Click here to switch to the map view.

The map label for this gene is spo0J

Identifier: 49481180

GI number: 49481180

Start: 5228481

End: 5229251

Strand: Reverse

Name: spo0J

Synonym: BT9727_5160

Alternate gene names: 49481180

Gene position: 5229251-5228481 (Counterclockwise)

Preceding gene: 49481157

Following gene: 49481188

Centisome position: 99.84

GC content: 34.5

Gene sequence:

>771_bases
GTGATAACTGAATTAAGGCCGAATCCATATCAACCACGTAAACACTTTAATAAAGAGGCGATTCAGGAATTATCGGCTTC
CATTAAAGAGCACGGCATATTACAACCGTTAATTGCTAGAAAGAGTATTAAAGGCTATGAAATTGTTGCAGGTGAAAGAA
GATATCGTGCTGCTAAAGAAGCAGGACTCGAAAAGGTACCTGCTGTTGTAAGACAATTAAATGAGCAGCAAATGATGGAG
TTTGCATTGCTTGAAAACTTACAGCGAGAAGATTTAAATCCAATGGAAGAAGCAATGGCATACCAAATGTTAATGAACGA
GCTAAATGTGACGCAAGAACAATTAGCAAAACGTCTTGGTAAAAGCAGACCTTACATTGCAAACTATACGCGGTTATTGA
GCCTCCCTTCTTTTGTTCAAGATATGATTGCAAATGGTCAACTTTCAATGGCTCATGGGAGAACCTTGCTTACGATAAAA
GATGAAGAACAATTGAAATCTTTATTGAAAAGAATCGAAAAAGAAGGACTAAATGTTCGTCAATTAGAGAAAATTGTTCA
GGAGATTAATCAAAGCGTTTCACGTGAAACAAAACAAGTGAAAAAAGAGAGAAACATATTTTTCATAGAGCGCGAAACGT
TCTTGAGAGAAAAGTTTGGCACAGATGTGAAAATTAAAGAAACGAAAAAAGAAAAAGGTAAAATCGAAATTGAATTTTTT
AATAAAGAAGATTTAAATCGTATTTTAGAATTATTAGCGCAGAAAAACTAA

Upstream 100 bases:

>100_bases
GCAGAGGAAGTGATTGCAGGTGGCTAAAGGATTAGGAAGAGGAATCAATGTATTTTTTCCTGATTTAGATGTGAAAGAAG
AAGAGACAGTTCAGGAGATT

Downstream 100 bases:

>100_bases
AAAGCAAACCATCTTATTATTTATAGATGGTTTGCTTTTTTTAATGCACATATTTTTTGATCCGTTTCTTTTATACTCTG
TGCGATTACGTCAGCCATTT

Product: stage 0 sporulation protein J

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 256; Mature: 256

Protein sequence:

>256_residues
MITELRPNPYQPRKHFNKEAIQELSASIKEHGILQPLIARKSIKGYEIVAGERRYRAAKEAGLEKVPAVVRQLNEQQMME
FALLENLQREDLNPMEEAMAYQMLMNELNVTQEQLAKRLGKSRPYIANYTRLLSLPSFVQDMIANGQLSMAHGRTLLTIK
DEEQLKSLLKRIEKEGLNVRQLEKIVQEINQSVSRETKQVKKERNIFFIERETFLREKFGTDVKIKETKKEKGKIEIEFF
NKEDLNRILELLAQKN

Sequences:

>Translated_256_residues
MITELRPNPYQPRKHFNKEAIQELSASIKEHGILQPLIARKSIKGYEIVAGERRYRAAKEAGLEKVPAVVRQLNEQQMME
FALLENLQREDLNPMEEAMAYQMLMNELNVTQEQLAKRLGKSRPYIANYTRLLSLPSFVQDMIANGQLSMAHGRTLLTIK
DEEQLKSLLKRIEKEGLNVRQLEKIVQEINQSVSRETKQVKKERNIFFIERETFLREKFGTDVKIKETKKEKGKIEIEFF
NKEDLNRILELLAQKN
>Mature_256_residues
MITELRPNPYQPRKHFNKEAIQELSASIKEHGILQPLIARKSIKGYEIVAGERRYRAAKEAGLEKVPAVVRQLNEQQMME
FALLENLQREDLNPMEEAMAYQMLMNELNVTQEQLAKRLGKSRPYIANYTRLLSLPSFVQDMIANGQLSMAHGRTLLTIK
DEEQLKSLLKRIEKEGLNVRQLEKIVQEINQSVSRETKQVKKERNIFFIERETFLREKFGTDVKIKETKKEKGKIEIEFF
NKEDLNRILELLAQKN

Specific function: Required for the initiation of sporulation and for normal chromosome segregation. Antagonizes sporulation inhibition of soj. It probably interacts with a specific DNA site and other proteins involved in partitioning and cell division, and antagonizes soj

COG id: COG1475

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the parB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004437
- InterPro:   IPR003115
- InterPro:   IPR013741 [H]

Pfam domain/function: PF08535 KorB; PF02195 ParBc [H]

EC number: NA

Molecular weight: Translated: 29969; Mature: 29969

Theoretical pI: Translated: 9.98; Mature: 9.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MITELRPNPYQPRKHFNKEAIQELSASIKEHGILQPLIARKSIKGYEIVAGERRYRAAKE
CCCCCCCCCCCHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHCCCCCEEECCHHHHHHHHH
AGLEKVPAVVRQLNEQQMMEFALLENLQREDLNPMEEAMAYQMLMNELNVTQEQLAKRLG
HCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHC
KSRPYIANYTRLLSLPSFVQDMIANGQLSMAHGRTLLTIKDEEQLKSLLKRIEKEGLNVR
CCCCHHHHHHHHHHHHHHHHHHHCCCCEEECCCCEEEEECCHHHHHHHHHHHHHCCCCHH
QLEKIVQEINQSVSRETKQVKKERNIFFIERETFLREKFGTDVKIKETKKEKGKIEIEFF
HHHHHHHHHHHHHHHHHHHHHHHCCEEEEEHHHHHHHHHCCCCEEEHHHHHCCCEEEEEE
NKEDLNRILELLAQKN
CHHHHHHHHHHHHCCC
>Mature Secondary Structure
MITELRPNPYQPRKHFNKEAIQELSASIKEHGILQPLIARKSIKGYEIVAGERRYRAAKE
CCCCCCCCCCCHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHCCCCCEEECCHHHHHHHHH
AGLEKVPAVVRQLNEQQMMEFALLENLQREDLNPMEEAMAYQMLMNELNVTQEQLAKRLG
HCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHC
KSRPYIANYTRLLSLPSFVQDMIANGQLSMAHGRTLLTIKDEEQLKSLLKRIEKEGLNVR
CCCCHHHHHHHHHHHHHHHHHHHCCCCEEECCCCEEEEECCHHHHHHHHHHHHHCCCCHH
QLEKIVQEINQSVSRETKQVKKERNIFFIERETFLREKFGTDVKIKETKKEKGKIEIEFF
HHHHHHHHHHHHHHHHHHHHHHHCCEEEEEHHHHHHHHHCCCCEEEHHHHHCCCEEEEEE
NKEDLNRILELLAQKN
CHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7584024; 1552862; 9384377; 1900505; 8071208 [H]