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The map label for this gene is yycH [H]

Identifier: 49480467

GI number: 49480467

Start: 5212793

End: 5214109

Strand: Reverse

Name: yycH [H]

Synonym: BT9727_5145

Alternate gene names: 49480467

Gene position: 5214109-5212793 (Counterclockwise)

Preceding gene: 49481209

Following gene: 49480816

Centisome position: 99.55

GC content: 34.09

Gene sequence:

>1317_bases
ATGAGTATGGAAAATGTTAAAACGATAGTTTTAATTAACTTAGTTGTAATTAGTCTATTTCTTACTTTTAACTTATGGAC
GTATGTGCCAGATTCCACGTCTATGCAAAACGCAAAATTTGTACAGGGGAATGAAGGAACTACGCAAACTAAAATCGCTG
ATGTTGTCCGCCCTACTTCTATCATCGTGCATAAAGATAAAAATCATTACGGGAGCAAAAGAGAGGGAGATATAGAATCA
ATCTATAAACCTTTGGAAGCAGGGGAATTACATGAGTTCAAAGAGATATCGATTGCTAAGGCTGACTTCCTTCCTTATGT
GCATGGTGAAGGGAAAATTGAACTTATTTTCCCTACCAATATCCCATTTGATGCAGTTAAATCTATGTTTAGTATGAAAG
AAAAAAGTATAGATAAGCCTAAACACTTTAATCGAATTATTCTTGACCCTTCTAGAAGTAGGGATCAAGAAATTAAAATT
AATTTTGTTTCCGATGGTGATAACTCTAGAATATATGAAGCAAAATTAAGTGGTGTGTATTTAAAAGATATTGTAAATGC
ACAAAATCAATTTATAGTATCAGCGAAACCTTATTTTGACTATCAAATTAATGATATGAAAAAGCTATTTTTACCAGATG
GAACGACAGAATTAAGTAATATAACATATATTTCATCTAATTTAGCGGTTGATACATTTAAGAATGCTCTTTTTAGTGAC
CCACGTTATTTAAGCCCGATTACCGAGCAATCGAAAGAAGTATTTACAGATGGTATTAGGTCTATGGAGATTGAAAACAA
TCAGCATATGCTAAAGTATAAAAATTCTTCCGTTTTAAGTGAGAAAAAGCCAGATAATTTAATGCTTTTACAAAAAAGTT
TTGATTTTGTAAATGGTCACAGTGGAAGCTTGGATTCATATCGTTTGGACTATATGAATAAAGGACAGACAGTCTTCCGC
TTACAGGAAGATGGATATCCCGTATTTAATACAGATGGGTTAGCTGAATTGAGACAAGTATGGGGATCAGAAGAAGTAAT
GGAATATGAAAGATCGTTGCTGTCTTTGAATACGAAAGGTATCGAACAGAAGGTTACTCTCCCATCAGGTCACGTTGTAA
TAGCATCCTTAGAAAATAATGCGGCTGTAGATAAAAGATTCATTAAGGACATTGGGATTGGATACAAATTATCACTAGAT
GGGCAAGTAGCGCGACTACAGCCGATTTGGTATGTAAAGTTTGTTGAAGATGAAGCTGGCAAACAAAAAATATATGAGTG
GAGTGAGGGAGGACTAAATGGATTGGGATCGGATTAA

Upstream 100 bases:

>100_bases
AGGCACATGGTGGCTCGATTTGGGCGAAGAGTGAAGAAGGAAAAGGGACAACGATTTATTTCACATTACCAATGGCAGCG
GATGAAGAGGACGAATGGGA

Downstream 100 bases:

>100_bases
AACCATATTTATTGTGACCTTTTTTGTTTTGGATCTCTTTCTCATTTTTCAATTCATTCAAAAGCAAGATAGTAATCAAT
TGGAGCTTATTGCAGAAACA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 438; Mature: 437

Protein sequence:

>438_residues
MSMENVKTIVLINLVVISLFLTFNLWTYVPDSTSMQNAKFVQGNEGTTQTKIADVVRPTSIIVHKDKNHYGSKREGDIES
IYKPLEAGELHEFKEISIAKADFLPYVHGEGKIELIFPTNIPFDAVKSMFSMKEKSIDKPKHFNRIILDPSRSRDQEIKI
NFVSDGDNSRIYEAKLSGVYLKDIVNAQNQFIVSAKPYFDYQINDMKKLFLPDGTTELSNITYISSNLAVDTFKNALFSD
PRYLSPITEQSKEVFTDGIRSMEIENNQHMLKYKNSSVLSEKKPDNLMLLQKSFDFVNGHSGSLDSYRLDYMNKGQTVFR
LQEDGYPVFNTDGLAELRQVWGSEEVMEYERSLLSLNTKGIEQKVTLPSGHVVIASLENNAAVDKRFIKDIGIGYKLSLD
GQVARLQPIWYVKFVEDEAGKQKIYEWSEGGLNGLGSD

Sequences:

