWPPLINAISERQRKIADGLNAAEKAKADLADAQAQ
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
VKQELDAAKAQAAQLIEQANRRAAQLIEEARTQATAEGERIRQQSKETVDQEINAAREEL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RQQVAALAVDGAEKILNQQVDQQAHAAMLEQLAAKL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: Borate; diphosphate; HCO3- [C]

Metal ions: Co2+; Fe2+; Mn2+; Zn2+ [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; H2O; H+

Specific reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out)

General reaction: Phosphorous acid anhydride hydrolysis [C]

Inhibitor: Ca2+; CN-; Efrapeptin; Ethidiumbromide; Guanidines analogs; Oligomycin; Quercetin; Trialkyl tin derivatives; Venturicidin [C]

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA