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The map label for this gene is yclJ [H]

Identifier: 49481373

GI number: 49481373

Start: 4593193

End: 4593882

Strand: Reverse

Name: yclJ [H]

Synonym: BT9727_4546

Alternate gene names: 49481373

Gene position: 4593882-4593193 (Counterclockwise)

Preceding gene: 49481376

Following gene: 49481372

Centisome position: 87.71

GC content: 34.64

Gene sequence:

>690_bases
ATGGCAAAAAACATTTTAATTGTGGAAGATGAAGATATATTACGTGAAATATTAAAAGACTATTTTTTAAGTGAGCAATA
TGTAGTGTTTGAAGCGAGGGACGGGAAAGAGGCTTTAGTTGTATTTGAAGAAGAAGAGGTTGATTTAGTTATTCTTGATA
TTATGTTGCCGGAACTCGATGGATGGTCTGTTTGCCGAAGAATCCGTAAAACATCCGAAGTTCCTATTATTATGTTGACG
GCACGTGTAGATGAAGATGATACGTTACTTGGATTTGAACTTGGGGCGGATGACTATGTGACGAAGCCATATAGCCCACC
AATTTTATTAGCAAGAGCGAAACGGTTGTTAGAGAGTAGAAAAGTGACAAAGCAACTTTTAGAGAATGAAGATGATATAT
TATCAATCCATGGTATTCATGTTCATTTTCCATCGCGTACTGTTACGGTAGATAAAACAGACATTAATTTAACACATACA
GAATTTGAAATATTAGCGTATTTTATGAAAAATCCAGGAATTGTCTTAACGCGAGAACAATTAATTTCAAGAATTTGGGG
ATATGAATTTGCTGGTGACGACCGAACAGTTAATAGTCATATTCGTAATTTAAGAAATAAATTAGGAGAGAAAGCAAAGT
ACATTACAACTGTAGTACGAACGGGTTATAAATTTGAGGGGAATGTATGA

Upstream 100 bases:

>100_bases
AGGGGATGCGCCAGATAGATATATTATTGAGGCGAAGTTAACTGGTAGTTATTCAAAATGAAATTGTAGTTTCGAAAAGC
GGGAGGGGGATACATAAGTT

Downstream 100 bases:

>100_bases
AAAAAGGGATTGTACTAAAGTTATTTACCCTCACAACAGCGCTATGTATGTTAATTTTAGCGACGATTTTTATTGGACAA
ACGATATTTTTTAAACAATA

Product: DNA-binding response regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 229; Mature: 228

Protein sequence:

>229_residues
MAKNILIVEDEDILREILKDYFLSEQYVVFEARDGKEALVVFEEEEVDLVILDIMLPELDGWSVCRRIRKTSEVPIIMLT
ARVDEDDTLLGFELGADDYVTKPYSPPILLARAKRLLESRKVTKQLLENEDDILSIHGIHVHFPSRTVTVDKTDINLTHT
EFEILAYFMKNPGIVLTREQLISRIWGYEFAGDDRTVNSHIRNLRNKLGEKAKYITTVVRTGYKFEGNV

Sequences:

>Translated_229_residues
MAKNILIVEDEDILREILKDYFLSEQYVVFEARDGKEALVVFEEEEVDLVILDIMLPELDGWSVCRRIRKTSEVPIIMLT
ARVDEDDTLLGFELGADDYVTKPYSPPILLARAKRLLESRKVTKQLLENEDDILSIHGIHVHFPSRTVTVDKTDINLTHT
EFEILAYFMKNPGIVLTREQLISRIWGYEFAGDDRTVNSHIRNLRNKLGEKAKYITTVVRTGYKFEGNV
>Mature_228_residues
AKNILIVEDEDILREILKDYFLSEQYVVFEARDGKEALVVFEEEEVDLVILDIMLPELDGWSVCRRIRKTSEVPIIMLTA
RVDEDDTLLGFELGADDYVTKPYSPPILLARAKRLLESRKVTKQLLENEDDILSIHGIHVHFPSRTVTVDKTDINLTHTE
FEILAYFMKNPGIVLTREQLISRIWGYEFAGDDRTVNSHIRNLRNKLGEKAKYITTVVRTGYKFEGNV

Specific function: Could be member of the two-component regulatory system yclK/yclJ [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1788394, Length=230, Percent_Identity=37.8260869565217, Blast_Score=148, Evalue=3e-37,
Organism=Escherichia coli, GI1786599, Length=230, Percent_Identity=36.5217391304348, Blast_Score=147, Evalue=7e-37,
Organism=Escherichia coli, GI1790863, Length=232, Percent_Identity=36.2068965517241, Blast_Score=140, Evalue=7e-35,
Organism=Escherichia coli, GI87082012, Length=223, Percent_Identity=34.5291479820628, Blast_Score=131, Evalue=3e-32,
Organism=Escherichia coli, GI1787229, Length=231, Percent_Identity=35.9307359307359, Blast_Score=128, Evalue=3e-31,
Organism=Escherichia coli, GI1789809, Length=229, Percent_Identity=32.3144104803493, Blast_Score=123, Evalue=1e-29,
Organism=Escherichia coli, GI1786784, Length=225, Percent_Identity=35.1111111111111, Blast_Score=123, Evalue=1e-29,
Organism=Escherichia coli, GI1786911, Length=225, Percent_Identity=32, Blast_Score=122, Evalue=2e-29,
Organism=Escherichia coli, GI1790860, Length=231, Percent_Identity=34.6320346320346, Blast_Score=118, Evalue=3e-28,
Organism=Escherichia coli, GI2367329, Length=224, Percent_Identity=32.1428571428571, Blast_Score=109, Evalue=2e-25,
Organism=Escherichia coli, GI1787375, Length=227, Percent_Identity=31.2775330396476, Blast_Score=97, Evalue=1e-21,
Organism=Escherichia coli, GI145693140, Length=234, Percent_Identity=32.0512820512821, Blast_Score=95, Evalue=4e-21,
Organism=Escherichia coli, GI1790552, Length=225, Percent_Identity=32.8888888888889, Blast_Score=92, Evalue=2e-20,
Organism=Escherichia coli, GI1789402, Length=223, Percent_Identity=31.390134529148, Blast_Score=87, Evalue=1e-18,
Organism=Escherichia coli, GI1788550, Length=123, Percent_Identity=31.7073170731707, Blast_Score=68, Evalue=4e-13,
Organism=Escherichia coli, GI145693157, Length=100, Percent_Identity=34, Blast_Score=63, Evalue=2e-11,
Organism=Escherichia coli, GI1787487, Length=104, Percent_Identity=32.6923076923077, Blast_Score=61, Evalue=7e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001867
- InterPro:   IPR016032
- InterPro:   IPR001789
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]

EC number: NA

Molecular weight: Translated: 26473; Mature: 26342

Theoretical pI: Translated: 4.78; Mature: 4.78

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKNILIVEDEDILREILKDYFLSEQYVVFEARDGKEALVVFEEEEVDLVILDIMLPELD
CCCCEEEECCHHHHHHHHHHHHCCCCEEEEEECCCCEEEEEEECCCCCEEEEEEECCCCC
GWSVCRRIRKTSEVPIIMLTARVDEDDTLLGFELGADDYVTKPYSPPILLARAKRLLESR
CHHHHHHHHHCCCCCEEEEEEEECCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHH
KVTKQLLENEDDILSIHGIHVHFPSRTVTVDKTDINLTHTEFEILAYFMKNPGIVLTREQ
HHHHHHHCCCCCEEEEEEEEEEECCEEEEEECCCCEEEHHHHHHHHHHHCCCCEEEEHHH
LISRIWGYEFAGDDRTVNSHIRNLRNKLGEKAKYITTVVRTGYKFEGNV
HHHHHCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCC
>Mature Secondary Structure 
AKNILIVEDEDILREILKDYFLSEQYVVFEARDGKEALVVFEEEEVDLVILDIMLPELD
CCCEEEECCHHHHHHHHHHHHCCCCEEEEEECCCCEEEEEEECCCCCEEEEEEECCCCC
GWSVCRRIRKTSEVPIIMLTARVDEDDTLLGFELGADDYVTKPYSPPILLARAKRLLESR
CHHHHHHHHHCCCCCEEEEEEEECCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHH
KVTKQLLENEDDILSIHGIHVHFPSRTVTVDKTDINLTHTEFEILAYFMKNPGIVLTREQ
HHHHHHHCCCCCEEEEEEEEEEECCEEEEEECCCCEEEHHHHHHHHHHHCCCCEEEEHHH
LISRIWGYEFAGDDRTVNSHIRNLRNKLGEKAKYITTVVRTGYKFEGNV
HHHHHCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969502; 9384377 [H]