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The map label for this gene is 49481721

Identifier: 49481721

GI number: 49481721

Start: 5106249

End: 5106920

Strand: Reverse

Name: 49481721

Synonym: BT9727_5042

Alternate gene names: NA

Gene position: 5106920-5106249 (Counterclockwise)

Preceding gene: 49480805

Following gene: 49480427

Centisome position: 97.5

GC content: 32.74

Gene sequence:

>672_bases
ATGAAAGAGTTCGCTAATCCGTTTGTAATATTTGAAGTAGCTGGGGTGACAATGTTTTTAGCTTTTATAGCACTTTTAAT
ATGTGTTGCATCATGGGTATATACAGATGCTAAAGCACATCAAATGAGTAAAGGATGGAGTGTTTTAGCGGTTATATTGC
CATTCTTTATCGGGTTTTTATTATATATGGTAAGAAGAAGTAAAAAGAAAGTTGAAGGAGAATATAAGATGAATTTTGTT
AAAAAACAGAAAGTAACATTAGTTGCGATATTGGCAAGTACAATGTTTGTATTACTTAGTGGTTTTACTTTTGCACAAAC
GTTAGATGATGCGTGGAGAGCAGGAGATATATATTTAGAAAATGAGAAGCAAGGGGAGACAGGTTACGAGGCGAAATTCT
CATCATGGGATATTGCCGGTAAAGATATTGAACTTCAGTATGATAAGGATACAGAAGTGACATTTTCTTATGAGACAGAT
GCAAAAAGAGGGAACTTATGCTTTAGCTTGTATGAAAGACAAGGAGAAGGTATAAGTGAATTAAAGGAAATCTGTGAATC
GAAAAAAGGTACTTTTACAGTTACGTTGAAAGCAAATGAAGAATATGTATTGAATATAAGTGGATTAAAAGTAAAAGATG
GATTTGTAAAAGTGAATTGGCAAGAGAAATAA

Upstream 100 bases:

>100_bases
AACAAAATTCCAATTATTATAGCAGTTGTTATTATGATGCACGTATACATTCCGATATATGTTGTAATACAGTCATTTTT
AAAGAAGGAGTATAAATTAC

Downstream 100 bases:

>100_bases
AAGAGGCCCTGTAAAGGGCCTTTTTCTATTGAATAGTATAAGTAACAGAAAAGCTCACAGGACTATAGTAAACGTAAGGT
GCATGAAATTGAACGTACAT

Product: ECF-type sigma factor negative effector

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 223; Mature: 223

Protein sequence:

>223_residues
MKEFANPFVIFEVAGVTMFLAFIALLICVASWVYTDAKAHQMSKGWSVLAVILPFFIGFLLYMVRRSKKKVEGEYKMNFV
KKQKVTLVAILASTMFVLLSGFTFAQTLDDAWRAGDIYLENEKQGETGYEAKFSSWDIAGKDIELQYDKDTEVTFSYETD
AKRGNLCFSLYERQGEGISELKEICESKKGTFTVTLKANEEYVLNISGLKVKDGFVKVNWQEK

Sequences:

>Translated_223_residues
MKEFANPFVIFEVAGVTMFLAFIALLICVASWVYTDAKAHQMSKGWSVLAVILPFFIGFLLYMVRRSKKKVEGEYKMNFV
KKQKVTLVAILASTMFVLLSGFTFAQTLDDAWRAGDIYLENEKQGETGYEAKFSSWDIAGKDIELQYDKDTEVTFSYETD
AKRGNLCFSLYERQGEGISELKEICESKKGTFTVTLKANEEYVLNISGLKVKDGFVKVNWQEK
>Mature_223_residues
MKEFANPFVIFEVAGVTMFLAFIALLICVASWVYTDAKAHQMSKGWSVLAVILPFFIGFLLYMVRRSKKKVEGEYKMNFV
KKQKVTLVAILASTMFVLLSGFTFAQTLDDAWRAGDIYLENEKQGETGYEAKFSSWDIAGKDIELQYDKDTEVTFSYETD
AKRGNLCFSLYERQGEGISELKEICESKKGTFTVTLKANEEYVLNISGLKVKDGFVKVNWQEK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25392; Mature: 25392

Theoretical pI: Translated: 6.06; Mature: 6.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKEFANPFVIFEVAGVTMFLAFIALLICVASWVYTDAKAHQMSKGWSVLAVILPFFIGFL
CCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHHHH
LYMVRRSKKKVEGEYKMNFVKKQKVTLVAILASTMFVLLSGFTFAQTLDDAWRAGDIYLE
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCEEEE
NEKQGETGYEAKFSSWDIAGKDIELQYDKDTEVTFSYETDAKRGNLCFSLYERQGEGISE
CCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEECCCCCCCCEEEEEHHHCCCCHHH
LKEICESKKGTFTVTLKANEEYVLNISGLKVKDGFVKVNWQEK
HHHHHHCCCCEEEEEEECCCEEEEEECCEEEECCEEEEEECCC
>Mature Secondary Structure
MKEFANPFVIFEVAGVTMFLAFIALLICVASWVYTDAKAHQMSKGWSVLAVILPFFIGFL
CCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHHHH
LYMVRRSKKKVEGEYKMNFVKKQKVTLVAILASTMFVLLSGFTFAQTLDDAWRAGDIYLE
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCEEEE
NEKQGETGYEAKFSSWDIAGKDIELQYDKDTEVTFSYETDAKRGNLCFSLYERQGEGISE
CCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEECCCCCCCCEEEEEHHHCCCCHHH
LKEICESKKGTFTVTLKANEEYVLNISGLKVKDGFVKVNWQEK
HHHHHHCCCCEEEEEEECCCEEEEEECCEEEECCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA