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The map label for this gene is etfB

Identifier: 49481481

GI number: 49481481

Start: 4320559

End: 4321332

Strand: Reverse

Name: etfB

Synonym: BT9727_4258

Alternate gene names: 49481481

Gene position: 4321332-4320559 (Counterclockwise)

Preceding gene: 49481480

Following gene: 49478677

Centisome position: 82.5

GC content: 37.86

Gene sequence:

>774_bases
ATGAACATCTACGTACTCATGAAACGAACATTTGATACAGAAGAAAAAATCGTAATTAAAAACGGTGCAATTTACGATGG
CGAAGCGGAATTCATCATCAACCCTTACGATGAATATGCAATTGAAGAAGCAATTCAAGTAAGAGACGCACAAGGTGGAG
AAGTTACTGTCGTAACAGTTGGTGGCGAAGATAGTGAGAAAGAACTTCGTACGGCGTTAGCGATGGGCTGCGATAAAGCG
GTATTAATTAATATTGAAGATGATGTAGAAAATGGTGACCAGTTTACAACAGCAAAAGTGCTTGCTGAATATTTAAAAGA
TAAAGATGCAGATTTAATTTTAGGCGGAAACGTTGCAATTGATGGTGCATCTGGACAAGTTGGTCCGCGTGTAGCTGAAG
CATTAAATATTCCGTACGTAACGACAATTACAAAACTTGAAATTGTCGGTACAAACGTGAAGATTGAGCGTGATGTTGAA
GGTGATACAGAAGTGATTGAAACTTCATTACCAGTTTTAGTAACAGCACAGCAAGGTTTAAATGAACCCCGTTATCCATC
GCTTCCAGGTATCATGAAAGCGAAGAAAAAGCCACTAGAAGAATTAGAATTAGATGATTTAGATTTAGAAGAAGATGATG
TGGAAGCAAAGACAAAAACAATTGAAATCTATTTGCCTCCTAAGAAAGATGCAGGAAAAGTGTTACAAGGCGAGCTGCAA
GATCAAGTAAAAGAACTTGTATCGTTGCTCCATACAGAAGCGAAAGTAATCTAA

Upstream 100 bases:

>100_bases
GCCTTCATTTAGTGGCAGGTAGTTCAATTATTTTTTTAATATAAATTAACAGAAAATTAAAATTGATAGAATCTTTCTGA
AAAACAAGGGGGTAAATGGA

Downstream 100 bases:

>100_bases
TAAAATACGAAATTATATATGCAGGAGGGAAAATCTATGGCTCGTAAAGTATTAGTAATGGGTGAAGTTCGTGATGGATC
GCTACGTAACGTTTCGTTTG

Product: electron transfer flavoprotein subunit beta (beta-ETF)

Products: NA

Alternate protein names: Beta-ETF; Electron transfer flavoprotein small subunit; ETFSS [H]

Number of amino acids: Translated: 257; Mature: 257

Protein sequence:

>257_residues
MNIYVLMKRTFDTEEKIVIKNGAIYDGEAEFIINPYDEYAIEEAIQVRDAQGGEVTVVTVGGEDSEKELRTALAMGCDKA
VLINIEDDVENGDQFTTAKVLAEYLKDKDADLILGGNVAIDGASGQVGPRVAEALNIPYVTTITKLEIVGTNVKIERDVE
GDTEVIETSLPVLVTAQQGLNEPRYPSLPGIMKAKKKPLEELELDDLDLEEDDVEAKTKTIEIYLPPKKDAGKVLQGELQ
DQVKELVSLLHTEAKVI

Sequences:

>Translated_257_residues
MNIYVLMKRTFDTEEKIVIKNGAIYDGEAEFIINPYDEYAIEEAIQVRDAQGGEVTVVTVGGEDSEKELRTALAMGCDKA
VLINIEDDVENGDQFTTAKVLAEYLKDKDADLILGGNVAIDGASGQVGPRVAEALNIPYVTTITKLEIVGTNVKIERDVE
GDTEVIETSLPVLVTAQQGLNEPRYPSLPGIMKAKKKPLEELELDDLDLEEDDVEAKTKTIEIYLPPKKDAGKVLQGELQ
DQVKELVSLLHTEAKVI
>Mature_257_residues
MNIYVLMKRTFDTEEKIVIKNGAIYDGEAEFIINPYDEYAIEEAIQVRDAQGGEVTVVTVGGEDSEKELRTALAMGCDKA
VLINIEDDVENGDQFTTAKVLAEYLKDKDADLILGGNVAIDGASGQVGPRVAEALNIPYVTTITKLEIVGTNVKIERDVE
GDTEVIETSLPVLVTAQQGLNEPRYPSLPGIMKAKKKPLEELELDDLDLEEDDVEAKTKTIEIYLPPKKDAGKVLQGELQ
DQVKELVSLLHTEAKVI