>Translated_438_residues
MSMENVKTIVLINLVVISLFLTFNLWTYVPDSTSMQNAKFVQGNEGTTQTKIADVVRPTSIIVHKDKNHYGSKREGDIES
IYKPLEAGELHEFKEISIAKADFLPYVHGEGKIELIFPTNIPFDAVKSMFSMKEKSIDKPKHFNRIILDPSRSRDQEIKI
NFVSDGDNSRIYEAKLSGVYLKDIVNAQNQFIVSAKPYFDYQINDMKKLFLPDGTTELSNITYISSNLAVDTFKNALFSD
PRYLSPITEQSKEVFTDGIRSMEIENNQHMLKYKNSSVLSEKKPDNLMLLQKSFDFVNGHSGSLDSYRLDYMNKGQTVFR
LQEDGYPVFNTDGLAELRQVWGSEEVMEYERSLLSLNTKGIEQKVTLPSGHVVIASLENNAAVDKRFIKDIGIGYKLSLD
GQVARLQPIWYVKFVEDEAGKQKIYEWSEGGLNGLGSD
>Mature_437_residues
SMENVKTIVLINLVVISLFLTFNLWTYVPDSTSMQNAKFVQGNEGTTQTKIADVVRPTSIIVHKDKNHYGSKREGDIESI
YKPLEAGELHEFKEISIAKADFLPYVHGEGKIELIFPTNIPFDAVKSMFSMKEKSIDKPKHFNRIILDPSRSRDQEIKIN
FVSDGDNSRIYEAKLSGVYLKDIVNAQNQFIVSAKPYFDYQINDMKKLFLPDGTTELSNITYISSNLAVDTFKNALFSDP
RYLSPITEQSKEVFTDGIRSMEIENNQHMLKYKNSSVLSEKKPDNLMLLQKSFDFVNGHSGSLDSYRLDYMNKGQTVFRL
QEDGYPVFNTDGLAELRQVWGSEEVMEYERSLLSLNTKGIEQKVTLPSGHVVIASLENNAAVDKRFIKDIGIGYKLSLDG
QVARLQPIWYVKFVEDEAGKQKIYEWSEGGLNGLGSD

Specific function: Together with yycI, regulates the activity of the two- component system yycF/yycG [H]

COG id: COG4863

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009996 [H]

Pfam domain/function: PF07435 YycH [H]

EC number: NA

Molecular weight: Translated: 49748; Mature: 49617

Theoretical pI: Translated: 5.53; Mature: 5.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSMENVKTIVLINLVVISLFLTFNLWTYVPDSTSMQNAKFVQGNEGTTQTKIADVVRPTS
CCCHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCEEEECCCCCCHHHHHHHHCCCE
IIVHKDKNHYGSKREGDIESIYKPLEAGELHEFKEISIAKADFLPYVHGEGKIELIFPTN
EEEECCCCCCCCCCCCCHHHHHCCCCCCCCHHHHHHEEEHHHCCCEECCCCEEEEEECCC
IPFDAVKSMFSMKEKSIDKPKHFNRIILDPSRSRDQEIKINFVSDGDNSRIYEAKLSGVY
CCHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCEEEEEEEECCCCCEEEEEEECCCH
LKDIVNAQNQFIVSAKPYFDYQINDMKKLFLPDGTTELSNITYISSNLAVDTFKNALFSD
HHHHHCCCCCEEEEECCCCCEEECCCEEEECCCCCCCCCEEEEEECCCCHHHHHHHHHCC
PRYLSPITEQSKEVFTDGIRSMEIENNQHMLKYKNSSVLSEKKPDNLMLLQKSFDFVNGH
CCCCCCHHHHHHHHHHCCHHEEEECCCCEEEEECCCCCCCCCCCCCEEEEEECCCCCCCC
SGSLDSYRLDYMNKGQTVFRLQEDGYPVFNTDGLAELRQVWGSEEVMEYERSLLSLNTKG
CCCCCCEEECCCCCCCEEEEEECCCCCEECCCCHHHHHHHHCCHHHHHHHHHHHHCCCCC
IEQKVTLPSGHVVIASLENNAAVDKRFIKDIGIGYKLSLDGQVARLQPIWYVKFVEDEAG
CCEEEECCCCCEEEEECCCCCHHHHHHHHHCCCCEEEECCCCEEEECEEEEEEEECCCCC
KQKIYEWSEGGLNGLGSD
HHHHHCCCCCCCCCCCCC
>Mature Secondary Structure 
SMENVKTIVLINLVVISLFLTFNLWTYVPDSTSMQNAKFVQGNEGTTQTKIADVVRPTS
CCHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCEEEECCCCCCHHHHHHHHCCCE
IIVHKDKNHYGSKREGDIESIYKPLEAGELHEFKEISIAKADFLPYVHGEGKIELIFPTN
EEEECCCCCCCCCCCCCHHHHHCCCCCCCCHHHHHHEEEHHHCCCEECCCCEEEEEECCC
IPFDAVKSMFSMKEKSIDKPKHFNRIILDPSRSRDQEIKINFVSDGDNSRIYEAKLSGVY
CCHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCEEEEEEEECCCCCEEEEEEECCCH
LKDIVNAQNQFIVSAKPYFDYQINDMKKLFLPDGTTELSNITYISSNLAVDTFKNALFSD
HHHHHCCCCCEEEEECCCCCEEECCCEEEECCCCCCCCCEEEEEECCCCHHHHHHHHHCC
PRYLSPITEQSKEVFTDGIRSMEIENNQHMLKYKNSSVLSEKKPDNLMLLQKSFDFVNGH
CCCCCCHHHHHHHHHHCCHHEEEECCCCEEEEECCCCCCCCCCCCCEEEEEECCCCCCCC
SGSLDSYRLDYMNKGQTVFRLQEDGYPVFNTDGLAELRQVWGSEEVMEYERSLLSLNTKG
CCCCCCEEECCCCCCCEEEEEECCCCCEECCCCHHHHHHHHCCHHHHHHHHHHHHCCCCC
IEQKVTLPSGHVVIASLENNAAVDKRFIKDIGIGYKLSLDGQVARLQPIWYVKFVEDEAG
CCEEEECCCCCEEEEECCCCCHHHHHHHHHCCCCEEEECCCCEEEECEEEEEEEECCCCC
KQKIYEWSEGGLNGLGSD
HHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]