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The map label for this gene is rfaB [C]

Identifier: 50083381

GI number: 50083381

Start: 86571

End: 87671

Strand: Direct

Name: rfaB [C]

Synonym: ACIAD0090

Alternate gene names: 50083381

Gene position: 86571-87671 (Clockwise)

Preceding gene: 50083380

Following gene: 50083382

Centisome position: 2.41

GC content: 47.96

Gene sequence:

>1101_bases
ATGAAAAAAGTAGCGTTGGTCATTCCGACTTTGGGCGGTGGTGGTGCTGAGCGTACAGCAGTTTTACTGGCAAATGGCTT
TGCAGCAGCAGGGGTACATACCTCTGTGATTGTGGTGAATATACAGGGTGAAAAGGGCAAACTACAGGCTGAACTTGCCC
CACAGGTAGAACTTGTCGATCTGAATTGTAAACAAGTCAAATACATGACTCGGCCCTTTGCAGCATGGCTAAAACAGGCA
CAACCCGATGCGATCATTAGCACCATGACGCATACCAATATTATGGTGTATTGGGCCAAGTTACGTGCTGGTGTATCTTC
TAAATTGATTTGCCGTGAAACCAGTACTGCCAGTATAAATCTGAAGCACCGTACAGGGCTTAAAAAGTTTTTATTGCAAA
CGGCAATGCGCTGGGTCTATCAGCGCTGTGATGTGCTGGTTCCAGTTTCAAAGGGCGTGGCACAGGATATGCAGCAGTAT
CTTGGCGTGAGCTTGATCAAGACACAAGTGATTTATGACCCTGTGATTACGCCTGAGCTTTTTGATCTGGCACAGCGTAC
TGTTGATGATGCATGGTTTACCAGTACACATGATATTCCTGTCATTGTGGCTGCTGGACGCTTAACTGAAGCCAAGAATT
ACAGTTTGCTGTTGCGTGCATTTGCCGAGCTGATTCAATTTACACCTGCACATTTATTGATTTTGGGCGAAGGCGAACAG
CGTGCCTCACTGCAACAACTTGTTGAATCGTTAGGAATTGCAGCATCGGTGTCCATGCCAGGATTTCGTGCCAATCCATT
TGCCTATATGGCCAAGGCCGATGTCTATGTGATGAGTTCACAGTGGGAAGGCTTGCCAGGTGCCCTGATTCAGGCCTTGG
CCTTGCAATGTAATATTGTTTCGACTGACTGCCCAAGTGGCCCGCGTGAGATTCTGGAAGATGGGCGTTATGGCGTGCTG
GTGCCTAATCATGATCAAAAGGCCCTGACACAGGCCCTTCAAACTGTGCTGACAGGTCAGGTAAAAACCGAGAAATCACA
GCACGCGGAACAGATCTATGGGCTGGATGCCATTACCCAAGCCTATCTGGCGCTGATCTAA

Upstream 100 bases:

>100_bases
AGCTTGGGATTCAAAGTCTGGGTTGGGCACTCATGCTGGTCTATCTGGTGTCTGCGTTGTATTTGTTGATGAATATTATG
CTGTATAGGAAACGTACGCA

Downstream 100 bases:

>100_bases
ACGGGTGCTGTCATGAAAGTCTTGCATGTGATTACCAATTTTTCAGCCGTCGGCGGTGCAGAAACCATGCTGTCGCGTTT
GATTCTGGCTCAGCCTCAGT

Product: glycosyl transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 366; Mature: 366

Protein sequence:

>366_residues
MKKVALVIPTLGGGGAERTAVLLANGFAAAGVHTSVIVVNIQGEKGKLQAELAPQVELVDLNCKQVKYMTRPFAAWLKQA
QPDAIISTMTHTNIMVYWAKLRAGVSSKLICRETSTASINLKHRTGLKKFLLQTAMRWVYQRCDVLVPVSKGVAQDMQQY
LGVSLIKTQVIYDPVITPELFDLAQRTVDDAWFTSTHDIPVIVAAGRLTEAKNYSLLLRAFAELIQFTPAHLLILGEGEQ
RASLQQLVESLGIAASVSMPGFRANPFAYMAKADVYVMSSQWEGLPGALIQALALQCNIVSTDCPSGPREILEDGRYGVL
VPNHDQKALTQALQTVLTGQVKTEKSQHAEQIYGLDAITQAYLALI

Sequences:

>Translated_366_residues
MKKVALVIPTLGGGGAERTAVLLANGFAAAGVHTSVIVVNIQGEKGKLQAELAPQVELVDLNCKQVKYMTRPFAAWLKQA
QPDAIISTMTHTNIMVYWAKLRAGVSSKLICRETSTASINLKHRTGLKKFLLQTAMRWVYQRCDVLVPVSKGVAQDMQQY
LGVSLIKTQVIYDPVITPELFDLAQRTVDDAWFTSTHDIPVIVAAGRLTEAKNYSLLLRAFAELIQFTPAHLLILGEGEQ
RASLQQLVESLGIAASVSMPGFRANPFAYMAKADVYVMSSQWEGLPGALIQALALQCNIVSTDCPSGPREILEDGRYGVL
VPNHDQKALTQALQTVLTGQVKTEKSQHAEQIYGLDAITQAYLALI
>Mature_366_residues
MKKVALVIPTLGGGGAERTAVLLANGFAAAGVHTSVIVVNIQGEKGKLQAELAPQVELVDLNCKQVKYMTRPFAAWLKQA
QPDAIISTMTHTNIMVYWAKLRAGVSSKLICRETSTASINLKHRTGLKKFLLQTAMRWVYQRCDVLVPVSKGVAQDMQQY
LGVSLIKTQVIYDPVITPELFDLAQRTVDDAWFTSTHDIPVIVAAGRLTEAKNYSLLLRAFAELIQFTPAHLLILGEGEQ
RASLQQLVESLGIAASVSMPGFRANPFAYMAKADVYVMSSQWEGLPGALIQALALQCNIVSTDCPSGPREILEDGRYGVL
VPNHDQKALTQALQTVLTGQVKTEKSQHAEQIYGLDAITQAYLALI

Specific function: Adds A Galactose Goup To A Glucose Group Of Lps. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001296 [H]

Pfam domain/function: PF00534 Glycos_transf_1 [H]

EC number: 2.4.1.- [C]

Molecular weight: Translated: 39931; Mature: 39931

Theoretical pI: Translated: 8.45; Mature: 8.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKVALVIPTLGGGGAERTAVLLANGFAAAGVHTSVIVVNIQGEKGKLQAELAPQVELVD
CCCEEEEEEECCCCCCCCEEEEEECCCCCCCCEEEEEEEEEECCCCCEEEECCCCEEEEE
LNCKQVKYMTRPFAAWLKQAQPDAIISTMTHTNIMVYWAKLRAGVSSKLICRETSTASIN
CCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCEEEEEEEHHHCCCCCCEEEECCCCEEEE
LKHRTGLKKFLLQTAMRWVYQRCDVLVPVSKGVAQDMQQYLGVSLIKTQVIYDPVITPEL
EHHHHHHHHHHHHHHHHHHHHHCCEEEECHHHHHHHHHHHHCHHHHHHHHHCCCCCCHHH
FDLAQRTVDDAWFTSTHDIPVIVAAGRLTEAKNYSLLLRAFAELIQFTPAHLLILGEGEQ
HHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCH
RASLQQLVESLGIAASVSMPGFRANPFAYMAKADVYVMSSQWEGLPGALIQALALQCNIV
HHHHHHHHHHHCCEEEECCCCCCCCCEEEEEECEEEEEECCCCCCCHHHHHHHHHHEEEE
STDCPSGPREILEDGRYGVLVPNHDQKALTQALQTVLTGQVKTEKSQHAEQIYGLDAITQ
ECCCCCCHHHHHHCCCEEEEECCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH
AYLALI
HHHHCC
>Mature Secondary Structure
MKKVALVIPTLGGGGAERTAVLLANGFAAAGVHTSVIVVNIQGEKGKLQAELAPQVELVD
CCCEEEEEEECCCCCCCCEEEEEECCCCCCCCEEEEEEEEEECCCCCEEEECCCCEEEEE
LNCKQVKYMTRPFAAWLKQAQPDAIISTMTHTNIMVYWAKLRAGVSSKLICRETSTASIN
CCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCEEEEEEEHHHCCCCCCEEEECCCCEEEE
LKHRTGLKKFLLQTAMRWVYQRCDVLVPVSKGVAQDMQQYLGVSLIKTQVIYDPVITPEL
EHHHHHHHHHHHHHHHHHHHHHCCEEEECHHHHHHHHHHHHCHHHHHHHHHCCCCCCHHH
FDLAQRTVDDAWFTSTHDIPVIVAAGRLTEAKNYSLLLRAFAELIQFTPAHLLILGEGEQ
HHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCH
RASLQQLVESLGIAASVSMPGFRANPFAYMAKADVYVMSSQWEGLPGALIQALALQCNIV
HHHHHHHHHHHCCEEEECCCCCCCCCEEEEEECEEEEEECCCCCCCHHHHHHHHHHEEEE
STDCPSGPREILEDGRYGVLVPNHDQKALTQALQTVLTGQVKTEKSQHAEQIYGLDAITQ
ECCCCCCHHHHHHCCCEEEEECCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH
AYLALI
HHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Glycosyltransferases; Hexosyltransferases [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]