Specific function: The electron transfer flavoprotein serves as a specific electron acceptor for other dehydrogenases. It transfers the electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase (ETF dehydrogenase) [H]

COG id: COG2086

COG function: function code C; Electron transfer flavoprotein, beta subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ETF beta-subunit/fixA family [H]

Homologues:

Organism=Homo sapiens, GI4503609, Length=237, Percent_Identity=35.0210970464135, Blast_Score=132, Evalue=3e-31,
Organism=Homo sapiens, GI62420877, Length=215, Percent_Identity=35.3488372093023, Blast_Score=125, Evalue=5e-29,
Organism=Escherichia coli, GI2367123, Length=237, Percent_Identity=27.8481012658228, Blast_Score=86, Evalue=3e-18,
Organism=Escherichia coli, GI87081682, Length=258, Percent_Identity=29.4573643410853, Blast_Score=84, Evalue=8e-18,
Organism=Caenorhabditis elegans, GI25141345, Length=239, Percent_Identity=37.2384937238494, Blast_Score=142, Evalue=2e-34,
Organism=Saccharomyces cerevisiae, GI6321646, Length=256, Percent_Identity=34.375, Blast_Score=121, Evalue=1e-28,
Organism=Drosophila melanogaster, GI24651147, Length=236, Percent_Identity=35.1694915254237, Blast_Score=110, Evalue=8e-25,
Organism=Drosophila melanogaster, GI24651145, Length=236, Percent_Identity=35.1694915254237, Blast_Score=110, Evalue=8e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000049
- InterPro:   IPR014730
- InterPro:   IPR012255
- InterPro:   IPR014729 [H]

Pfam domain/function: PF01012 ETF [H]

EC number: NA

Molecular weight: Translated: 28188; Mature: 28188

Theoretical pI: Translated: 4.08; Mature: 4.08

Prosite motif: PS01065 ETF_BETA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIYVLMKRTFDTEEKIVIKNGAIYDGEAEFIINPYDEYAIEEAIQVRDAQGGEVTVVTV
CEEEEEEEECCCCCCEEEEECCEEECCCCCEEECCHHHHHHHHHHHHHCCCCCEEEEEEE
GGEDSEKELRTALAMGCDKAVLINIEDDVENGDQFTTAKVLAEYLKDKDADLILGGNVAI
CCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCEEECCCEEE
DGASGQVGPRVAEALNIPYVTTITKLEIVGTNVKIERDVEGDTEVIETSLPVLVTAQQGL
ECCCCCCCHHHHHHHCCCEEEEEEEEEEEECCEEEEECCCCCHHHHHCCCCEEEEECCCC
NEPRYPSLPGIMKAKKKPLEELELDDLDLEEDDVEAKTKTIEIYLPPKKDAGKVLQGELQ
CCCCCCCCCCHHHHHCCCHHHCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCHHHHHHHH
DQVKELVSLLHTEAKVI
HHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNIYVLMKRTFDTEEKIVIKNGAIYDGEAEFIINPYDEYAIEEAIQVRDAQGGEVTVVTV
CEEEEEEEECCCCCCEEEEECCEEECCCCCEEECCHHHHHHHHHHHHHCCCCCEEEEEEE
GGEDSEKELRTALAMGCDKAVLINIEDDVENGDQFTTAKVLAEYLKDKDADLILGGNVAI
CCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCEEECCCEEE
DGASGQVGPRVAEALNIPYVTTITKLEIVGTNVKIERDVEGDTEVIETSLPVLVTAQQGL
ECCCCCCCHHHHHHHCCCEEEEEEEEEEEECCEEEEECCCCCHHHHHCCCCEEEEECCCC
NEPRYPSLPGIMKAKKKPLEELELDDLDLEEDDVEAKTKTIEIYLPPKKDAGKVLQGELQ
CCCCCCCCCCHHHHHCCCHHHCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCHHHHHHHH
DQVKELVSLLHTEAKVI
HHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969504; 9384377 [H]